Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 AC010153.1-201ENST00000432862 727 ntBASIC0.92□□□□□ -2.26
COL4A5P29400 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC0.92□□□□□ -2.26
COL4A5P29400 RPL30P6-201ENST00000475925 342 ntBASIC0.92□□□□□ -2.26
COL4A5P29400 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
COL4A5P29400 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC0.92□□□□□ -2.26
COL4A5P29400 MTND1P36-201ENST00000522384 936 ntBASIC0.92□□□□□ -2.26
COL4A5P29400 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.92□□□□□ -2.26
COL4A5P29400 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.92□□□□□ -2.26
COL4A5P29400 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.92□□□□□ -2.26
COL4A5P29400 AC112220.2-201ENST00000605513 533 ntBASIC0.92□□□□□ -2.26
COL4A5P29400 AC006270.3-201ENST00000605967 1036 ntBASIC0.92□□□□□ -2.26
COL4A5P29400 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.92□□□□□ -2.26
COL4A5P29400 AL512427.1-201ENST00000618593 349 ntBASIC0.92□□□□□ -2.26
COL4A5P29400 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
COL4A5P29400 MIR30A-201ENST00000385092 71 ntBASIC0.91□□□□□ -2.26
COL4A5P29400 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.91□□□□□ -2.26
COL4A5P29400 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.91□□□□□ -2.26
COL4A5P29400 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.91□□□□□ -2.26
COL4A5P29400 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC0.91□□□□□ -2.26
COL4A5P29400 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.91□□□□□ -2.26
COL4A5P29400 MTCO2P20-201ENST00000437339 673 ntBASIC0.91□□□□□ -2.26
COL4A5P29400 EEF1E1P1-201ENST00000446998 430 ntBASIC0.91□□□□□ -2.26
COL4A5P29400 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.91□□□□□ -2.26
COL4A5P29400 AC109445.1-201ENST00000512356 383 ntBASIC0.91□□□□□ -2.26
COL4A5P29400 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
COL4A5P29400 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.91□□□□□ -2.26
COL4A5P29400 AC022616.8-201ENST00000533569 253 ntBASIC0.91□□□□□ -2.26
COL4A5P29400 AC233702.2-202ENST00000562547 291 ntBASIC0.91□□□□□ -2.26
COL4A5P29400 AC022254.1-201ENST00000567857 235 ntBASIC0.91□□□□□ -2.26
COL4A5P29400 AC010900.2-201ENST00000604508 210 ntBASIC0.91□□□□□ -2.26
COL4A5P29400 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.91□□□□□ -2.26
COL4A5P29400 AL512506.1-201ENST00000613918 449 ntBASIC0.91□□□□□ -2.26
COL4A5P29400 AC023158.2-201ENST00000614876 543 ntBASIC0.91□□□□□ -2.26
COL4A5P29400 U6.42-201ENST00000618440 107 ntBASIC0.91□□□□□ -2.26
COL4A5P29400 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
COL4A5P29400 SNORD114-2-201ENST00000363953 78 ntBASIC0.91□□□□□ -2.26
COL4A5P29400 RNU6-853P-201ENST00000364306 107 ntBASIC0.91□□□□□ -2.26
COL4A5P29400 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
COL4A5P29400 Y_RNA.390-201ENST00000383932 102 ntBASIC0.91□□□□□ -2.26
COL4A5P29400 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
COL4A5P29400 AL133475.1-201ENST00000404414 305 ntBASIC0.91□□□□□ -2.26
COL4A5P29400 AC000111.3-201ENST00000433478 193 ntBASIC0.91□□□□□ -2.26
COL4A5P29400 MTCO3P5-201ENST00000433620 714 ntBASIC0.91□□□□□ -2.26
COL4A5P29400 AL590365.1-201ENST00000450788 243 ntBASIC0.91□□□□□ -2.26
COL4A5P29400 PTP4A1P4-201ENST00000512479 322 ntBASIC0.91□□□□□ -2.26
COL4A5P29400 MTCYBP43-201ENST00000513621 740 ntBASIC0.91□□□□□ -2.26
COL4A5P29400 RNU2-53P-201ENST00000516257 147 ntBASIC0.91□□□□□ -2.26
COL4A5P29400 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.91□□□□□ -2.26
COL4A5P29400 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
COL4A5P29400 TRAV32-201ENST00000553993 340 ntBASIC0.91□□□□□ -2.26
COL4A5P29400 MTND3P13-201ENST00000574391 343 ntBASIC0.91□□□□□ -2.26
COL4A5P29400 MIR1273C-201ENST00000578669 77 ntBASIC0.91□□□□□ -2.26
COL4A5P29400 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.91□□□□□ -2.26
COL4A5P29400 MIR8074-201ENST00000615081 81 ntBASIC0.91□□□□□ -2.26
COL4A5P29400 AP003476.1-201ENST00000623984 516 ntBASIC0.91□□□□□ -2.26
COL4A5P29400 AC126544.2-201ENST00000625174 749 ntBASIC0.91□□□□□ -2.26
COL4A5P29400 AC008993.2-201ENST00000631744 806 ntBASIC0.91□□□□□ -2.26
COL4A5P29400 RNU6-462P-201ENST00000362659 105 ntBASIC0.9□□□□□ -2.27
COL4A5P29400 SNORD115-3-201ENST00000363100 82 ntBASIC0.9□□□□□ -2.27
COL4A5P29400 SNORA4.3-201ENST00000365564 137 ntBASIC0.9□□□□□ -2.27
COL4A5P29400 RNU6-611P-201ENST00000384276 104 ntBASIC0.9□□□□□ -2.27
COL4A5P29400 SNORD116-12-201ENST00000384468 92 ntBASIC0.9□□□□□ -2.27
COL4A5P29400 MIR1283-2-201ENST00000408621 87 ntBASIC0.9□□□□□ -2.27
COL4A5P29400 AC006366.1-201ENST00000422002 759 ntBASIC0.9□□□□□ -2.27
COL4A5P29400 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.9□□□□□ -2.27
COL4A5P29400 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.9□□□□□ -2.27
COL4A5P29400 ZNF736P5Y-201ENST00000451173 805 ntBASIC0.9□□□□□ -2.27
COL4A5P29400 RNY4P37-201ENST00000516225 96 ntBASIC0.9□□□□□ -2.27
COL4A5P29400 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.9□□□□□ -2.27
COL4A5P29400 AC034114.1-201ENST00000520293 285 ntBASIC0.9□□□□□ -2.27
COL4A5P29400 OR5B19P-201ENST00000531766 928 ntBASIC0.9□□□□□ -2.27
COL4A5P29400 MTND4LP25-201ENST00000570218 163 ntBASIC0.9□□□□□ -2.27
COL4A5P29400 PRR13P7-201ENST00000605538 430 ntBASIC0.9□□□□□ -2.27
COL4A5P29400 AC098614.4-201ENST00000607601 462 ntBASIC0.9□□□□□ -2.27
COL4A5P29400 AC013470.4-201ENST00000619978 986 ntBASIC0.9□□□□□ -2.27
COL4A5P29400 MIR6835-201ENST00000621552 64 ntBASIC0.9□□□□□ -2.27
COL4A5P29400 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
COL4A5P29400 SNORA63.3-201ENST00000362682 132 ntBASIC0.89□□□□□ -2.27
COL4A5P29400 RNU6-1210P-201ENST00000363775 107 ntBASIC0.89□□□□□ -2.27
COL4A5P29400 Y_RNA.518-201ENST00000384552 113 ntBASIC0.89□□□□□ -2.27
COL4A5P29400 AL359634.1-202ENST00000404721 284 ntBASIC0.89□□□□□ -2.27
COL4A5P29400 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.89□□□□□ -2.27
COL4A5P29400 RNA5SP390-201ENST00000410191 113 ntBASIC0.89□□□□□ -2.27
COL4A5P29400 RN7SKP266-201ENST00000410232 287 ntBASIC0.89□□□□□ -2.27
COL4A5P29400 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.89□□□□□ -2.27
COL4A5P29400 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
COL4A5P29400 EIF4EP2-201ENST00000422816 654 ntBASIC0.89□□□□□ -2.27
COL4A5P29400 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.89□□□□□ -2.27
COL4A5P29400 RNU6-333P-201ENST00000459117 107 ntBASIC0.89□□□□□ -2.27
COL4A5P29400 AC136619.2-201ENST00000563361 631 ntBASIC0.89□□□□□ -2.27
COL4A5P29400 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.89□□□□□ -2.27
COL4A5P29400 NDUFA8P1-201ENST00000605525 367 ntBASIC0.89□□□□□ -2.27
COL4A5P29400 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.89□□□□□ -2.27
COL4A5P29400 AL158163.2-201ENST00000619110 700 ntBASIC0.89□□□□□ -2.27
COL4A5P29400 Y_RNA.60-201ENST00000362831 98 ntBASIC0.88□□□□□ -2.27
COL4A5P29400 RNU6-105P-201ENST00000363909 104 ntBASIC0.88□□□□□ -2.27
COL4A5P29400 RNU6-188P-201ENST00000364207 107 ntBASIC0.88□□□□□ -2.27
COL4A5P29400 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
COL4A5P29400 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC0.88□□□□□ -2.27
COL4A5P29400 AL354941.1-201ENST00000438600 464 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms