Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.66□□□□□ -1.66
GFRA3O60609 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
GFRA3O60609 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
GFRA3O60609 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
GFRA3O60609 RN7SKP185-201ENST00000362813 326 ntBASIC4.66□□□□□ -1.66
GFRA3O60609 RNU6-1099P-201ENST00000363533 107 ntBASIC4.66□□□□□ -1.66
GFRA3O60609 SNORA26.3-201ENST00000391119 136 ntBASIC4.66□□□□□ -1.66
GFRA3O60609 Y_RNA.620-201ENST00000411009 88 ntBASIC4.66□□□□□ -1.66
GFRA3O60609 Z92545.1-201ENST00000411782 234 ntBASIC4.66□□□□□ -1.66
GFRA3O60609 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.66□□□□□ -1.66
GFRA3O60609 AC017078.1-201ENST00000416146 368 ntBASIC4.66□□□□□ -1.66
GFRA3O60609 BTF3P4-201ENST00000418852 495 ntBASIC4.66□□□□□ -1.66
GFRA3O60609 RPS29P7-201ENST00000439662 171 ntBASIC4.66□□□□□ -1.66
GFRA3O60609 BX276092.4-201ENST00000452056 248 ntBASIC4.66□□□□□ -1.66
GFRA3O60609 AC006026.2-201ENST00000457376 180 ntBASIC4.66□□□□□ -1.66
GFRA3O60609 RNU6-437P-201ENST00000459408 95 ntBASIC4.66□□□□□ -1.66
GFRA3O60609 RN7SL197P-201ENST00000466981 299 ntBASIC4.66□□□□□ -1.66
GFRA3O60609 RFPL4AP5-201ENST00000514977 504 ntBASIC4.66□□□□□ -1.66
GFRA3O60609 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.66□□□□□ -1.66
GFRA3O60609 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.66□□□□□ -1.66
GFRA3O60609 YPEL5P2-201ENST00000605553 359 ntBASIC4.66□□□□□ -1.66
GFRA3O60609 AC012531.4-201ENST00000616509 177 ntBASIC4.66□□□□□ -1.66
GFRA3O60609 AL162726.3-218ENST00000636401 95 ntBASIC4.66□□□□□ -1.66
GFRA3O60609 AC125257.1-201ENST00000560400 2930 ntBASIC4.66□□□□□ -1.66
GFRA3O60609 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
GFRA3O60609 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
GFRA3O60609 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
GFRA3O60609 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
GFRA3O60609 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.66□□□□□ -1.66
GFRA3O60609 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
GFRA3O60609 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
GFRA3O60609 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
GFRA3O60609 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
GFRA3O60609 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
GFRA3O60609 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
GFRA3O60609 AC073346.2-201ENST00000624724 2058 ntBASIC4.65□□□□□ -1.66
GFRA3O60609 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
GFRA3O60609 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.65□□□□□ -1.67
GFRA3O60609 Y_RNA.213-201ENST00000364178 111 ntBASIC4.65□□□□□ -1.67
GFRA3O60609 RNU4-41P-201ENST00000364426 143 ntBASIC4.65□□□□□ -1.67
GFRA3O60609 SNORD87-201ENST00000364849 89 ntBASIC4.65□□□□□ -1.67
GFRA3O60609 RNA5SP223-201ENST00000365174 120 ntBASIC4.65□□□□□ -1.67
GFRA3O60609 RNU6-1323P-201ENST00000384025 107 ntBASIC4.65□□□□□ -1.67
GFRA3O60609 RNU6-409P-201ENST00000384114 104 ntBASIC4.65□□□□□ -1.67
GFRA3O60609 MIR544A-201ENST00000384855 91 ntBASIC4.65□□□□□ -1.67
GFRA3O60609 Z85995.1-201ENST00000415547 335 ntBASIC4.65□□□□□ -1.67
GFRA3O60609 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.65□□□□□ -1.67
GFRA3O60609 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC4.65□□□□□ -1.67
GFRA3O60609 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC4.65□□□□□ -1.67
GFRA3O60609 LINC02210-201ENST00000444561 288 ntBASIC4.65□□□□□ -1.67
GFRA3O60609 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.65□□□□□ -1.67
GFRA3O60609 RN7SL98P-201ENST00000462271 300 ntBASIC4.65□□□□□ -1.67
GFRA3O60609 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.65□□□□□ -1.67
GFRA3O60609 AC110768.1-201ENST00000509222 400 ntBASIC4.65□□□□□ -1.67
GFRA3O60609 RN7SKP277-201ENST00000516895 283 ntBASIC4.65□□□□□ -1.67
GFRA3O60609 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.65□□□□□ -1.67
GFRA3O60609 AC007751.1-201ENST00000529260 376 ntBASIC4.65□□□□□ -1.67
GFRA3O60609 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.65□□□□□ -1.67
GFRA3O60609 AC015914.2-201ENST00000618167 288 ntBASIC4.65□□□□□ -1.67
GFRA3O60609 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
GFRA3O60609 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.65□□□□□ -1.67
GFRA3O60609 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.65□□□□□ -1.67
GFRA3O60609 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
GFRA3O60609 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.65□□□□□ -1.67
GFRA3O60609 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.65□□□□□ -1.67
GFRA3O60609 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
GFRA3O60609 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC4.65□□□□□ -1.67
GFRA3O60609 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.64□□□□□ -1.67
GFRA3O60609 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
GFRA3O60609 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.64□□□□□ -1.67
GFRA3O60609 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
GFRA3O60609 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC4.64□□□□□ -1.67
GFRA3O60609 ZFRP1-201ENST00000457579 2970 ntBASIC4.64□□□□□ -1.67
GFRA3O60609 SNORD56.1-201ENST00000362913 68 ntBASIC4.64□□□□□ -1.67
GFRA3O60609 AC004941.2-201ENST00000427009 228 ntBASIC4.64□□□□□ -1.67
GFRA3O60609 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.64□□□□□ -1.67
GFRA3O60609 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC4.64□□□□□ -1.67
GFRA3O60609 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC4.64□□□□□ -1.67
GFRA3O60609 AL049874.1-201ENST00000489560 388 ntBASIC4.64□□□□□ -1.67
GFRA3O60609 IGKV2D-19-201ENST00000523346 262 ntBASIC4.64□□□□□ -1.67
GFRA3O60609 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.64□□□□□ -1.67
GFRA3O60609 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC4.64□□□□□ -1.67
GFRA3O60609 AC140479.6-201ENST00000633535 357 ntBASIC4.64□□□□□ -1.67
GFRA3O60609 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
GFRA3O60609 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
GFRA3O60609 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
GFRA3O60609 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
GFRA3O60609 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
GFRA3O60609 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
GFRA3O60609 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
GFRA3O60609 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.64□□□□□ -1.67
GFRA3O60609 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
GFRA3O60609 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.63□□□□□ -1.67
GFRA3O60609 AC026523.2-201ENST00000625039 7739 ntBASIC4.63□□□□□ -1.67
GFRA3O60609 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
GFRA3O60609 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
GFRA3O60609 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
GFRA3O60609 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
GFRA3O60609 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
GFRA3O60609 AP002088.1-201ENST00000382740 395 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms