Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 MIR4724-201ENST00000579485 89 ntBASIC4.39□□□□□ -1.71
RNF144AP50876 AL121932.1-201ENST00000605542 214 ntBASIC4.39□□□□□ -1.71
RNF144AP50876 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC4.39□□□□□ -1.71
RNF144AP50876 MIR6730-201ENST00000622213 67 ntBASIC4.39□□□□□ -1.71
RNF144AP50876 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC4.39□□□□□ -1.71
RNF144AP50876 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
RNF144AP50876 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
RNF144AP50876 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RNF144AP50876 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.39□□□□□ -1.71
RNF144AP50876 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
RNF144AP50876 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RNF144AP50876 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RNF144AP50876 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RNF144AP50876 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.38□□□□□ -1.71
RNF144AP50876 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.38□□□□□ -1.71
RNF144AP50876 LINC01355-201ENST00000566551 5444 ntBASIC4.38□□□□□ -1.71
RNF144AP50876 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RNF144AP50876 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.38□□□□□ -1.71
RNF144AP50876 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RNF144AP50876 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RNF144AP50876 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RNF144AP50876 RNU1-94P-201ENST00000362627 173 ntBASIC4.38□□□□□ -1.71
RNF144AP50876 SNORA58B-201ENST00000364259 136 ntBASIC4.38□□□□□ -1.71
RNF144AP50876 SNORA25.7-201ENST00000364375 127 ntBASIC4.38□□□□□ -1.71
RNF144AP50876 RNA5SP515-201ENST00000364570 118 ntBASIC4.38□□□□□ -1.71
RNF144AP50876 Y_RNA.456-201ENST00000384232 111 ntBASIC4.38□□□□□ -1.71
RNF144AP50876 SNORA75.5-201ENST00000391291 81 ntBASIC4.38□□□□□ -1.71
RNF144AP50876 NDUFS5P4-201ENST00000412983 318 ntBASIC4.38□□□□□ -1.71
RNF144AP50876 AC009237.10-201ENST00000414112 510 ntBASIC4.38□□□□□ -1.71
RNF144AP50876 AL158823.1-201ENST00000418441 478 ntBASIC4.38□□□□□ -1.71
RNF144AP50876 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.38□□□□□ -1.71
RNF144AP50876 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.38□□□□□ -1.71
RNF144AP50876 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC4.38□□□□□ -1.71
RNF144AP50876 RPL7AP28-201ENST00000464513 571 ntBASIC4.38□□□□□ -1.71
RNF144AP50876 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
RNF144AP50876 RNU6-168P-201ENST00000516189 101 ntBASIC4.38□□□□□ -1.71
RNF144AP50876 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.38□□□□□ -1.71
RNF144AP50876 Y_RNA.757-201ENST00000578934 114 ntBASIC4.38□□□□□ -1.71
RNF144AP50876 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
RNF144AP50876 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RNF144AP50876 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RNF144AP50876 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
RNF144AP50876 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RNF144AP50876 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RNF144AP50876 NOL8P1-201ENST00000508336 3529 ntBASIC4.37□□□□□ -1.71
RNF144AP50876 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RNF144AP50876 AC092435.4-201ENST00000623012 4159 ntBASIC4.37□□□□□ -1.71
RNF144AP50876 MIR367-201ENST00000362299 68 ntBASIC4.37□□□□□ -1.71
RNF144AP50876 SNORD87-201ENST00000364849 89 ntBASIC4.37□□□□□ -1.71
RNF144AP50876 Y_RNA.294-201ENST00000364916 102 ntBASIC4.37□□□□□ -1.71
RNF144AP50876 RNU6-622P-201ENST00000384272 103 ntBASIC4.37□□□□□ -1.71
RNF144AP50876 MIR195-201ENST00000385194 87 ntBASIC4.37□□□□□ -1.71
RNF144AP50876 RPL23AP48-201ENST00000406913 488 ntBASIC4.37□□□□□ -1.71
RNF144AP50876 AL714022.1-201ENST00000439897 151 ntBASIC4.37□□□□□ -1.71
RNF144AP50876 SNORD108-201ENST00000459332 71 ntBASIC4.37□□□□□ -1.71
RNF144AP50876 S100A11P1-201ENST00000477525 312 ntBASIC4.37□□□□□ -1.71
RNF144AP50876 MIR3923-201ENST00000579521 83 ntBASIC4.37□□□□□ -1.71
RNF144AP50876 MIR4646-201ENST00000580775 63 ntBASIC4.37□□□□□ -1.71
RNF144AP50876 MIR3136-201ENST00000583498 78 ntBASIC4.37□□□□□ -1.71
RNF144AP50876 AC140113.4-201ENST00000622087 222 ntBASIC4.37□□□□□ -1.71
RNF144AP50876 MIR3914-2-201ENST00000637339 95 ntBASIC4.37□□□□□ -1.71
RNF144AP50876 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RNF144AP50876 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
RNF144AP50876 AC087190.4-201ENST00000574616 8334 ntBASIC4.37□□□□□ -1.71
RNF144AP50876 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.37□□□□□ -1.71
RNF144AP50876 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
RNF144AP50876 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
RNF144AP50876 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.36□□□□□ -1.71
RNF144AP50876 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
RNF144AP50876 MAPK10-303ENST00000641324 3959 ntBASIC4.36□□□□□ -1.71
RNF144AP50876 AC068254.2-201ENST00000623938 3577 ntBASIC4.36□□□□□ -1.71
RNF144AP50876 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RNF144AP50876 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RNF144AP50876 Y_RNA.243-201ENST00000364481 109 ntBASIC4.36□□□□□ -1.71
RNF144AP50876 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.36□□□□□ -1.71
RNF144AP50876 CBX3P9-201ENST00000402326 552 ntBASIC4.36□□□□□ -1.71
RNF144AP50876 CYCSP49-201ENST00000420810 319 ntBASIC4.36□□□□□ -1.71
RNF144AP50876 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC4.36□□□□□ -1.71
RNF144AP50876 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.36□□□□□ -1.71
RNF144AP50876 RN7SL817P-201ENST00000480777 288 ntBASIC4.36□□□□□ -1.71
RNF144AP50876 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC4.36□□□□□ -1.71
RNF144AP50876 RPS27AP10-201ENST00000496103 208 ntBASIC4.36□□□□□ -1.71
RNF144AP50876 AIG1P1-201ENST00000503376 148 ntBASIC4.36□□□□□ -1.71
RNF144AP50876 AC090142.3-201ENST00000519012 385 ntBASIC4.36□□□□□ -1.71
RNF144AP50876 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.36□□□□□ -1.71
RNF144AP50876 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.36□□□□□ -1.71
RNF144AP50876 ATP5J2P6-201ENST00000565203 266 ntBASIC4.36□□□□□ -1.71
RNF144AP50876 MIR5699-201ENST00000578903 90 ntBASIC4.36□□□□□ -1.71
RNF144AP50876 MIR3934-201ENST00000579806 107 ntBASIC4.36□□□□□ -1.71
RNF144AP50876 AC108081.1-201ENST00000604358 221 ntBASIC4.36□□□□□ -1.71
RNF144AP50876 SNORD11B-201ENST00000607707 90 ntBASIC4.36□□□□□ -1.71
RNF144AP50876 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RNF144AP50876 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.36□□□□□ -1.71
RNF144AP50876 U6.95-201ENST00000636931 70 ntBASIC4.36□□□□□ -1.71
RNF144AP50876 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RNF144AP50876 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RNF144AP50876 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.36□□□□□ -1.71
RNF144AP50876 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
RNF144AP50876 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.36□□□□□ -1.71
RNF144AP50876 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms