Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 RNU2-29P-201ENST00000410423 189 ntBASIC2.01□□□□□ -2.09
XRCC1P18887 MTCO2P11-201ENST00000431069 680 ntBASIC2.01□□□□□ -2.09
XRCC1P18887 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.01□□□□□ -2.09
XRCC1P18887 MTND4P32-201ENST00000437189 1237 ntBASIC2.01□□□□□ -2.09
XRCC1P18887 USP9YP8-201ENST00000441913 500 ntBASIC2.01□□□□□ -2.09
XRCC1P18887 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.01□□□□□ -2.09
XRCC1P18887 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.01□□□□□ -2.09
XRCC1P18887 AL356010.1-201ENST00000456364 102 ntBASIC2.01□□□□□ -2.09
XRCC1P18887 AL162395.1-201ENST00000457882 422 ntBASIC2.01□□□□□ -2.09
XRCC1P18887 RPS29P15-201ENST00000458329 171 ntBASIC2.01□□□□□ -2.09
XRCC1P18887 AP001025.1-201ENST00000486139 332 ntBASIC2.01□□□□□ -2.09
XRCC1P18887 AC140059.1-201ENST00000489238 361 ntBASIC2.01□□□□□ -2.09
XRCC1P18887 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.01□□□□□ -2.09
XRCC1P18887 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.01□□□□□ -2.09
XRCC1P18887 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.01□□□□□ -2.09
XRCC1P18887 RN7SKP298-201ENST00000515950 94 ntBASIC2.01□□□□□ -2.09
XRCC1P18887 RNA5SP364-201ENST00000516938 78 ntBASIC2.01□□□□□ -2.09
XRCC1P18887 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.01□□□□□ -2.09
XRCC1P18887 SUB1P2-201ENST00000556401 297 ntBASIC2.01□□□□□ -2.09
XRCC1P18887 MTCYBP33-201ENST00000575007 1130 ntBASIC2.01□□□□□ -2.09
XRCC1P18887 MIR3941-201ENST00000582572 103 ntBASIC2.01□□□□□ -2.09
XRCC1P18887 MIR3935-201ENST00000583472 104 ntBASIC2.01□□□□□ -2.09
XRCC1P18887 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.01□□□□□ -2.09
XRCC1P18887 AC009314.1-201ENST00000603871 304 ntBASIC2.01□□□□□ -2.09
XRCC1P18887 APOOP1-201ENST00000604695 592 ntBASIC2.01□□□□□ -2.09
XRCC1P18887 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.01□□□□□ -2.09
XRCC1P18887 AC098657.3-201ENST00000620434 263 ntBASIC2.01□□□□□ -2.09
XRCC1P18887 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.01□□□□□ -2.09
XRCC1P18887 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.01□□□□□ -2.09
XRCC1P18887 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2□□□□□ -2.09
XRCC1P18887 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2□□□□□ -2.09
XRCC1P18887 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2□□□□□ -2.09
XRCC1P18887 MIR186-201ENST00000384988 86 ntBASIC2□□□□□ -2.09
XRCC1P18887 MIR561-201ENST00000385216 97 ntBASIC2□□□□□ -2.09
XRCC1P18887 RNU2-2P-201ENST00000410396 191 ntBASIC2□□□□□ -2.09
XRCC1P18887 CYCSP33-201ENST00000414485 327 ntBASIC2□□□□□ -2.09
XRCC1P18887 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2□□□□□ -2.09
XRCC1P18887 MTATP6P18-201ENST00000417994 673 ntBASIC2□□□□□ -2.09
XRCC1P18887 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2□□□□□ -2.09
XRCC1P18887 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2□□□□□ -2.09
XRCC1P18887 HMGB1P31-201ENST00000437242 427 ntBASIC2□□□□□ -2.09
XRCC1P18887 PSPHP1-201ENST00000450062 261 ntBASIC2□□□□□ -2.09
XRCC1P18887 AC079382.1-201ENST00000493346 557 ntBASIC2□□□□□ -2.09
XRCC1P18887 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2□□□□□ -2.09
XRCC1P18887 AC117532.1-201ENST00000514638 323 ntBASIC2□□□□□ -2.09
XRCC1P18887 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2□□□□□ -2.09
XRCC1P18887 RNU6-1178P-201ENST00000516674 107 ntBASIC2□□□□□ -2.09
XRCC1P18887 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2□□□□□ -2.09
XRCC1P18887 AC118273.2-201ENST00000532092 465 ntBASIC2□□□□□ -2.09
XRCC1P18887 CBX3P7-201ENST00000532876 502 ntBASIC2□□□□□ -2.09
XRCC1P18887 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2□□□□□ -2.09
XRCC1P18887 AC090897.2-201ENST00000581715 130 ntBASIC2□□□□□ -2.09
XRCC1P18887 RPL30P11-203ENST00000598995 310 ntBASIC2□□□□□ -2.09
XRCC1P18887 AC098614.4-201ENST00000607601 462 ntBASIC2□□□□□ -2.09
XRCC1P18887 U2.15-201ENST00000611544 191 ntBASIC2□□□□□ -2.09
XRCC1P18887 U2.16-201ENST00000613119 191 ntBASIC2□□□□□ -2.09
XRCC1P18887 U2.12-201ENST00000613778 191 ntBASIC2□□□□□ -2.09
XRCC1P18887 U2.20-201ENST00000613956 192 ntBASIC2□□□□□ -2.09
XRCC1P18887 AC091834.1-201ENST00000614543 472 ntBASIC2□□□□□ -2.09
XRCC1P18887 U2.9-201ENST00000615427 191 ntBASIC2□□□□□ -2.09
XRCC1P18887 MIR6715A-201ENST00000615929 79 ntBASIC2□□□□□ -2.09
XRCC1P18887 U2.11-201ENST00000616345 191 ntBASIC2□□□□□ -2.09
XRCC1P18887 U2.2-201ENST00000616535 191 ntBASIC2□□□□□ -2.09
XRCC1P18887 U2.3-201ENST00000617785 191 ntBASIC2□□□□□ -2.09
XRCC1P18887 U2.19-201ENST00000618602 191 ntBASIC2□□□□□ -2.09
XRCC1P18887 RNU2-1-201ENST00000618664 191 ntBASIC2□□□□□ -2.09
XRCC1P18887 U2.6-201ENST00000619225 191 ntBASIC2□□□□□ -2.09
XRCC1P18887 U2.5-201ENST00000619465 191 ntBASIC2□□□□□ -2.09
XRCC1P18887 U2.10-201ENST00000620268 191 ntBASIC2□□□□□ -2.09
XRCC1P18887 AC007792.1-201ENST00000623023 402 ntBASIC2□□□□□ -2.09
XRCC1P18887 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
XRCC1P18887 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
XRCC1P18887 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
XRCC1P18887 RNU5E-7P-201ENST00000365290 117 ntBASIC1.99□□□□□ -2.09
XRCC1P18887 SNORD116-9-201ENST00000384000 95 ntBASIC1.99□□□□□ -2.09
XRCC1P18887 RNU5A-6P-201ENST00000384136 116 ntBASIC1.99□□□□□ -2.09
XRCC1P18887 RNU6-1103P-201ENST00000384150 107 ntBASIC1.99□□□□□ -2.09
XRCC1P18887 SNORD116-3-201ENST00000384287 95 ntBASIC1.99□□□□□ -2.09
XRCC1P18887 Y_RNA.480-201ENST00000384364 102 ntBASIC1.99□□□□□ -2.09
XRCC1P18887 RNU6-434P-201ENST00000384376 107 ntBASIC1.99□□□□□ -2.09
XRCC1P18887 SNORD116-7-201ENST00000384404 95 ntBASIC1.99□□□□□ -2.09
XRCC1P18887 SNORD116-5-201ENST00000384462 95 ntBASIC1.99□□□□□ -2.09
XRCC1P18887 MIR504-201ENST00000385065 83 ntBASIC1.99□□□□□ -2.09
XRCC1P18887 SNORA46.1-201ENST00000391069 153 ntBASIC1.99□□□□□ -2.09
XRCC1P18887 GSTA9P-201ENST00000406231 611 ntBASIC1.99□□□□□ -2.09
XRCC1P18887 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.99□□□□□ -2.09
XRCC1P18887 RNU2-23P-201ENST00000410545 195 ntBASIC1.99□□□□□ -2.09
XRCC1P18887 RNU2-40P-201ENST00000410833 196 ntBASIC1.99□□□□□ -2.09
XRCC1P18887 AL669831.1-202ENST00000428504 417 ntBASIC1.99□□□□□ -2.09
XRCC1P18887 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.99□□□□□ -2.09
XRCC1P18887 AL358934.1-201ENST00000432346 324 ntBASIC1.99□□□□□ -2.09
XRCC1P18887 HMGN2P3-201ENST00000433603 273 ntBASIC1.99□□□□□ -2.09
XRCC1P18887 HMGN2P5-201ENST00000436882 273 ntBASIC1.99□□□□□ -2.09
XRCC1P18887 GTF2IP13-201ENST00000438487 386 ntBASIC1.99□□□□□ -2.09
XRCC1P18887 AC006512.1-201ENST00000468816 291 ntBASIC1.99□□□□□ -2.09
XRCC1P18887 RPL38P4-201ENST00000502376 214 ntBASIC1.99□□□□□ -2.09
XRCC1P18887 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
XRCC1P18887 AC010424.1-201ENST00000506336 297 ntBASIC1.99□□□□□ -2.09
XRCC1P18887 MTCYBP40-201ENST00000509390 1135 ntBASIC1.99□□□□□ -2.09
XRCC1P18887 RNU2-53P-201ENST00000516257 147 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms