Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.92□□□□□ -1.62
ALDH1A1P00352 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
ALDH1A1P00352 DHX9P1-201ENST00000436565 3076 ntBASIC4.91□□□□□ -1.62
ALDH1A1P00352 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ALDH1A1P00352 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ALDH1A1P00352 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.91□□□□□ -1.62
ALDH1A1P00352 RNU1-20P-201ENST00000363314 162 ntBASIC4.91□□□□□ -1.62
ALDH1A1P00352 RNU6-915P-201ENST00000364943 103 ntBASIC4.91□□□□□ -1.62
ALDH1A1P00352 SNORA73.2-201ENST00000364946 201 ntBASIC4.91□□□□□ -1.62
ALDH1A1P00352 RNU6-1310P-201ENST00000384153 107 ntBASIC4.91□□□□□ -1.62
ALDH1A1P00352 U3.37-201ENST00000408528 213 ntBASIC4.91□□□□□ -1.62
ALDH1A1P00352 AL121914.1-201ENST00000450188 156 ntBASIC4.91□□□□□ -1.62
ALDH1A1P00352 RPL35AP15-201ENST00000468042 339 ntBASIC4.91□□□□□ -1.62
ALDH1A1P00352 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.91□□□□□ -1.62
ALDH1A1P00352 RNA5SP249-201ENST00000516127 99 ntBASIC4.91□□□□□ -1.62
ALDH1A1P00352 RNA5SP54-201ENST00000516951 92 ntBASIC4.91□□□□□ -1.62
ALDH1A1P00352 SNORA70.24-201ENST00000517233 118 ntBASIC4.91□□□□□ -1.62
ALDH1A1P00352 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ALDH1A1P00352 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.91□□□□□ -1.62
ALDH1A1P00352 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.91□□□□□ -1.62
ALDH1A1P00352 MIR4472-2-201ENST00000582069 67 ntBASIC4.91□□□□□ -1.62
ALDH1A1P00352 AC091178.1-203ENST00000584586 279 ntBASIC4.91□□□□□ -1.62
ALDH1A1P00352 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
ALDH1A1P00352 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
ALDH1A1P00352 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
ALDH1A1P00352 PCAT14-202ENST00000627127 3935 ntBASIC4.91□□□□□ -1.62
ALDH1A1P00352 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.9□□□□□ -1.62
ALDH1A1P00352 ASNSP1-201ENST00000518311 1939 ntBASIC4.9□□□□□ -1.62
ALDH1A1P00352 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
ALDH1A1P00352 Y_RNA.24-201ENST00000362508 103 ntBASIC4.9□□□□□ -1.63
ALDH1A1P00352 RNA5SP124-201ENST00000362739 110 ntBASIC4.9□□□□□ -1.63
ALDH1A1P00352 RNU6-588P-201ENST00000410281 105 ntBASIC4.9□□□□□ -1.63
ALDH1A1P00352 SNORA57.3-201ENST00000411095 141 ntBASIC4.9□□□□□ -1.63
ALDH1A1P00352 CKS1BP6-201ENST00000424932 240 ntBASIC4.9□□□□□ -1.63
ALDH1A1P00352 AC079780.1-201ENST00000428259 207 ntBASIC4.9□□□□□ -1.63
ALDH1A1P00352 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.9□□□□□ -1.63
ALDH1A1P00352 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.9□□□□□ -1.63
ALDH1A1P00352 AC107016.1-201ENST00000550463 337 ntBASIC4.9□□□□□ -1.63
ALDH1A1P00352 MIR3936-201ENST00000584304 110 ntBASIC4.9□□□□□ -1.63
ALDH1A1P00352 AL391903.3-201ENST00000612158 163 ntBASIC4.9□□□□□ -1.63
ALDH1A1P00352 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.9□□□□□ -1.63
ALDH1A1P00352 AC073346.2-201ENST00000624724 2058 ntBASIC4.9□□□□□ -1.63
ALDH1A1P00352 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
ALDH1A1P00352 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
ALDH1A1P00352 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
ALDH1A1P00352 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC4.89□□□□□ -1.63
ALDH1A1P00352 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
ALDH1A1P00352 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
ALDH1A1P00352 RNU5F-3P-201ENST00000363767 117 ntBASIC4.89□□□□□ -1.63
ALDH1A1P00352 Y_RNA.179-201ENST00000363844 90 ntBASIC4.89□□□□□ -1.63
ALDH1A1P00352 Y_RNA.294-201ENST00000364916 102 ntBASIC4.89□□□□□ -1.63
ALDH1A1P00352 RPL26P27-201ENST00000414397 437 ntBASIC4.89□□□□□ -1.63
ALDH1A1P00352 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.89□□□□□ -1.63
ALDH1A1P00352 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.89□□□□□ -1.63
ALDH1A1P00352 HSPE1P13-201ENST00000451143 297 ntBASIC4.89□□□□□ -1.63
ALDH1A1P00352 AC006026.2-201ENST00000457376 180 ntBASIC4.89□□□□□ -1.63
ALDH1A1P00352 Y_RNA.651-201ENST00000459380 103 ntBASIC4.89□□□□□ -1.63
ALDH1A1P00352 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC4.89□□□□□ -1.63
ALDH1A1P00352 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.89□□□□□ -1.63
ALDH1A1P00352 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.89□□□□□ -1.63
ALDH1A1P00352 AC110768.1-201ENST00000509222 400 ntBASIC4.89□□□□□ -1.63
ALDH1A1P00352 AC026403.1-201ENST00000518938 295 ntBASIC4.89□□□□□ -1.63
ALDH1A1P00352 AP004607.1-201ENST00000524456 203 ntBASIC4.89□□□□□ -1.63
ALDH1A1P00352 AC015912.2-201ENST00000571053 181 ntBASIC4.89□□□□□ -1.63
ALDH1A1P00352 MIR3121-201ENST00000579680 77 ntBASIC4.89□□□□□ -1.63
ALDH1A1P00352 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.89□□□□□ -1.63
ALDH1A1P00352 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.89□□□□□ -1.63
ALDH1A1P00352 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.89□□□□□ -1.63
ALDH1A1P00352 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
ALDH1A1P00352 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
ALDH1A1P00352 AC027290.2-201ENST00000623210 18662 ntBASIC4.88□□□□□ -1.63
ALDH1A1P00352 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.88□□□□□ -1.63
ALDH1A1P00352 AC099654.7-201ENST00000635788 2127 ntBASIC4.88□□□□□ -1.63
ALDH1A1P00352 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.88□□□□□ -1.63
ALDH1A1P00352 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
ALDH1A1P00352 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
ALDH1A1P00352 RNU6-942P-201ENST00000363002 107 ntBASIC4.88□□□□□ -1.63
ALDH1A1P00352 Y_RNA.116-201ENST00000363292 103 ntBASIC4.88□□□□□ -1.63
ALDH1A1P00352 SNORD73B-201ENST00000364394 72 ntBASIC4.88□□□□□ -1.63
ALDH1A1P00352 Y_RNA.293-201ENST00000364908 93 ntBASIC4.88□□□□□ -1.63
ALDH1A1P00352 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
ALDH1A1P00352 MIR15B-201ENST00000385045 98 ntBASIC4.88□□□□□ -1.63
ALDH1A1P00352 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
ALDH1A1P00352 RNU6-1245P-201ENST00000411130 106 ntBASIC4.88□□□□□ -1.63
ALDH1A1P00352 AC104333.2-201ENST00000422630 192 ntBASIC4.88□□□□□ -1.63
ALDH1A1P00352 AC146507.2-201ENST00000460608 476 ntBASIC4.88□□□□□ -1.63
ALDH1A1P00352 SNORD33.1-201ENST00000516213 88 ntBASIC4.88□□□□□ -1.63
ALDH1A1P00352 RNU6-1256P-201ENST00000516539 103 ntBASIC4.88□□□□□ -1.63
ALDH1A1P00352 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.88□□□□□ -1.63
ALDH1A1P00352 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.88□□□□□ -1.63
ALDH1A1P00352 AC009093.8-201ENST00000641769 292 ntBASIC4.88□□□□□ -1.63
ALDH1A1P00352 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
ALDH1A1P00352 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.88□□□□□ -1.63
ALDH1A1P00352 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
ALDH1A1P00352 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
ALDH1A1P00352 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
ALDH1A1P00352 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
ALDH1A1P00352 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
ALDH1A1P00352 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.87□□□□□ -1.63
ALDH1A1P00352 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms