Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.27□□□□□ -1.89
FOXN3O00409 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.27□□□□□ -1.89
FOXN3O00409 RPS15AP10-201ENST00000432472 382 ntBASIC3.27□□□□□ -1.89
FOXN3O00409 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.27□□□□□ -1.89
FOXN3O00409 Y_RNA.635-201ENST00000459041 101 ntBASIC3.27□□□□□ -1.89
FOXN3O00409 RPL21P39-201ENST00000463605 483 ntBASIC3.27□□□□□ -1.89
FOXN3O00409 AC087190.1-201ENST00000484462 480 ntBASIC3.27□□□□□ -1.89
FOXN3O00409 AC093591.1-201ENST00000491435 481 ntBASIC3.27□□□□□ -1.89
FOXN3O00409 RPL21P16-201ENST00000495531 483 ntBASIC3.27□□□□□ -1.89
FOXN3O00409 RN7SKP24-201ENST00000515888 284 ntBASIC3.27□□□□□ -1.89
FOXN3O00409 SNORA25.11-201ENST00000515935 105 ntBASIC3.27□□□□□ -1.89
FOXN3O00409 SNORD19.2-201ENST00000516978 73 ntBASIC3.27□□□□□ -1.89
FOXN3O00409 AP005639.2-201ENST00000527592 928 ntBASIC3.27□□□□□ -1.89
FOXN3O00409 MIR4506-201ENST00000584693 77 ntBASIC3.27□□□□□ -1.89
FOXN3O00409 AP000787.2-201ENST00000604432 568 ntBASIC3.27□□□□□ -1.89
FOXN3O00409 AL161756.2-201ENST00000604597 246 ntBASIC3.27□□□□□ -1.89
FOXN3O00409 AL360085.1-201ENST00000604713 532 ntBASIC3.27□□□□□ -1.89
FOXN3O00409 AC007318.2-201ENST00000620999 243 ntBASIC3.27□□□□□ -1.89
FOXN3O00409 AC090971.5-201ENST00000621102 293 ntBASIC3.27□□□□□ -1.89
FOXN3O00409 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.27□□□□□ -1.89
FOXN3O00409 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
FOXN3O00409 RBBP8P1-201ENST00000449447 1844 ntBASIC3.26□□□□□ -1.89
FOXN3O00409 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.26□□□□□ -1.89
FOXN3O00409 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.26□□□□□ -1.89
FOXN3O00409 AC073325.2-201ENST00000339545 159 ntBASIC3.26□□□□□ -1.89
FOXN3O00409 RNA5SP72-201ENST00000364442 117 ntBASIC3.26□□□□□ -1.89
FOXN3O00409 RNU6-336P-201ENST00000364891 107 ntBASIC3.26□□□□□ -1.89
FOXN3O00409 RNU1-140P-201ENST00000365040 165 ntBASIC3.26□□□□□ -1.89
FOXN3O00409 RNU6-790P-201ENST00000384479 105 ntBASIC3.26□□□□□ -1.89
FOXN3O00409 RNU6-306P-201ENST00000384617 107 ntBASIC3.26□□□□□ -1.89
FOXN3O00409 RNU6-95P-201ENST00000384697 107 ntBASIC3.26□□□□□ -1.89
FOXN3O00409 U3.19-201ENST00000390893 196 ntBASIC3.26□□□□□ -1.89
FOXN3O00409 RNU6-293P-201ENST00000411259 106 ntBASIC3.26□□□□□ -1.89
FOXN3O00409 AL117339.3-201ENST00000418733 162 ntBASIC3.26□□□□□ -1.89
FOXN3O00409 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.26□□□□□ -1.89
FOXN3O00409 MTND2P23-201ENST00000422990 651 ntBASIC3.26□□□□□ -1.89
FOXN3O00409 UBE2V1P4-201ENST00000425374 344 ntBASIC3.26□□□□□ -1.89
FOXN3O00409 Z82205.1-201ENST00000428456 297 ntBASIC3.26□□□□□ -1.89
FOXN3O00409 AC107399.1-201ENST00000451226 265 ntBASIC3.26□□□□□ -1.89
FOXN3O00409 RNU7-187P-201ENST00000458985 68 ntBASIC3.26□□□□□ -1.89
FOXN3O00409 AP001324.2-201ENST00000461163 319 ntBASIC3.26□□□□□ -1.89
FOXN3O00409 AC027575.1-201ENST00000481064 460 ntBASIC3.26□□□□□ -1.89
FOXN3O00409 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.26□□□□□ -1.89
FOXN3O00409 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.26□□□□□ -1.89
FOXN3O00409 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.26□□□□□ -1.89
FOXN3O00409 RN7SKP43-201ENST00000516173 320 ntBASIC3.26□□□□□ -1.89
FOXN3O00409 AC020661.2-201ENST00000560114 134 ntBASIC3.26□□□□□ -1.89
FOXN3O00409 SRGNP1-201ENST00000603392 451 ntBASIC3.26□□□□□ -1.89
FOXN3O00409 AL160281.1-201ENST00000605307 311 ntBASIC3.26□□□□□ -1.89
FOXN3O00409 AC080078.3-201ENST00000605407 463 ntBASIC3.26□□□□□ -1.89
FOXN3O00409 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.26□□□□□ -1.89
FOXN3O00409 AC084757.4-201ENST00000616350 526 ntBASIC3.26□□□□□ -1.89
FOXN3O00409 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
FOXN3O00409 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.25□□□□□ -1.89
FOXN3O00409 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.25□□□□□ -1.89
FOXN3O00409 Y_RNA.151-201ENST00000363566 112 ntBASIC3.25□□□□□ -1.89
FOXN3O00409 RNU6-933P-201ENST00000384424 107 ntBASIC3.25□□□□□ -1.89
FOXN3O00409 MIR34B-201ENST00000385076 84 ntBASIC3.25□□□□□ -1.89
FOXN3O00409 SNORA75.4-201ENST00000391278 119 ntBASIC3.25□□□□□ -1.89
FOXN3O00409 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
FOXN3O00409 AL360182.1-201ENST00000397433 468 ntBASIC3.25□□□□□ -1.89
FOXN3O00409 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
FOXN3O00409 MIR887-201ENST00000401258 79 ntBASIC3.25□□□□□ -1.89
FOXN3O00409 MTCYBP4-201ENST00000401524 249 ntBASIC3.25□□□□□ -1.89
FOXN3O00409 MIR548K-201ENST00000408406 116 ntBASIC3.25□□□□□ -1.89
FOXN3O00409 RNU6-1140P-201ENST00000410517 106 ntBASIC3.25□□□□□ -1.89
FOXN3O00409 RNU6-1245P-201ENST00000411130 106 ntBASIC3.25□□□□□ -1.89
FOXN3O00409 AC138623.1-201ENST00000418060 216 ntBASIC3.25□□□□□ -1.89
FOXN3O00409 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.25□□□□□ -1.89
FOXN3O00409 AL358075.3-201ENST00000426289 226 ntBASIC3.25□□□□□ -1.89
FOXN3O00409 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.25□□□□□ -1.89
FOXN3O00409 SNAP23P1-201ENST00000433229 246 ntBASIC3.25□□□□□ -1.89
FOXN3O00409 RPL23AP83-201ENST00000434984 473 ntBASIC3.25□□□□□ -1.89
FOXN3O00409 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
FOXN3O00409 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.25□□□□□ -1.89
FOXN3O00409 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.25□□□□□ -1.89
FOXN3O00409 RNU6-1037P-201ENST00000459571 107 ntBASIC3.25□□□□□ -1.89
FOXN3O00409 RPL27AP5-201ENST00000469428 449 ntBASIC3.25□□□□□ -1.89
FOXN3O00409 RPS27P27-201ENST00000498779 255 ntBASIC3.25□□□□□ -1.89
FOXN3O00409 AC005741.1-201ENST00000511094 432 ntBASIC3.25□□□□□ -1.89
FOXN3O00409 Y_RNA.718-201ENST00000517110 102 ntBASIC3.25□□□□□ -1.89
FOXN3O00409 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.25□□□□□ -1.89
FOXN3O00409 AL442663.2-201ENST00000554385 511 ntBASIC3.25□□□□□ -1.89
FOXN3O00409 MIR5004-201ENST00000579078 107 ntBASIC3.25□□□□□ -1.89
FOXN3O00409 AC011471.1-201ENST00000585766 187 ntBASIC3.25□□□□□ -1.89
FOXN3O00409 YPEL5P2-201ENST00000605553 359 ntBASIC3.25□□□□□ -1.89
FOXN3O00409 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.25□□□□□ -1.89
FOXN3O00409 AC040896.1-201ENST00000613819 479 ntBASIC3.25□□□□□ -1.89
FOXN3O00409 MIR6128-201ENST00000615528 109 ntBASIC3.25□□□□□ -1.89
FOXN3O00409 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
FOXN3O00409 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.24□□□□□ -1.89
FOXN3O00409 MIR22-201ENST00000362190 85 ntBASIC3.24□□□□□ -1.89
FOXN3O00409 RNU6-105P-201ENST00000363909 104 ntBASIC3.24□□□□□ -1.89
FOXN3O00409 RNU6-1317P-201ENST00000364582 104 ntBASIC3.24□□□□□ -1.89
FOXN3O00409 Y_RNA.339-201ENST00000365325 102 ntBASIC3.24□□□□□ -1.89
FOXN3O00409 U8.9-201ENST00000365667 134 ntBASIC3.24□□□□□ -1.89
FOXN3O00409 RNU6-474P-201ENST00000384243 107 ntBASIC3.24□□□□□ -1.89
FOXN3O00409 SNORA54-201ENST00000384281 123 ntBASIC3.24□□□□□ -1.89
FOXN3O00409 RNU6-692P-201ENST00000384496 107 ntBASIC3.24□□□□□ -1.89
FOXN3O00409 RNU6-308P-201ENST00000390957 107 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms