Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.68□□□□□ -1.98
CAPN3P20807 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CAPN3P20807 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.68□□□□□ -1.98
CAPN3P20807 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CAPN3P20807 RNU4-66P-201ENST00000365199 138 ntBASIC2.68□□□□□ -1.98
CAPN3P20807 Y_RNA.381-201ENST00000365666 102 ntBASIC2.68□□□□□ -1.98
CAPN3P20807 Y_RNA.409-201ENST00000383990 98 ntBASIC2.68□□□□□ -1.98
CAPN3P20807 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
CAPN3P20807 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.68□□□□□ -1.98
CAPN3P20807 AC013470.1-201ENST00000453438 462 ntBASIC2.68□□□□□ -1.98
CAPN3P20807 RNU7-138P-201ENST00000459479 64 ntBASIC2.68□□□□□ -1.98
CAPN3P20807 MTCO3P38-201ENST00000468910 766 ntBASIC2.68□□□□□ -1.98
CAPN3P20807 RPL30P1-201ENST00000488676 339 ntBASIC2.68□□□□□ -1.98
CAPN3P20807 AK3P2-201ENST00000507976 429 ntBASIC2.68□□□□□ -1.98
CAPN3P20807 Y_RNA.693-201ENST00000516641 110 ntBASIC2.68□□□□□ -1.98
CAPN3P20807 AC090115.3-201ENST00000553218 849 ntBASIC2.68□□□□□ -1.98
CAPN3P20807 MIR4446-201ENST00000578505 67 ntBASIC2.68□□□□□ -1.98
CAPN3P20807 MIR4424-201ENST00000585257 86 ntBASIC2.68□□□□□ -1.98
CAPN3P20807 AC123912.5-201ENST00000605470 343 ntBASIC2.68□□□□□ -1.98
CAPN3P20807 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.67□□□□□ -1.98
CAPN3P20807 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CAPN3P20807 AC062016.1-201ENST00000355719 319 ntBASIC2.67□□□□□ -1.98
CAPN3P20807 RNU4-40P-201ENST00000364351 143 ntBASIC2.67□□□□□ -1.98
CAPN3P20807 SNORA70B-201ENST00000384210 135 ntBASIC2.67□□□□□ -1.98
CAPN3P20807 RNU6-293P-201ENST00000411259 106 ntBASIC2.67□□□□□ -1.98
CAPN3P20807 AL139132.1-201ENST00000431587 344 ntBASIC2.67□□□□□ -1.98
CAPN3P20807 RPS15AP10-201ENST00000432472 382 ntBASIC2.67□□□□□ -1.98
CAPN3P20807 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.67□□□□□ -1.98
CAPN3P20807 SEPT14P3-201ENST00000439401 183 ntBASIC2.67□□□□□ -1.98
CAPN3P20807 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.67□□□□□ -1.98
CAPN3P20807 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.67□□□□□ -1.98
CAPN3P20807 AL732372.2-207ENST00000445840 183 ntBASIC2.67□□□□□ -1.98
CAPN3P20807 AC011753.1-201ENST00000451001 220 ntBASIC2.67□□□□□ -1.98
CAPN3P20807 SEPT14P2-201ENST00000453405 183 ntBASIC2.67□□□□□ -1.98
CAPN3P20807 TPTE2P5-203ENST00000458118 728 ntBASIC2.67□□□□□ -1.98
CAPN3P20807 RPS27AP9-201ENST00000477681 438 ntBASIC2.67□□□□□ -1.98
CAPN3P20807 SEPT14P4-201ENST00000513445 186 ntBASIC2.67□□□□□ -1.98
CAPN3P20807 FO082796.1-201ENST00000523795 183 ntBASIC2.67□□□□□ -1.98
CAPN3P20807 CENPUP1-201ENST00000526649 1202 ntBASIC2.67□□□□□ -1.98
CAPN3P20807 AC091544.4-201ENST00000555268 342 ntBASIC2.67□□□□□ -1.98
CAPN3P20807 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.67□□□□□ -1.98
CAPN3P20807 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.67□□□□□ -1.98
CAPN3P20807 MIR5583-1-201ENST00000580941 59 ntBASIC2.67□□□□□ -1.98
CAPN3P20807 AC103987.3-201ENST00000582071 292 ntBASIC2.67□□□□□ -1.98
CAPN3P20807 AC107304.1-201ENST00000604229 296 ntBASIC2.67□□□□□ -1.98
CAPN3P20807 RNU6-85P-201ENST00000605989 107 ntBASIC2.67□□□□□ -1.98
CAPN3P20807 AC245884.12-201ENST00000615364 59 ntBASIC2.67□□□□□ -1.98
CAPN3P20807 AL159153.1-201ENST00000619688 317 ntBASIC2.67□□□□□ -1.98
CAPN3P20807 AC097372.5-201ENST00000623665 376 ntBASIC2.67□□□□□ -1.98
CAPN3P20807 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.67□□□□□ -1.98
CAPN3P20807 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.67□□□□□ -1.98
CAPN3P20807 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
CAPN3P20807 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CAPN3P20807 MIR504-201ENST00000385065 83 ntBASIC2.66□□□□□ -1.98
CAPN3P20807 RNA5SP270-201ENST00000411361 118 ntBASIC2.66□□□□□ -1.98
CAPN3P20807 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.66□□□□□ -1.98
CAPN3P20807 AL117339.3-201ENST00000418733 162 ntBASIC2.66□□□□□ -1.98
CAPN3P20807 AC016907.1-201ENST00000419483 435 ntBASIC2.66□□□□□ -1.98
CAPN3P20807 AC022447.4-201ENST00000504053 364 ntBASIC2.66□□□□□ -1.98
CAPN3P20807 AC009646.1-201ENST00000510455 318 ntBASIC2.66□□□□□ -1.98
CAPN3P20807 SNORA14.1-201ENST00000516113 141 ntBASIC2.66□□□□□ -1.98
CAPN3P20807 CYCSP26-201ENST00000534107 320 ntBASIC2.66□□□□□ -1.98
CAPN3P20807 OR11H5P-201ENST00000554039 926 ntBASIC2.66□□□□□ -1.98
CAPN3P20807 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.66□□□□□ -1.98
CAPN3P20807 ZNF861P-201ENST00000588126 639 ntBASIC2.66□□□□□ -1.98
CAPN3P20807 VN1R80P-201ENST00000597126 338 ntBASIC2.66□□□□□ -1.98
CAPN3P20807 AL162413.1-201ENST00000603198 110 ntBASIC2.66□□□□□ -1.98
CAPN3P20807 AC004492.1-201ENST00000607036 742 ntBASIC2.66□□□□□ -1.98
CAPN3P20807 AC068792.1-201ENST00000621354 417 ntBASIC2.66□□□□□ -1.98
CAPN3P20807 AC099654.12-201ENST00000639868 649 ntBASIC2.66□□□□□ -1.98
CAPN3P20807 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CAPN3P20807 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.66□□□□□ -1.98
CAPN3P20807 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.98
CAPN3P20807 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
CAPN3P20807 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.65□□□□□ -1.99
CAPN3P20807 MIR26A1-201ENST00000362205 77 ntBASIC2.65□□□□□ -1.99
CAPN3P20807 RNU6-1141P-201ENST00000364520 107 ntBASIC2.65□□□□□ -1.99
CAPN3P20807 RNU4-56P-201ENST00000364700 142 ntBASIC2.65□□□□□ -1.99
CAPN3P20807 U3.13-201ENST00000364804 214 ntBASIC2.65□□□□□ -1.99
CAPN3P20807 RNU6-336P-201ENST00000364891 107 ntBASIC2.65□□□□□ -1.99
CAPN3P20807 RNU1-138P-201ENST00000384093 164 ntBASIC2.65□□□□□ -1.99
CAPN3P20807 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CAPN3P20807 POLHP1-201ENST00000411806 470 ntBASIC2.65□□□□□ -1.99
CAPN3P20807 AF274854.1-201ENST00000413236 615 ntBASIC2.65□□□□□ -1.99
CAPN3P20807 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.65□□□□□ -1.99
CAPN3P20807 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.65□□□□□ -1.99
CAPN3P20807 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.65□□□□□ -1.99
CAPN3P20807 AIMP1P2-201ENST00000425294 312 ntBASIC2.65□□□□□ -1.99
CAPN3P20807 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.65□□□□□ -1.99
CAPN3P20807 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CAPN3P20807 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.65□□□□□ -1.99
CAPN3P20807 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC2.65□□□□□ -1.99
CAPN3P20807 AL135938.1-201ENST00000443141 297 ntBASIC2.65□□□□□ -1.99
CAPN3P20807 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.65□□□□□ -1.99
CAPN3P20807 AL109933.2-201ENST00000452651 260 ntBASIC2.65□□□□□ -1.99
CAPN3P20807 Y_RNA.654-201ENST00000497848 106 ntBASIC2.65□□□□□ -1.99
CAPN3P20807 SNORD60.2-201ENST00000516883 86 ntBASIC2.65□□□□□ -1.99
CAPN3P20807 HMGB1P33-201ENST00000563485 527 ntBASIC2.65□□□□□ -1.99
CAPN3P20807 AC092747.3-201ENST00000603769 301 ntBASIC2.65□□□□□ -1.99
CAPN3P20807 SNORD14A-201ENST00000606526 91 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms