Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC099654.9-201ENST00000637055 678 ntBASIC0.03□□□□□ -2.4
CHKB-CPT1BH3BT56 RNU6-1123P-201ENST00000362347 106 ntBASIC0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 RNU6-942P-201ENST00000363002 107 ntBASIC0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 RNU6-622P-201ENST00000384272 103 ntBASIC0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 MIR216A-201ENST00000385063 110 ntBASIC0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 RNA5SP299-201ENST00000391203 116 ntBASIC0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 RNU2-23P-201ENST00000410545 195 ntBASIC0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 RPL22P18-201ENST00000417197 377 ntBASIC0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 BX119904.4-201ENST00000424402 301 ntBASIC0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 RPS26P48-201ENST00000491713 339 ntBASIC0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 AC098799.1-201ENST00000504752 800 ntBASIC0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 AC091435.1-201ENST00000505442 584 ntBASIC0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 AC093809.1-201ENST00000509155 340 ntBASIC0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 AC009646.1-201ENST00000510455 318 ntBASIC0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 RNU6-572P-201ENST00000516724 80 ntBASIC0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 RNA5SP490-201ENST00000517141 136 ntBASIC0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 AC011604.1-201ENST00000545978 196 ntBASIC0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 AC126365.2-201ENST00000580630 379 ntBASIC0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 HMGN1P30-201ENST00000589286 268 ntBASIC0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 VN1R80P-201ENST00000597126 338 ntBASIC0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 AC092354.1-201ENST00000606057 376 ntBASIC0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 MIR3976-201ENST00000606807 139 ntBASIC0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 AC021506.2-201ENST00000612354 169 ntBASIC0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.02□□□□□ -2.41
CHKB-CPT1BH3BT56 snoU2_19.1-201ENST00000362361 80 ntBASIC0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 RNU6-1335P-201ENST00000365426 107 ntBASIC0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 SNORA80D-201ENST00000384488 135 ntBASIC0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 RNU6-1235P-201ENST00000384559 107 ntBASIC0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 RNU6-796P-201ENST00000391086 107 ntBASIC0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 UBE2V1P10-201ENST00000414685 269 ntBASIC0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 AC092473.1-201ENST00000441098 221 ntBASIC0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 RPEP5-201ENST00000441137 268 ntBASIC0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 FTH1P25-201ENST00000447665 469 ntBASIC0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 RNU6-498P-201ENST00000459468 107 ntBASIC0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 RNU6-390P-201ENST00000516259 103 ntBASIC0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 BNIP3P6-201ENST00000549284 499 ntBASIC0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 AL391001.1-201ENST00000602747 715 ntBASIC0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 AC012557.2-201ENST00000605919 418 ntBASIC0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 AL138726.1-201ENST00000614873 333 ntBASIC0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC0□□□□□ -2.41
CHKB-CPT1BH3BT56 MIR373-201ENST00000362273 69 ntBASIC0□□□□□ -2.41
CHKB-CPT1BH3BT56 SNORD115-48-201ENST00000364764 76 ntBASIC0□□□□□ -2.41
CHKB-CPT1BH3BT56 VTRNA1-3-201ENST00000365645 89 ntBASIC0□□□□□ -2.41
CHKB-CPT1BH3BT56 SNORD89-201ENST00000390981 114 ntBASIC0□□□□□ -2.41
CHKB-CPT1BH3BT56 RNA5SP213-201ENST00000391031 106 ntBASIC0□□□□□ -2.41
CHKB-CPT1BH3BT56 RNU6-321P-201ENST00000410912 106 ntBASIC0□□□□□ -2.41
CHKB-CPT1BH3BT56 AC123900.1-201ENST00000420390 96 ntBASIC0□□□□□ -2.41
CHKB-CPT1BH3BT56 AL606662.1-201ENST00000445763 553 ntBASIC0□□□□□ -2.41
CHKB-CPT1BH3BT56 snoU13.15-201ENST00000459407 104 ntBASIC0□□□□□ -2.41
CHKB-CPT1BH3BT56 snoU13.26-201ENST00000459452 105 ntBASIC0□□□□□ -2.41
CHKB-CPT1BH3BT56 MTND1P3-201ENST00000484956 952 ntBASIC0□□□□□ -2.41
CHKB-CPT1BH3BT56 AC105313.1-201ENST00000509121 353 ntBASIC0□□□□□ -2.41
CHKB-CPT1BH3BT56 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC0□□□□□ -2.41
CHKB-CPT1BH3BT56 AC108043.1-201ENST00000512696 574 ntBASIC0□□□□□ -2.41
CHKB-CPT1BH3BT56 SNORA31.3-201ENST00000516029 96 ntBASIC0□□□□□ -2.41
CHKB-CPT1BH3BT56 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC0□□□□□ -2.41
CHKB-CPT1BH3BT56 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0□□□□□ -2.41
CHKB-CPT1BH3BT56 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0□□□□□ -2.41
CHKB-CPT1BH3BT56 MIR4714-201ENST00000580728 77 ntBASIC0□□□□□ -2.41
CHKB-CPT1BH3BT56 AC060771.1-201ENST00000582031 164 ntBASIC0□□□□□ -2.41
CHKB-CPT1BH3BT56 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC0□□□□□ -2.41
CHKB-CPT1BH3BT56 AL358072.1-201ENST00000604156 575 ntBASIC0□□□□□ -2.41
CHKB-CPT1BH3BT56 AC245060.5-201ENST00000610778 3293 ntBASIC-0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 ANKRD36BP1-202ENST00000604892 1417 ntBASIC-0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 RNU6-858P-201ENST00000362436 107 ntBASIC-0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 SNORD3E-201ENST00000362899 217 ntBASIC-0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 RNU6-1066P-201ENST00000363573 105 ntBASIC-0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 RNU6-432P-201ENST00000384196 109 ntBASIC-0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 RNU6-950P-201ENST00000384651 107 ntBASIC-0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 SNORD65C-201ENST00000390962 71 ntBASIC-0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 RNU6-575P-201ENST00000411326 105 ntBASIC-0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 AC011233.1-201ENST00000422812 283 ntBASIC-0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC-0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 FABP5P4-201ENST00000437203 171 ntBASIC-0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC-0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC-0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 AC069257.2-201ENST00000441819 155 ntBASIC-0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC-0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 MTCYBP1-201ENST00000454315 1119 ntBASIC-0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 AC104982.1-201ENST00000478775 574 ntBASIC-0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC-0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC-0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC-0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC-0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 MIR4431-201ENST00000579990 94 ntBASIC-0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 BNIP3P8-201ENST00000597863 560 ntBASIC-0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 RAC1P9-201ENST00000604990 392 ntBASIC-0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC-0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 AC063943.3-201ENST00000615562 356 ntBASIC-0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 SNORD3E-202ENST00000627253 216 ntBASIC-0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 MIR1322-201ENST00000638013 71 ntBASIC-0.01□□□□□ -2.41
CHKB-CPT1BH3BT56 AC107982.1-201ENST00000507171 1300 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms