Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.19□□□□□ -1.9
COPB1P53618 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
COPB1P53618 Y_RNA.5-201ENST00000362334 102 ntBASIC3.19□□□□□ -1.9
COPB1P53618 RNU6-1115P-201ENST00000362490 106 ntBASIC3.19□□□□□ -1.9
COPB1P53618 RNU6-1059P-201ENST00000363752 98 ntBASIC3.19□□□□□ -1.9
COPB1P53618 RNU6-270P-201ENST00000364131 105 ntBASIC3.19□□□□□ -1.9
COPB1P53618 RNU6-1040P-201ENST00000383974 107 ntBASIC3.19□□□□□ -1.9
COPB1P53618 Y_RNA.445-201ENST00000384168 102 ntBASIC3.19□□□□□ -1.9
COPB1P53618 MIR517A-201ENST00000385001 87 ntBASIC3.19□□□□□ -1.9
COPB1P53618 SNORA75.6-201ENST00000391318 127 ntBASIC3.19□□□□□ -1.9
COPB1P53618 RN7SKP123-201ENST00000410732 291 ntBASIC3.19□□□□□ -1.9
COPB1P53618 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
COPB1P53618 AC007560.1-201ENST00000426912 237 ntBASIC3.19□□□□□ -1.9
COPB1P53618 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.19□□□□□ -1.9
COPB1P53618 AL049873.1-201ENST00000480540 376 ntBASIC3.19□□□□□ -1.9
COPB1P53618 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.19□□□□□ -1.9
COPB1P53618 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.19□□□□□ -1.9
COPB1P53618 RNA5SP385-201ENST00000515947 110 ntBASIC3.19□□□□□ -1.9
COPB1P53618 RNU1-61P-201ENST00000516107 151 ntBASIC3.19□□□□□ -1.9
COPB1P53618 RNA5SP76-201ENST00000516277 87 ntBASIC3.19□□□□□ -1.9
COPB1P53618 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.19□□□□□ -1.9
COPB1P53618 AMZ2P1-203ENST00000565833 850 ntBASIC3.19□□□□□ -1.9
COPB1P53618 MIR4298-201ENST00000584380 73 ntBASIC3.19□□□□□ -1.9
COPB1P53618 AP000787.2-201ENST00000604432 568 ntBASIC3.19□□□□□ -1.9
COPB1P53618 AC107871.2-201ENST00000612894 502 ntBASIC3.19□□□□□ -1.9
COPB1P53618 AC133104.2-201ENST00000615272 193 ntBASIC3.19□□□□□ -1.9
COPB1P53618 PISRT1.1-201ENST00000616930 107 ntBASIC3.19□□□□□ -1.9
COPB1P53618 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.19□□□□□ -1.9
COPB1P53618 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
COPB1P53618 MTND5P30-201ENST00000452896 1731 ntBASIC3.19□□□□□ -1.9
COPB1P53618 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
COPB1P53618 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.18□□□□□ -1.9
COPB1P53618 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
COPB1P53618 Y_RNA.202-201ENST00000364083 110 ntBASIC3.18□□□□□ -1.9
COPB1P53618 SAR1AP2-201ENST00000392696 594 ntBASIC3.18□□□□□ -1.9
COPB1P53618 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.18□□□□□ -1.9
COPB1P53618 AL117339.3-201ENST00000418733 162 ntBASIC3.18□□□□□ -1.9
COPB1P53618 COTL1P1-201ENST00000422309 375 ntBASIC3.18□□□□□ -1.9
COPB1P53618 AL133396.1-201ENST00000432048 687 ntBASIC3.18□□□□□ -1.9
COPB1P53618 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.18□□□□□ -1.9
COPB1P53618 MTATP6P7-201ENST00000453315 681 ntBASIC3.18□□□□□ -1.9
COPB1P53618 AC013470.1-201ENST00000453438 462 ntBASIC3.18□□□□□ -1.9
COPB1P53618 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.18□□□□□ -1.9
COPB1P53618 AP001486.1-201ENST00000463339 476 ntBASIC3.18□□□□□ -1.9
COPB1P53618 RN7SL504P-201ENST00000494496 287 ntBASIC3.18□□□□□ -1.9
COPB1P53618 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.18□□□□□ -1.9
COPB1P53618 PTP4A1P4-201ENST00000512479 322 ntBASIC3.18□□□□□ -1.9
COPB1P53618 SMURF2P1-201ENST00000514992 481 ntBASIC3.18□□□□□ -1.9
COPB1P53618 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.18□□□□□ -1.9
COPB1P53618 RNA5SP384-201ENST00000516615 116 ntBASIC3.18□□□□□ -1.9
COPB1P53618 RN7SKP272-201ENST00000516988 232 ntBASIC3.18□□□□□ -1.9
COPB1P53618 H3F3AP1-201ENST00000559984 334 ntBASIC3.18□□□□□ -1.9
COPB1P53618 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.18□□□□□ -1.9
COPB1P53618 MIR5004-201ENST00000579078 107 ntBASIC3.18□□□□□ -1.9
COPB1P53618 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.18□□□□□ -1.9
COPB1P53618 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.18□□□□□ -1.9
COPB1P53618 AL360085.1-201ENST00000604713 532 ntBASIC3.18□□□□□ -1.9
COPB1P53618 AL121917.1-203ENST00000605534 577 ntBASIC3.18□□□□□ -1.9
COPB1P53618 AC004832.5-201ENST00000608677 401 ntBASIC3.18□□□□□ -1.9
COPB1P53618 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.18□□□□□ -1.9
COPB1P53618 AC092608.2-201ENST00000624427 218 ntBASIC3.18□□□□□ -1.9
COPB1P53618 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
COPB1P53618 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.18□□□□□ -1.9
COPB1P53618 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
COPB1P53618 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.17□□□□□ -1.9
COPB1P53618 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
COPB1P53618 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
COPB1P53618 AC103988.1-201ENST00000566382 2177 ntBASIC3.17□□□□□ -1.9
COPB1P53618 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.17□□□□□ -1.9
COPB1P53618 Y_RNA.28-201ENST00000362554 111 ntBASIC3.17□□□□□ -1.9
COPB1P53618 SNORA63C-201ENST00000364578 129 ntBASIC3.17□□□□□ -1.9
COPB1P53618 RNU6-596P-201ENST00000365395 98 ntBASIC3.17□□□□□ -1.9
COPB1P53618 SNORA33.2-201ENST00000365413 134 ntBASIC3.17□□□□□ -1.9
COPB1P53618 SNORA22B-201ENST00000383876 138 ntBASIC3.17□□□□□ -1.9
COPB1P53618 RNU6-738P-201ENST00000384531 106 ntBASIC3.17□□□□□ -1.9
COPB1P53618 RNU6-331P-201ENST00000384724 107 ntBASIC3.17□□□□□ -1.9
COPB1P53618 MIR512-1-201ENST00000384913 84 ntBASIC3.17□□□□□ -1.9
COPB1P53618 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
COPB1P53618 RNU6-308P-201ENST00000390957 107 ntBASIC3.17□□□□□ -1.9
COPB1P53618 RNU6-325P-201ENST00000411132 105 ntBASIC3.17□□□□□ -1.9
COPB1P53618 MTND2P23-201ENST00000422990 651 ntBASIC3.17□□□□□ -1.9
COPB1P53618 AC018865.2-201ENST00000423631 129 ntBASIC3.17□□□□□ -1.9
COPB1P53618 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
COPB1P53618 AC093151.1-201ENST00000427711 313 ntBASIC3.17□□□□□ -1.9
COPB1P53618 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
COPB1P53618 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.17□□□□□ -1.9
COPB1P53618 MTND4P19-201ENST00000446659 478 ntBASIC3.17□□□□□ -1.9
COPB1P53618 PCMTD1P1-201ENST00000455560 355 ntBASIC3.17□□□□□ -1.9
COPB1P53618 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
COPB1P53618 MIR2053-201ENST00000459295 91 ntBASIC3.17□□□□□ -1.9
COPB1P53618 AC006445.1-201ENST00000491925 405 ntBASIC3.17□□□□□ -1.9
COPB1P53618 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.17□□□□□ -1.9
COPB1P53618 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.17□□□□□ -1.9
COPB1P53618 RNU6-976P-201ENST00000516086 111 ntBASIC3.17□□□□□ -1.9
COPB1P53618 RNU6-1183P-201ENST00000517054 60 ntBASIC3.17□□□□□ -1.9
COPB1P53618 MTCO3P13-201ENST00000577757 781 ntBASIC3.17□□□□□ -1.9
COPB1P53618 LARP7P3-201ENST00000579888 337 ntBASIC3.17□□□□□ -1.9
COPB1P53618 AL133393.1-201ENST00000603277 287 ntBASIC3.17□□□□□ -1.9
COPB1P53618 AL161629.2-201ENST00000615347 275 ntBASIC3.17□□□□□ -1.9
COPB1P53618 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms