Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.61□□□□□ -1.99
CLDN20P56880 MRPL50P4-201ENST00000446432 475 ntBASIC2.61□□□□□ -1.99
CLDN20P56880 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.61□□□□□ -1.99
CLDN20P56880 RPL23AP49-201ENST00000492925 468 ntBASIC2.61□□□□□ -1.99
CLDN20P56880 GZMAP1-201ENST00000503054 631 ntBASIC2.61□□□□□ -1.99
CLDN20P56880 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.61□□□□□ -1.99
CLDN20P56880 Y_RNA.682-201ENST00000516457 100 ntBASIC2.61□□□□□ -1.99
CLDN20P56880 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.61□□□□□ -1.99
CLDN20P56880 AC104576.1-201ENST00000524225 88 ntBASIC2.61□□□□□ -1.99
CLDN20P56880 AP005639.2-201ENST00000527592 928 ntBASIC2.61□□□□□ -1.99
CLDN20P56880 AC010186.2-204ENST00000537668 439 ntBASIC2.61□□□□□ -1.99
CLDN20P56880 AC107016.2-201ENST00000547968 190 ntBASIC2.61□□□□□ -1.99
CLDN20P56880 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.61□□□□□ -1.99
CLDN20P56880 LARP7P3-201ENST00000579888 337 ntBASIC2.61□□□□□ -1.99
CLDN20P56880 VN1R107P-201ENST00000601784 209 ntBASIC2.61□□□□□ -1.99
CLDN20P56880 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.61□□□□□ -1.99
CLDN20P56880 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.61□□□□□ -1.99
CLDN20P56880 AC090617.7-201ENST00000623952 126 ntBASIC2.61□□□□□ -1.99
CLDN20P56880 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.61□□□□□ -1.99
CLDN20P56880 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.61□□□□□ -1.99
CLDN20P56880 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.61□□□□□ -1.99
CLDN20P56880 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
CLDN20P56880 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.61□□□□□ -1.99
CLDN20P56880 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.61□□□□□ -1.99
CLDN20P56880 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.61□□□□□ -1.99
CLDN20P56880 AL035425.3-201ENST00000564206 4996 ntBASIC2.61□□□□□ -1.99
CLDN20P56880 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.6□□□□□ -1.99
CLDN20P56880 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.6□□□□□ -1.99
CLDN20P56880 RNU6-428P-201ENST00000362942 107 ntBASIC2.6□□□□□ -1.99
CLDN20P56880 RNU6-527P-201ENST00000363425 104 ntBASIC2.6□□□□□ -1.99
CLDN20P56880 RNU6-487P-201ENST00000365430 104 ntBASIC2.6□□□□□ -1.99
CLDN20P56880 RNU6-851P-201ENST00000384565 107 ntBASIC2.6□□□□□ -1.99
CLDN20P56880 RNU6-95P-201ENST00000384697 107 ntBASIC2.6□□□□□ -1.99
CLDN20P56880 MIR147B-201ENST00000390185 80 ntBASIC2.6□□□□□ -1.99
CLDN20P56880 RPS29P13-201ENST00000402041 169 ntBASIC2.6□□□□□ -1.99
CLDN20P56880 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.6□□□□□ -1.99
CLDN20P56880 AC074117.2-201ENST00000417130 397 ntBASIC2.6□□□□□ -1.99
CLDN20P56880 AL591043.1-201ENST00000432461 424 ntBASIC2.6□□□□□ -1.99
CLDN20P56880 RPL23AP58-201ENST00000440453 469 ntBASIC2.6□□□□□ -1.99
CLDN20P56880 AC025750.2-201ENST00000442609 450 ntBASIC2.6□□□□□ -1.99
CLDN20P56880 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.6□□□□□ -1.99
CLDN20P56880 MTND1P17-201ENST00000448961 204 ntBASIC2.6□□□□□ -1.99
CLDN20P56880 AC012308.1-201ENST00000451232 178 ntBASIC2.6□□□□□ -1.99
CLDN20P56880 AC130509.1-201ENST00000464158 433 ntBASIC2.6□□□□□ -1.99
CLDN20P56880 AK3P2-201ENST00000507976 429 ntBASIC2.6□□□□□ -1.99
CLDN20P56880 Y_RNA.691-201ENST00000516611 103 ntBASIC2.6□□□□□ -1.99
CLDN20P56880 AC004486.1-201ENST00000546846 233 ntBASIC2.6□□□□□ -1.99
CLDN20P56880 MIR4790-201ENST00000577799 79 ntBASIC2.6□□□□□ -1.99
CLDN20P56880 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.6□□□□□ -1.99
CLDN20P56880 AC008739.2-201ENST00000597006 317 ntBASIC2.6□□□□□ -1.99
CLDN20P56880 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.6□□□□□ -1.99
CLDN20P56880 AL033523.1-201ENST00000605153 153 ntBASIC2.6□□□□□ -1.99
CLDN20P56880 LARP7P1-201ENST00000605576 316 ntBASIC2.6□□□□□ -1.99
CLDN20P56880 AC104237.2-201ENST00000612456 443 ntBASIC2.6□□□□□ -1.99
CLDN20P56880 Y_RNA.804-201ENST00000615262 101 ntBASIC2.6□□□□□ -1.99
CLDN20P56880 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.6□□□□□ -1.99
CLDN20P56880 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
CLDN20P56880 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CLDN20P56880 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CLDN20P56880 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
CLDN20P56880 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.6□□□□□ -1.99
CLDN20P56880 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.6□□□□□ -1.99
CLDN20P56880 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.59□□□□□ -1.99
CLDN20P56880 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.59□□□□□ -1.99
CLDN20P56880 Y_RNA.263-201ENST00000364659 114 ntBASIC2.59□□□□□ -1.99
CLDN20P56880 RNU6-336P-201ENST00000364891 107 ntBASIC2.59□□□□□ -1.99
CLDN20P56880 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CLDN20P56880 SNORA18.3-201ENST00000384122 132 ntBASIC2.59□□□□□ -1.99
CLDN20P56880 MIR1289-1-201ENST00000408836 144 ntBASIC2.59□□□□□ -1.99
CLDN20P56880 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.59□□□□□ -1.99
CLDN20P56880 AC104332.2-201ENST00000429959 156 ntBASIC2.59□□□□□ -1.99
CLDN20P56880 AC107083.1-201ENST00000439643 279 ntBASIC2.59□□□□□ -1.99
CLDN20P56880 AC093019.1-201ENST00000443135 252 ntBASIC2.59□□□□□ -1.99
CLDN20P56880 AL135938.1-201ENST00000443141 297 ntBASIC2.59□□□□□ -1.99
CLDN20P56880 AC124916.1-201ENST00000444020 547 ntBASIC2.59□□□□□ -1.99
CLDN20P56880 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.59□□□□□ -1.99
CLDN20P56880 AP000705.1-201ENST00000454567 350 ntBASIC2.59□□□□□ -1.99
CLDN20P56880 AC133134.1-201ENST00000466800 359 ntBASIC2.59□□□□□ -1.99
CLDN20P56880 RPL31P41-201ENST00000477967 372 ntBASIC2.59□□□□□ -1.99
CLDN20P56880 AC097462.2-201ENST00000504623 481 ntBASIC2.59□□□□□ -1.99
CLDN20P56880 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC2.59□□□□□ -1.99
CLDN20P56880 MRPS36P2-201ENST00000512569 299 ntBASIC2.59□□□□□ -1.99
CLDN20P56880 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.59□□□□□ -1.99
CLDN20P56880 RNU5B-3P-201ENST00000516601 115 ntBASIC2.59□□□□□ -1.99
CLDN20P56880 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.59□□□□□ -1.99
CLDN20P56880 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.59□□□□□ -1.99
CLDN20P56880 TRAV32-201ENST00000553993 340 ntBASIC2.59□□□□□ -1.99
CLDN20P56880 AC103996.1-201ENST00000555468 102 ntBASIC2.59□□□□□ -1.99
CLDN20P56880 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
CLDN20P56880 MIR3670-2-201ENST00000582974 65 ntBASIC2.59□□□□□ -1.99
CLDN20P56880 MIR3670-1-201ENST00000584160 65 ntBASIC2.59□□□□□ -1.99
CLDN20P56880 MIR3670-3-201ENST00000584855 65 ntBASIC2.59□□□□□ -1.99
CLDN20P56880 AC243960.4-201ENST00000600532 288 ntBASIC2.59□□□□□ -1.99
CLDN20P56880 AC009314.1-201ENST00000603871 304 ntBASIC2.59□□□□□ -1.99
CLDN20P56880 AL137843.1-201ENST00000605078 385 ntBASIC2.59□□□□□ -1.99
CLDN20P56880 RNU6-91P-201ENST00000607774 107 ntBASIC2.59□□□□□ -1.99
CLDN20P56880 AC005046.1-201ENST00000608515 625 ntBASIC2.59□□□□□ -1.99
CLDN20P56880 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
CLDN20P56880 MIR3670-4-201ENST00000612260 65 ntBASIC2.59□□□□□ -1.99
CLDN20P56880 uc_338.14-201ENST00000613162 166 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms