Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 AL391261.4-201ENST00000616012 481 ntBASIC4.39□□□□□ -1.71
HRH3Q9Y5N1 MIR6853-201ENST00000619642 74 ntBASIC4.39□□□□□ -1.71
HRH3Q9Y5N1 MIR6758-201ENST00000620653 63 ntBASIC4.39□□□□□ -1.71
HRH3Q9Y5N1 MIR3199-2-201ENST00000636243 86 ntBASIC4.39□□□□□ -1.71
HRH3Q9Y5N1 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.39□□□□□ -1.71
HRH3Q9Y5N1 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.39□□□□□ -1.71
HRH3Q9Y5N1 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
HRH3Q9Y5N1 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.39□□□□□ -1.71
HRH3Q9Y5N1 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HRH3Q9Y5N1 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HRH3Q9Y5N1 snoU2_19.4-201ENST00000364329 80 ntBASIC4.38□□□□□ -1.71
HRH3Q9Y5N1 Y_RNA.415-201ENST00000384012 112 ntBASIC4.38□□□□□ -1.71
HRH3Q9Y5N1 MIR616-201ENST00000385293 97 ntBASIC4.38□□□□□ -1.71
HRH3Q9Y5N1 AL031003.1-201ENST00000404229 172 ntBASIC4.38□□□□□ -1.71
HRH3Q9Y5N1 HSPE1P12-201ENST00000412576 301 ntBASIC4.38□□□□□ -1.71
HRH3Q9Y5N1 AC010154.1-201ENST00000425857 269 ntBASIC4.38□□□□□ -1.71
HRH3Q9Y5N1 AC092017.2-201ENST00000427600 362 ntBASIC4.38□□□□□ -1.71
HRH3Q9Y5N1 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.38□□□□□ -1.71
HRH3Q9Y5N1 RN7SL517P-201ENST00000462240 305 ntBASIC4.38□□□□□ -1.71
HRH3Q9Y5N1 RPL31P41-201ENST00000477967 372 ntBASIC4.38□□□□□ -1.71
HRH3Q9Y5N1 ENPP7P9-201ENST00000514456 627 ntBASIC4.38□□□□□ -1.71
HRH3Q9Y5N1 RN7SKP179-201ENST00000516126 217 ntBASIC4.38□□□□□ -1.71
HRH3Q9Y5N1 RNA5SP468-201ENST00000516782 93 ntBASIC4.38□□□□□ -1.71
HRH3Q9Y5N1 RNU6-709P-201ENST00000517257 104 ntBASIC4.38□□□□□ -1.71
HRH3Q9Y5N1 MIR5699-201ENST00000578903 90 ntBASIC4.38□□□□□ -1.71
HRH3Q9Y5N1 MIR4697-201ENST00000582977 78 ntBASIC4.38□□□□□ -1.71
HRH3Q9Y5N1 SNORD11B-201ENST00000607707 90 ntBASIC4.38□□□□□ -1.71
HRH3Q9Y5N1 FAM27B-201ENST00000610601 213 ntBASIC4.38□□□□□ -1.71
HRH3Q9Y5N1 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.38□□□□□ -1.71
HRH3Q9Y5N1 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.38□□□□□ -1.71
HRH3Q9Y5N1 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
HRH3Q9Y5N1 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HRH3Q9Y5N1 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
HRH3Q9Y5N1 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.38□□□□□ -1.71
HRH3Q9Y5N1 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HRH3Q9Y5N1 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HRH3Q9Y5N1 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HRH3Q9Y5N1 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HRH3Q9Y5N1 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.38□□□□□ -1.71
HRH3Q9Y5N1 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HRH3Q9Y5N1 AC004944.1-201ENST00000517807 3059 ntBASIC4.37□□□□□ -1.71
HRH3Q9Y5N1 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.37□□□□□ -1.71
HRH3Q9Y5N1 AF127577.6-201ENST00000623352 2191 ntBASIC4.37□□□□□ -1.71
HRH3Q9Y5N1 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.37□□□□□ -1.71
HRH3Q9Y5N1 AC134026.1-201ENST00000623249 2239 ntBASIC4.37□□□□□ -1.71
HRH3Q9Y5N1 AC139713.2-215ENST00000641428 5037 ntBASIC4.37□□□□□ -1.71
HRH3Q9Y5N1 AL590240.1-201ENST00000334118 313 ntBASIC4.37□□□□□ -1.71
HRH3Q9Y5N1 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HRH3Q9Y5N1 RNU4-10P-201ENST00000364383 140 ntBASIC4.37□□□□□ -1.71
HRH3Q9Y5N1 SNORA1.3-201ENST00000384676 136 ntBASIC4.37□□□□□ -1.71
HRH3Q9Y5N1 MIR607-201ENST00000385241 96 ntBASIC4.37□□□□□ -1.71
HRH3Q9Y5N1 CBX3P9-201ENST00000402326 552 ntBASIC4.37□□□□□ -1.71
HRH3Q9Y5N1 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC4.37□□□□□ -1.71
HRH3Q9Y5N1 AC009237.10-201ENST00000414112 510 ntBASIC4.37□□□□□ -1.71
HRH3Q9Y5N1 VDAC1P3-201ENST00000434069 851 ntBASIC4.37□□□□□ -1.71
HRH3Q9Y5N1 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC4.37□□□□□ -1.71
HRH3Q9Y5N1 snoU13.1-201ENST00000459157 104 ntBASIC4.37□□□□□ -1.71
HRH3Q9Y5N1 MIR5688-201ENST00000580619 83 ntBASIC4.37□□□□□ -1.71
HRH3Q9Y5N1 AL391903.3-201ENST00000612158 163 ntBASIC4.37□□□□□ -1.71
HRH3Q9Y5N1 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HRH3Q9Y5N1 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
HRH3Q9Y5N1 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HRH3Q9Y5N1 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
HRH3Q9Y5N1 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HRH3Q9Y5N1 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.36□□□□□ -1.71
HRH3Q9Y5N1 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HRH3Q9Y5N1 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
HRH3Q9Y5N1 AC015813.6-201ENST00000624409 5808 ntBASIC4.36□□□□□ -1.71
HRH3Q9Y5N1 RNU6-600P-201ENST00000362524 99 ntBASIC4.36□□□□□ -1.71
HRH3Q9Y5N1 RNU6-1205P-201ENST00000363625 106 ntBASIC4.36□□□□□ -1.71
HRH3Q9Y5N1 RNU1-64P-201ENST00000365443 163 ntBASIC4.36□□□□□ -1.71
HRH3Q9Y5N1 SNORA62-201ENST00000365493 153 ntBASIC4.36□□□□□ -1.71
HRH3Q9Y5N1 RNA5SP129-201ENST00000410276 118 ntBASIC4.36□□□□□ -1.71
HRH3Q9Y5N1 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.36□□□□□ -1.71
HRH3Q9Y5N1 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.36□□□□□ -1.71
HRH3Q9Y5N1 AC107626.1-201ENST00000471084 183 ntBASIC4.36□□□□□ -1.71
HRH3Q9Y5N1 AC078918.1-201ENST00000498515 228 ntBASIC4.36□□□□□ -1.71
HRH3Q9Y5N1 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.36□□□□□ -1.71
HRH3Q9Y5N1 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.36□□□□□ -1.71
HRH3Q9Y5N1 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.36□□□□□ -1.71
HRH3Q9Y5N1 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC4.36□□□□□ -1.71
HRH3Q9Y5N1 AC011602.1-201ENST00000546484 331 ntBASIC4.36□□□□□ -1.71
HRH3Q9Y5N1 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.36□□□□□ -1.71
HRH3Q9Y5N1 CYCSP40-201ENST00000575927 294 ntBASIC4.36□□□□□ -1.71
HRH3Q9Y5N1 MIR3646-201ENST00000578301 84 ntBASIC4.36□□□□□ -1.71
HRH3Q9Y5N1 LARP7P3-201ENST00000579888 337 ntBASIC4.36□□□□□ -1.71
HRH3Q9Y5N1 RN7SL690P-201ENST00000582087 240 ntBASIC4.36□□□□□ -1.71
HRH3Q9Y5N1 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.36□□□□□ -1.71
HRH3Q9Y5N1 AL121932.1-201ENST00000605542 214 ntBASIC4.36□□□□□ -1.71
HRH3Q9Y5N1 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.36□□□□□ -1.71
HRH3Q9Y5N1 MIR6844-201ENST00000637122 62 ntBASIC4.36□□□□□ -1.71
HRH3Q9Y5N1 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.36□□□□□ -1.71
HRH3Q9Y5N1 AC092435.4-201ENST00000623012 4159 ntBASIC4.36□□□□□ -1.71
HRH3Q9Y5N1 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
HRH3Q9Y5N1 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HRH3Q9Y5N1 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.36□□□□□ -1.71
HRH3Q9Y5N1 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
HRH3Q9Y5N1 AC068254.2-201ENST00000623938 3577 ntBASIC4.35□□□□□ -1.71
HRH3Q9Y5N1 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HRH3Q9Y5N1 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms