Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 uc_338.32-201ENST00000615087 172 ntBASIC3.71□□□□□ -1.82
GDNFP39905 MIR6780A-201ENST00000615089 68 ntBASIC3.71□□□□□ -1.82
GDNFP39905 AC004467.1-201ENST00000615678 330 ntBASIC3.71□□□□□ -1.82
GDNFP39905 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
GDNFP39905 AC091932.3-201ENST00000624223 323 ntBASIC3.71□□□□□ -1.82
GDNFP39905 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.71□□□□□ -1.82
GDNFP39905 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.71□□□□□ -1.82
GDNFP39905 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.71□□□□□ -1.82
GDNFP39905 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.71□□□□□ -1.82
GDNFP39905 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.71□□□□□ -1.82
GDNFP39905 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
GDNFP39905 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.71□□□□□ -1.82
GDNFP39905 FAM35DP-201ENST00000323387 2712 ntBASIC3.71□□□□□ -1.82
GDNFP39905 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.7□□□□□ -1.82
GDNFP39905 MFSD8-216ENST00000641147 4009 ntBASIC3.7□□□□□ -1.82
GDNFP39905 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
GDNFP39905 AC010332.2-201ENST00000613083 1904 ntBASIC3.7□□□□□ -1.82
GDNFP39905 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
GDNFP39905 AC079741.1-201ENST00000321498 212 ntBASIC3.7□□□□□ -1.82
GDNFP39905 FAR2P2-201ENST00000413041 594 ntBASIC3.7□□□□□ -1.82
GDNFP39905 AC074117.2-201ENST00000417130 397 ntBASIC3.7□□□□□ -1.82
GDNFP39905 AL035461.1-201ENST00000421490 332 ntBASIC3.7□□□□□ -1.82
GDNFP39905 RPEP3-201ENST00000425462 676 ntBASIC3.7□□□□□ -1.82
GDNFP39905 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.7□□□□□ -1.82
GDNFP39905 AP000705.1-201ENST00000454567 350 ntBASIC3.7□□□□□ -1.82
GDNFP39905 SNRPGP5-201ENST00000456003 220 ntBASIC3.7□□□□□ -1.82
GDNFP39905 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.7□□□□□ -1.82
GDNFP39905 RNU6-155P-201ENST00000516347 100 ntBASIC3.7□□□□□ -1.82
GDNFP39905 RNU6-971P-201ENST00000516920 106 ntBASIC3.7□□□□□ -1.82
GDNFP39905 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.7□□□□□ -1.82
GDNFP39905 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.7□□□□□ -1.82
GDNFP39905 AC018448.1-201ENST00000552843 316 ntBASIC3.7□□□□□ -1.82
GDNFP39905 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.7□□□□□ -1.82
GDNFP39905 AL356157.2-201ENST00000605122 111 ntBASIC3.7□□□□□ -1.82
GDNFP39905 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.7□□□□□ -1.82
GDNFP39905 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
GDNFP39905 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
GDNFP39905 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.7□□□□□ -1.82
GDNFP39905 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.7□□□□□ -1.82
GDNFP39905 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.7□□□□□ -1.82
GDNFP39905 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
GDNFP39905 LINC02471-203ENST00000641941 4752 ntBASIC3.7□□□□□ -1.82
GDNFP39905 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
GDNFP39905 AC008568.2-201ENST00000623862 2313 ntBASIC3.7□□□□□ -1.82
GDNFP39905 MTND5P35-201ENST00000557537 1720 ntBASIC3.7□□□□□ -1.82
GDNFP39905 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
GDNFP39905 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
GDNFP39905 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
GDNFP39905 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
GDNFP39905 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.69□□□□□ -1.82
GDNFP39905 RNA5SP443-201ENST00000363083 132 ntBASIC3.69□□□□□ -1.82
GDNFP39905 Y_RNA.273-201ENST00000364703 102 ntBASIC3.69□□□□□ -1.82
GDNFP39905 RNU4-17P-201ENST00000365598 141 ntBASIC3.69□□□□□ -1.82
GDNFP39905 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
GDNFP39905 Y_RNA.498-201ENST00000384460 102 ntBASIC3.69□□□□□ -1.82
GDNFP39905 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
GDNFP39905 RNU6-1199P-201ENST00000411249 104 ntBASIC3.69□□□□□ -1.82
GDNFP39905 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.69□□□□□ -1.82
GDNFP39905 AL356535.1-201ENST00000440335 398 ntBASIC3.69□□□□□ -1.82
GDNFP39905 AL121594.1-201ENST00000475906 575 ntBASIC3.69□□□□□ -1.82
GDNFP39905 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.69□□□□□ -1.82
GDNFP39905 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.69□□□□□ -1.82
GDNFP39905 AC016632.1-201ENST00000503994 196 ntBASIC3.69□□□□□ -1.82
GDNFP39905 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.69□□□□□ -1.82
GDNFP39905 RN7SKP122-201ENST00000515923 296 ntBASIC3.69□□□□□ -1.82
GDNFP39905 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.69□□□□□ -1.82
GDNFP39905 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.69□□□□□ -1.82
GDNFP39905 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
GDNFP39905 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.69□□□□□ -1.82
GDNFP39905 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.69□□□□□ -1.82
GDNFP39905 MIR548X2-201ENST00000579776 100 ntBASIC3.69□□□□□ -1.82
GDNFP39905 AL359881.1-201ENST00000602916 267 ntBASIC3.69□□□□□ -1.82
GDNFP39905 AC110741.2-201ENST00000605278 268 ntBASIC3.69□□□□□ -1.82
GDNFP39905 MIR7702-201ENST00000621931 59 ntBASIC3.69□□□□□ -1.82
GDNFP39905 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.69□□□□□ -1.82
GDNFP39905 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.69□□□□□ -1.82
GDNFP39905 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.69□□□□□ -1.82
GDNFP39905 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
GDNFP39905 NOL8P1-201ENST00000508336 3529 ntBASIC3.69□□□□□ -1.82
GDNFP39905 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.68□□□□□ -1.82
GDNFP39905 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
GDNFP39905 A2MP1-204ENST00000566278 4130 ntBASIC3.68□□□□□ -1.82
GDNFP39905 AC006971.1-201ENST00000407916 4486 ntBASIC3.68□□□□□ -1.82
GDNFP39905 Y_RNA.121-201ENST00000363309 113 ntBASIC3.68□□□□□ -1.82
GDNFP39905 MIR124-3-201ENST00000384866 87 ntBASIC3.68□□□□□ -1.82
GDNFP39905 MIR549A-201ENST00000385268 96 ntBASIC3.68□□□□□ -1.82
GDNFP39905 SNORA40-201ENST00000388090 126 ntBASIC3.68□□□□□ -1.82
GDNFP39905 AL138878.1-201ENST00000405131 347 ntBASIC3.68□□□□□ -1.82
GDNFP39905 AL590139.1-201ENST00000416267 400 ntBASIC3.68□□□□□ -1.82
GDNFP39905 AC092047.1-201ENST00000424997 240 ntBASIC3.68□□□□□ -1.82
GDNFP39905 RAB28P5-201ENST00000427490 651 ntBASIC3.68□□□□□ -1.82
GDNFP39905 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.68□□□□□ -1.82
GDNFP39905 AC112220.1-201ENST00000434628 355 ntBASIC3.68□□□□□ -1.82
GDNFP39905 CR769767.1-201ENST00000436337 346 ntBASIC3.68□□□□□ -1.82
GDNFP39905 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.68□□□□□ -1.82
GDNFP39905 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.68□□□□□ -1.82
GDNFP39905 MTATP6P7-201ENST00000453315 681 ntBASIC3.68□□□□□ -1.82
GDNFP39905 RNU6-1333P-201ENST00000516162 93 ntBASIC3.68□□□□□ -1.82
GDNFP39905 MIR2114-201ENST00000516645 80 ntBASIC3.68□□□□□ -1.82
GDNFP39905 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms