Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
HOXD13P35453 AL136360.1-201ENST00000503377 1900 ntBASIC2.64□□□□□ -1.99
HOXD13P35453 RNU6-1210P-201ENST00000363775 107 ntBASIC2.63□□□□□ -1.99
HOXD13P35453 RNU6-105P-201ENST00000363909 104 ntBASIC2.63□□□□□ -1.99
HOXD13P35453 RNU4-66P-201ENST00000365199 138 ntBASIC2.63□□□□□ -1.99
HOXD13P35453 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
HOXD13P35453 RNU6-1222P-201ENST00000384615 107 ntBASIC2.63□□□□□ -1.99
HOXD13P35453 RNA5SP219-201ENST00000390940 113 ntBASIC2.63□□□□□ -1.99
HOXD13P35453 CALM2P3-201ENST00000400429 449 ntBASIC2.63□□□□□ -1.99
HOXD13P35453 RNU6-1140P-201ENST00000410517 106 ntBASIC2.63□□□□□ -1.99
HOXD13P35453 AC007064.1-201ENST00000412238 351 ntBASIC2.63□□□□□ -1.99
HOXD13P35453 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.63□□□□□ -1.99
HOXD13P35453 AC008267.5-201ENST00000424928 265 ntBASIC2.63□□□□□ -1.99
HOXD13P35453 AC018634.1-201ENST00000437554 401 ntBASIC2.63□□□□□ -1.99
HOXD13P35453 SEPT14P3-201ENST00000439401 183 ntBASIC2.63□□□□□ -1.99
HOXD13P35453 AC007969.2-201ENST00000441891 191 ntBASIC2.63□□□□□ -1.99
HOXD13P35453 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.63□□□□□ -1.99
HOXD13P35453 AL732372.2-207ENST00000445840 183 ntBASIC2.63□□□□□ -1.99
HOXD13P35453 AL031274.1-201ENST00000450334 232 ntBASIC2.63□□□□□ -1.99
HOXD13P35453 SEPT14P2-201ENST00000453405 183 ntBASIC2.63□□□□□ -1.99
HOXD13P35453 MTCO3P38-201ENST00000468910 766 ntBASIC2.63□□□□□ -1.99
HOXD13P35453 RPL30P12-201ENST00000474666 353 ntBASIC2.63□□□□□ -1.99
HOXD13P35453 SEPT14P4-201ENST00000513445 186 ntBASIC2.63□□□□□ -1.99
HOXD13P35453 RNU6-189P-201ENST00000516120 101 ntBASIC2.63□□□□□ -1.99
HOXD13P35453 RNU6-586P-201ENST00000517265 104 ntBASIC2.63□□□□□ -1.99
HOXD13P35453 FO082796.1-201ENST00000523795 183 ntBASIC2.63□□□□□ -1.99
HOXD13P35453 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.63□□□□□ -1.99
HOXD13P35453 MIR4446-201ENST00000578505 67 ntBASIC2.63□□□□□ -1.99
HOXD13P35453 MIR5583-1-201ENST00000580941 59 ntBASIC2.63□□□□□ -1.99
HOXD13P35453 AL162413.1-201ENST00000603198 110 ntBASIC2.63□□□□□ -1.99
HOXD13P35453 AC103810.6-201ENST00000606708 136 ntBASIC2.63□□□□□ -1.99
HOXD13P35453 MIR1291-201ENST00000627649 87 ntBASIC2.63□□□□□ -1.99
HOXD13P35453 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
HOXD13P35453 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
HOXD13P35453 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.63□□□□□ -1.99
HOXD13P35453 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
HOXD13P35453 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.62□□□□□ -1.99
HOXD13P35453 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.62□□□□□ -1.99
HOXD13P35453 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
HOXD13P35453 RNA5SP289-201ENST00000362332 137 ntBASIC2.62□□□□□ -1.99
HOXD13P35453 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.62□□□□□ -1.99
HOXD13P35453 RNU1-138P-201ENST00000384093 164 ntBASIC2.62□□□□□ -1.99
HOXD13P35453 MIR561-201ENST00000385216 97 ntBASIC2.62□□□□□ -1.99
HOXD13P35453 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.62□□□□□ -1.99
HOXD13P35453 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.62□□□□□ -1.99
HOXD13P35453 AL139109.1-201ENST00000455491 297 ntBASIC2.62□□□□□ -1.99
HOXD13P35453 TPTE2P5-203ENST00000458118 728 ntBASIC2.62□□□□□ -1.99
HOXD13P35453 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.62□□□□□ -1.99
HOXD13P35453 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.62□□□□□ -1.99
HOXD13P35453 RNU6-314P-201ENST00000516574 104 ntBASIC2.62□□□□□ -1.99
HOXD13P35453 RNU1-104P-201ENST00000517280 175 ntBASIC2.62□□□□□ -1.99
HOXD13P35453 CENPUP1-201ENST00000526649 1202 ntBASIC2.62□□□□□ -1.99
HOXD13P35453 AC115990.1-201ENST00000526957 301 ntBASIC2.62□□□□□ -1.99
HOXD13P35453 AC090115.3-201ENST00000553218 849 ntBASIC2.62□□□□□ -1.99
HOXD13P35453 OR11H5P-201ENST00000554039 926 ntBASIC2.62□□□□□ -1.99
HOXD13P35453 HMGB1P33-201ENST00000563485 527 ntBASIC2.62□□□□□ -1.99
HOXD13P35453 BNIP3P16-201ENST00000589779 534 ntBASIC2.62□□□□□ -1.99
HOXD13P35453 AC060766.3-201ENST00000591442 263 ntBASIC2.62□□□□□ -1.99
HOXD13P35453 AC064807.4-201ENST00000607201 407 ntBASIC2.62□□□□□ -1.99
HOXD13P35453 AC104237.2-201ENST00000612456 443 ntBASIC2.62□□□□□ -1.99
HOXD13P35453 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.62□□□□□ -1.99
HOXD13P35453 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.62□□□□□ -1.99
HOXD13P35453 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.62□□□□□ -1.99
HOXD13P35453 MAPK10-266ENST00000641066 6555 ntBASIC2.62□□□□□ -1.99
HOXD13P35453 ZNF271P-202ENST00000465539 1970 ntBASIC2.61□□□□□ -1.99
HOXD13P35453 RNU1-72P-201ENST00000362976 153 ntBASIC2.61□□□□□ -1.99
HOXD13P35453 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HOXD13P35453 MIR544A-201ENST00000384855 91 ntBASIC2.61□□□□□ -1.99
HOXD13P35453 CBX3P9-201ENST00000402326 552 ntBASIC2.61□□□□□ -1.99
HOXD13P35453 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.61□□□□□ -1.99
HOXD13P35453 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.61□□□□□ -1.99
HOXD13P35453 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.61□□□□□ -1.99
HOXD13P35453 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.61□□□□□ -1.99
HOXD13P35453 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.61□□□□□ -1.99
HOXD13P35453 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.61□□□□□ -1.99
HOXD13P35453 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.61□□□□□ -1.99
HOXD13P35453 AC019235.1-201ENST00000503847 207 ntBASIC2.61□□□□□ -1.99
HOXD13P35453 AK3P2-201ENST00000507976 429 ntBASIC2.61□□□□□ -1.99
HOXD13P35453 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.61□□□□□ -1.99
HOXD13P35453 SNORA14.1-201ENST00000516113 141 ntBASIC2.61□□□□□ -1.99
HOXD13P35453 RNU6-1281P-201ENST00000516223 105 ntBASIC2.61□□□□□ -1.99
HOXD13P35453 SNORD60.2-201ENST00000516883 86 ntBASIC2.61□□□□□ -1.99
HOXD13P35453 RNU6-835P-201ENST00000516974 104 ntBASIC2.61□□□□□ -1.99
HOXD13P35453 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.61□□□□□ -1.99
HOXD13P35453 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.61□□□□□ -1.99
HOXD13P35453 MIR5194-201ENST00000582634 120 ntBASIC2.61□□□□□ -1.99
HOXD13P35453 AC091135.1-201ENST00000585943 307 ntBASIC2.61□□□□□ -1.99
HOXD13P35453 VN1R107P-201ENST00000601784 209 ntBASIC2.61□□□□□ -1.99
HOXD13P35453 AL713866.2-201ENST00000603579 219 ntBASIC2.61□□□□□ -1.99
HOXD13P35453 AC123912.5-201ENST00000605470 343 ntBASIC2.61□□□□□ -1.99
HOXD13P35453 AC012557.2-201ENST00000605919 418 ntBASIC2.61□□□□□ -1.99
HOXD13P35453 RNU6-85P-201ENST00000605989 107 ntBASIC2.61□□□□□ -1.99
HOXD13P35453 AC097372.5-201ENST00000623665 376 ntBASIC2.61□□□□□ -1.99
HOXD13P35453 AL365361.1-201ENST00000566942 3481 ntBASIC2.61□□□□□ -1.99
HOXD13P35453 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.61□□□□□ -1.99
HOXD13P35453 AP006437.1-201ENST00000641440 3685 ntBASIC2.61□□□□□ -1.99
HOXD13P35453 AC131280.1-202ENST00000624067 4211 ntBASIC2.6□□□□□ -1.99
HOXD13P35453 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HOXD13P35453 RNU1-51P-201ENST00000365345 176 ntBASIC2.6□□□□□ -1.99
HOXD13P35453 RNU1-52P-201ENST00000384190 164 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms