Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC4.19□□□□□ -1.74
DDX41Q9UJV9 AC021146.2-201ENST00000504736 556 ntBASIC4.19□□□□□ -1.74
DDX41Q9UJV9 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.19□□□□□ -1.74
DDX41Q9UJV9 SNORA31.1-201ENST00000515993 133 ntBASIC4.19□□□□□ -1.74
DDX41Q9UJV9 SNORA31.5-201ENST00000516190 133 ntBASIC4.19□□□□□ -1.74
DDX41Q9UJV9 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.19□□□□□ -1.74
DDX41Q9UJV9 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.19□□□□□ -1.74
DDX41Q9UJV9 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.19□□□□□ -1.74
DDX41Q9UJV9 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.19□□□□□ -1.74
DDX41Q9UJV9 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.19□□□□□ -1.74
DDX41Q9UJV9 AL137849.1-201ENST00000604767 169 ntBASIC4.19□□□□□ -1.74
DDX41Q9UJV9 U3.45-201ENST00000607547 219 ntBASIC4.19□□□□□ -1.74
DDX41Q9UJV9 MIR1244-1-201ENST00000612829 85 ntBASIC4.19□□□□□ -1.74
DDX41Q9UJV9 MIR1244-3-201ENST00000635744 85 ntBASIC4.19□□□□□ -1.74
DDX41Q9UJV9 MIR1244-2-201ENST00000636449 85 ntBASIC4.19□□□□□ -1.74
DDX41Q9UJV9 MIR1244-4-202ENST00000636813 85 ntBASIC4.19□□□□□ -1.74
DDX41Q9UJV9 U6.105-201ENST00000637379 88 ntBASIC4.19□□□□□ -1.74
DDX41Q9UJV9 AC233981.2-201ENST00000611524 1614 ntBASIC4.19□□□□□ -1.74
DDX41Q9UJV9 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
DDX41Q9UJV9 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
DDX41Q9UJV9 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
DDX41Q9UJV9 MTND5P27-201ENST00000428871 1720 ntBASIC4.18□□□□□ -1.74
DDX41Q9UJV9 AC233263.6-201ENST00000631132 1963 ntBASIC4.18□□□□□ -1.74
DDX41Q9UJV9 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.18□□□□□ -1.74
DDX41Q9UJV9 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
DDX41Q9UJV9 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.18□□□□□ -1.74
DDX41Q9UJV9 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
DDX41Q9UJV9 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
DDX41Q9UJV9 CEP170P1-201ENST00000502249 4587 ntBASIC4.18□□□□□ -1.74
DDX41Q9UJV9 MFSD8-236ENST00000641509 4050 ntBASIC4.18□□□□□ -1.74
DDX41Q9UJV9 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
DDX41Q9UJV9 Y_RNA.144-201ENST00000363521 113 ntBASIC4.18□□□□□ -1.74
DDX41Q9UJV9 SNORD14.1-201ENST00000365609 90 ntBASIC4.18□□□□□ -1.74
DDX41Q9UJV9 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.18□□□□□ -1.74
DDX41Q9UJV9 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
DDX41Q9UJV9 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
DDX41Q9UJV9 RNU6-843P-201ENST00000384454 104 ntBASIC4.18□□□□□ -1.74
DDX41Q9UJV9 Y_RNA.526-201ENST00000384572 110 ntBASIC4.18□□□□□ -1.74
DDX41Q9UJV9 RNU6-1105P-201ENST00000384774 107 ntBASIC4.18□□□□□ -1.74
DDX41Q9UJV9 RNA5SP424-201ENST00000390988 115 ntBASIC4.18□□□□□ -1.74
DDX41Q9UJV9 RNU6-1077P-201ENST00000410506 102 ntBASIC4.18□□□□□ -1.74
DDX41Q9UJV9 AL358176.2-201ENST00000425769 204 ntBASIC4.18□□□□□ -1.74
DDX41Q9UJV9 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.18□□□□□ -1.74
DDX41Q9UJV9 AC096644.2-201ENST00000429278 159 ntBASIC4.18□□□□□ -1.74
DDX41Q9UJV9 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.18□□□□□ -1.74
DDX41Q9UJV9 RN7SL330P-201ENST00000469709 307 ntBASIC4.18□□□□□ -1.74
DDX41Q9UJV9 AC107626.1-201ENST00000471084 183 ntBASIC4.18□□□□□ -1.74
DDX41Q9UJV9 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.18□□□□□ -1.74
DDX41Q9UJV9 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC4.18□□□□□ -1.74
DDX41Q9UJV9 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.18□□□□□ -1.74
DDX41Q9UJV9 SNORD19.2-201ENST00000516978 73 ntBASIC4.18□□□□□ -1.74
DDX41Q9UJV9 NDUFB9P3-201ENST00000521269 501 ntBASIC4.18□□□□□ -1.74
DDX41Q9UJV9 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.18□□□□□ -1.74
DDX41Q9UJV9 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.18□□□□□ -1.74
DDX41Q9UJV9 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.18□□□□□ -1.74
DDX41Q9UJV9 AC006077.1-201ENST00000604746 343 ntBASIC4.18□□□□□ -1.74
DDX41Q9UJV9 AC007179.3-201ENST00000604976 235 ntBASIC4.18□□□□□ -1.74
DDX41Q9UJV9 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.18□□□□□ -1.74
DDX41Q9UJV9 AC091953.5-201ENST00000622919 233 ntBASIC4.18□□□□□ -1.74
DDX41Q9UJV9 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.18□□□□□ -1.74
DDX41Q9UJV9 AC091812.1-201ENST00000432235 1948 ntBASIC4.18□□□□□ -1.74
DDX41Q9UJV9 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
DDX41Q9UJV9 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
DDX41Q9UJV9 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
DDX41Q9UJV9 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
DDX41Q9UJV9 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
DDX41Q9UJV9 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.17□□□□□ -1.74
DDX41Q9UJV9 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.17□□□□□ -1.74
DDX41Q9UJV9 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
DDX41Q9UJV9 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
DDX41Q9UJV9 RNU6-1309P-201ENST00000363305 108 ntBASIC4.17□□□□□ -1.74
DDX41Q9UJV9 RNU4-42P-201ENST00000364738 142 ntBASIC4.17□□□□□ -1.74
DDX41Q9UJV9 MIR628-201ENST00000385229 95 ntBASIC4.17□□□□□ -1.74
DDX41Q9UJV9 SNORA69.1-201ENST00000390904 137 ntBASIC4.17□□□□□ -1.74
DDX41Q9UJV9 SAR1AP2-201ENST00000392696 594 ntBASIC4.17□□□□□ -1.74
DDX41Q9UJV9 RNA5SP494-201ENST00000410653 129 ntBASIC4.17□□□□□ -1.74
DDX41Q9UJV9 AC112492.4-201ENST00000456549 352 ntBASIC4.17□□□□□ -1.74
DDX41Q9UJV9 SNORA40.14-201ENST00000516543 86 ntBASIC4.17□□□□□ -1.74
DDX41Q9UJV9 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.17□□□□□ -1.74
DDX41Q9UJV9 AC022616.4-201ENST00000522985 181 ntBASIC4.17□□□□□ -1.74
DDX41Q9UJV9 VN1R91P-201ENST00000594377 169 ntBASIC4.17□□□□□ -1.74
DDX41Q9UJV9 AC104695.3-201ENST00000604052 296 ntBASIC4.17□□□□□ -1.74
DDX41Q9UJV9 AC100812.1-201ENST00000607622 580 ntBASIC4.17□□□□□ -1.74
DDX41Q9UJV9 AL132822.1-201ENST00000617063 513 ntBASIC4.17□□□□□ -1.74
DDX41Q9UJV9 MIR4272-201ENST00000635924 64 ntBASIC4.17□□□□□ -1.74
DDX41Q9UJV9 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.17□□□□□ -1.74
DDX41Q9UJV9 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.16□□□□□ -1.74
DDX41Q9UJV9 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
DDX41Q9UJV9 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
DDX41Q9UJV9 Y_RNA.152-201ENST00000363578 100 ntBASIC4.16□□□□□ -1.74
DDX41Q9UJV9 RNU6-283P-201ENST00000364788 107 ntBASIC4.16□□□□□ -1.74
DDX41Q9UJV9 RNU4-9P-201ENST00000364951 139 ntBASIC4.16□□□□□ -1.74
DDX41Q9UJV9 RNU1-140P-201ENST00000365040 165 ntBASIC4.16□□□□□ -1.74
DDX41Q9UJV9 Y_RNA.380-201ENST00000365663 111 ntBASIC4.16□□□□□ -1.74
DDX41Q9UJV9 RNU6-968P-201ENST00000384076 107 ntBASIC4.16□□□□□ -1.74
DDX41Q9UJV9 Y_RNA.485-201ENST00000384395 102 ntBASIC4.16□□□□□ -1.74
DDX41Q9UJV9 RNU6-19P-201ENST00000384718 107 ntBASIC4.16□□□□□ -1.74
DDX41Q9UJV9 MIR218-2-201ENST00000385006 110 ntBASIC4.16□□□□□ -1.74
DDX41Q9UJV9 MIR34B-201ENST00000385076 84 ntBASIC4.16□□□□□ -1.74
DDX41Q9UJV9 RNA5SP390-201ENST00000410191 113 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 174.9 ms