Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.67□□□□□ -1.5
CD44P16070 AC004486.1-201ENST00000546846 233 ntBASIC5.67□□□□□ -1.5
CD44P16070 MIR203B-201ENST00000636080 86 ntBASIC5.67□□□□□ -1.5
CD44P16070 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CD44P16070 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CD44P16070 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC5.67□□□□□ -1.5
CD44P16070 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CD44P16070 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.66□□□□□ -1.5
CD44P16070 AC104623.2-202ENST00000623477 4002 ntBASIC5.66□□□□□ -1.5
CD44P16070 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC5.66□□□□□ -1.5
CD44P16070 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CD44P16070 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CD44P16070 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CD44P16070 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CD44P16070 SNORD115-19-201ENST00000363098 82 ntBASIC5.66□□□□□ -1.5
CD44P16070 SNORD115-18-201ENST00000363293 82 ntBASIC5.66□□□□□ -1.5
CD44P16070 SNORD115-17-201ENST00000364612 82 ntBASIC5.66□□□□□ -1.5
CD44P16070 RNA5SP132-201ENST00000364725 118 ntBASIC5.66□□□□□ -1.5
CD44P16070 Y_RNA.377-201ENST00000365644 108 ntBASIC5.66□□□□□ -1.5
CD44P16070 SNORA2.3-201ENST00000383920 135 ntBASIC5.66□□□□□ -1.5
CD44P16070 Y_RNA.430-201ENST00000384081 110 ntBASIC5.66□□□□□ -1.5
CD44P16070 MIR325-201ENST00000385260 98 ntBASIC5.66□□□□□ -1.5
CD44P16070 AL353813.1-201ENST00000440700 253 ntBASIC5.66□□□□□ -1.5
CD44P16070 RPS4XP11-201ENST00000446897 772 ntBASIC5.66□□□□□ -1.5
CD44P16070 HMGN2P9-201ENST00000476875 229 ntBASIC5.66□□□□□ -1.5
CD44P16070 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.66□□□□□ -1.5
CD44P16070 AC027419.1-201ENST00000522976 328 ntBASIC5.66□□□□□ -1.5
CD44P16070 AC091544.4-201ENST00000555268 342 ntBASIC5.66□□□□□ -1.5
CD44P16070 RPS15AP11-201ENST00000594193 385 ntBASIC5.66□□□□□ -1.5
CD44P16070 AC074101.1-201ENST00000637861 241 ntBASIC5.66□□□□□ -1.5
CD44P16070 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.66□□□□□ -1.5
CD44P16070 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CD44P16070 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CD44P16070 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CD44P16070 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.66□□□□□ -1.5
CD44P16070 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC5.65□□□□□ -1.5
CD44P16070 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.65□□□□□ -1.5
CD44P16070 SMG1P4-204ENST00000523028 4131 ntBASIC5.65□□□□□ -1.5
CD44P16070 RNA5SP235-201ENST00000365411 114 ntBASIC5.65□□□□□ -1.5
CD44P16070 RNU6-217P-201ENST00000384164 104 ntBASIC5.65□□□□□ -1.5
CD44P16070 SNORA17A-201ENST00000391185 133 ntBASIC5.65□□□□□ -1.5
CD44P16070 SNORA70.16-201ENST00000516390 95 ntBASIC5.65□□□□□ -1.5
CD44P16070 RNU2-35P-201ENST00000516446 142 ntBASIC5.65□□□□□ -1.5
CD44P16070 POC1B-211ENST00000549504 581 ntTSL 5 BASIC5.65□□□□□ -1.5
CD44P16070 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.65□□□□□ -1.5
CD44P16070 Y_RNA.773-201ENST00000607168 90 ntBASIC5.65□□□□□ -1.5
CD44P16070 SNORA17.5-201ENST00000630429 132 ntBASIC5.65□□□□□ -1.5
CD44P16070 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CD44P16070 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
CD44P16070 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CD44P16070 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CD44P16070 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
CD44P16070 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
CD44P16070 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CD44P16070 RN7SKP186-201ENST00000365371 303 ntBASIC5.64□□□□□ -1.51
CD44P16070 SNORA2.2-201ENST00000365473 135 ntBASIC5.64□□□□□ -1.51
CD44P16070 SNORA67-201ENST00000384423 137 ntBASIC5.64□□□□□ -1.51
CD44P16070 RPL21P65-201ENST00000406094 466 ntBASIC5.64□□□□□ -1.51
CD44P16070 COX6CP13-201ENST00000428703 226 ntBASIC5.64□□□□□ -1.51
CD44P16070 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC5.64□□□□□ -1.51
CD44P16070 AC145146.1-201ENST00000496370 254 ntBASIC5.64□□□□□ -1.51
CD44P16070 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.64□□□□□ -1.51
CD44P16070 MIR6861-201ENST00000618657 64 ntBASIC5.64□□□□□ -1.51
CD44P16070 AC138965.3-201ENST00000623875 498 ntBASIC5.64□□□□□ -1.51
CD44P16070 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.64□□□□□ -1.51
CD44P16070 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.64□□□□□ -1.51
CD44P16070 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC5.64□□□□□ -1.51
CD44P16070 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
CD44P16070 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
CD44P16070 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CD44P16070 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.64□□□□□ -1.51
CD44P16070 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.64□□□□□ -1.51
CD44P16070 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CD44P16070 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.63□□□□□ -1.51
CD44P16070 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
CD44P16070 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CD44P16070 RN7SKP280-201ENST00000364196 304 ntBASIC5.63□□□□□ -1.51
CD44P16070 SNORA51.4-201ENST00000364993 124 ntBASIC5.63□□□□□ -1.51
CD44P16070 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.63□□□□□ -1.51
CD44P16070 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.63□□□□□ -1.51
CD44P16070 AL450023.3-201ENST00000440592 271 ntBASIC5.63□□□□□ -1.51
CD44P16070 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC5.63□□□□□ -1.51
CD44P16070 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.63□□□□□ -1.51
CD44P16070 RNU1-131P-201ENST00000458943 161 ntBASIC5.63□□□□□ -1.51
CD44P16070 RPS17P2-201ENST00000461663 408 ntBASIC5.63□□□□□ -1.51
CD44P16070 MIR3683-201ENST00000580847 82 ntBASIC5.63□□□□□ -1.51
CD44P16070 ELOCP29-201ENST00000588193 334 ntBASIC5.63□□□□□ -1.51
CD44P16070 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.63□□□□□ -1.51
CD44P16070 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.63□□□□□ -1.51
CD44P16070 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.63□□□□□ -1.51
CD44P16070 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CD44P16070 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
CD44P16070 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CD44P16070 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC5.62□□□□□ -1.51
CD44P16070 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CD44P16070 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CD44P16070 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
CD44P16070 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
CD44P16070 UBBP2-201ENST00000376781 231 ntBASIC5.62□□□□□ -1.51
CD44P16070 RNU6-146P-201ENST00000384602 108 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms