Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 MIR5094-201ENST00000578766 85 ntBASIC0.51□□□□□ -2.33
COMMD3Q9UBI1 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.51□□□□□ -2.33
COMMD3Q9UBI1 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
COMMD3Q9UBI1 7SK.8-201ENST00000612110 250 ntBASIC0.51□□□□□ -2.33
COMMD3Q9UBI1 7SK.11-201ENST00000615477 250 ntBASIC0.51□□□□□ -2.33
COMMD3Q9UBI1 7SK.13-201ENST00000622040 250 ntBASIC0.51□□□□□ -2.33
COMMD3Q9UBI1 AC092656.1-203ENST00000624134 423 ntBASIC0.51□□□□□ -2.33
COMMD3Q9UBI1 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.51□□□□□ -2.33
COMMD3Q9UBI1 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.5□□□□□ -2.33
COMMD3Q9UBI1 RNU6-166P-201ENST00000384371 107 ntBASIC0.5□□□□□ -2.33
COMMD3Q9UBI1 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
COMMD3Q9UBI1 RNU2-23P-201ENST00000410545 195 ntBASIC0.5□□□□□ -2.33
COMMD3Q9UBI1 BX664727.1-201ENST00000416024 466 ntBASIC0.5□□□□□ -2.33
COMMD3Q9UBI1 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.5□□□□□ -2.33
COMMD3Q9UBI1 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.5□□□□□ -2.33
COMMD3Q9UBI1 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
COMMD3Q9UBI1 ZFAND6P1-201ENST00000434138 605 ntBASIC0.5□□□□□ -2.33
COMMD3Q9UBI1 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC0.5□□□□□ -2.33
COMMD3Q9UBI1 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.5□□□□□ -2.33
COMMD3Q9UBI1 AC079776.3-201ENST00000450665 370 ntBASIC0.5□□□□□ -2.33
COMMD3Q9UBI1 AC003071.1-201ENST00000451219 789 ntBASIC0.5□□□□□ -2.33
COMMD3Q9UBI1 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.5□□□□□ -2.33
COMMD3Q9UBI1 AC108078.2-201ENST00000510750 236 ntBASIC0.5□□□□□ -2.33
COMMD3Q9UBI1 RN7SKP265-201ENST00000516448 223 ntBASIC0.5□□□□□ -2.33
COMMD3Q9UBI1 RNU6-197P-201ENST00000516680 100 ntBASIC0.5□□□□□ -2.33
COMMD3Q9UBI1 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.5□□□□□ -2.33
COMMD3Q9UBI1 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
COMMD3Q9UBI1 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.5□□□□□ -2.33
COMMD3Q9UBI1 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC0.5□□□□□ -2.33
COMMD3Q9UBI1 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.5□□□□□ -2.33
COMMD3Q9UBI1 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.5□□□□□ -2.33
COMMD3Q9UBI1 AC137800.2-201ENST00000574375 120 ntBASIC0.5□□□□□ -2.33
COMMD3Q9UBI1 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.5□□□□□ -2.33
COMMD3Q9UBI1 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC0.5□□□□□ -2.33
COMMD3Q9UBI1 AC022022.2-201ENST00000602989 360 ntBASIC0.5□□□□□ -2.33
COMMD3Q9UBI1 LINC02555-201ENST00000563933 1951 ntBASIC0.49□□□□□ -2.33
COMMD3Q9UBI1 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
COMMD3Q9UBI1 RNU6-14P-201ENST00000384630 106 ntBASIC0.49□□□□□ -2.33
COMMD3Q9UBI1 MIR608-201ENST00000384820 100 ntBASIC0.49□□□□□ -2.33
COMMD3Q9UBI1 MIR520A-201ENST00000384862 85 ntBASIC0.49□□□□□ -2.33
COMMD3Q9UBI1 RNU6-817P-201ENST00000391083 104 ntBASIC0.49□□□□□ -2.33
COMMD3Q9UBI1 UBE2V1P10-201ENST00000414685 269 ntBASIC0.49□□□□□ -2.33
COMMD3Q9UBI1 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.49□□□□□ -2.33
COMMD3Q9UBI1 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.49□□□□□ -2.33
COMMD3Q9UBI1 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC0.49□□□□□ -2.33
COMMD3Q9UBI1 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.49□□□□□ -2.33
COMMD3Q9UBI1 AL353752.1-201ENST00000454946 260 ntBASIC0.49□□□□□ -2.33
COMMD3Q9UBI1 RNA5SP269-201ENST00000459032 137 ntBASIC0.49□□□□□ -2.33
COMMD3Q9UBI1 RPL39P36-201ENST00000490784 156 ntBASIC0.49□□□□□ -2.33
COMMD3Q9UBI1 AC005840.1-201ENST00000498412 377 ntBASIC0.49□□□□□ -2.33
COMMD3Q9UBI1 TRBVA-201ENST00000498804 316 ntBASIC0.49□□□□□ -2.33
COMMD3Q9UBI1 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.49□□□□□ -2.33
COMMD3Q9UBI1 AC121161.1-201ENST00000510606 652 ntBASIC0.49□□□□□ -2.33
COMMD3Q9UBI1 AC008837.2-201ENST00000513076 418 ntBASIC0.49□□□□□ -2.33
COMMD3Q9UBI1 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC0.49□□□□□ -2.33
COMMD3Q9UBI1 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.49□□□□□ -2.33
COMMD3Q9UBI1 MIR4498-201ENST00000577599 66 ntBASIC0.49□□□□□ -2.33
COMMD3Q9UBI1 AP001004.1-201ENST00000582468 324 ntBASIC0.49□□□□□ -2.33
COMMD3Q9UBI1 OR4H6P-202ENST00000603819 340 ntBASIC0.49□□□□□ -2.33
COMMD3Q9UBI1 AL365204.3-201ENST00000612448 685 ntBASIC0.49□□□□□ -2.33
COMMD3Q9UBI1 MIR8084-201ENST00000614105 89 ntBASIC0.49□□□□□ -2.33
COMMD3Q9UBI1 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.49□□□□□ -2.33
COMMD3Q9UBI1 AP000676.3-201ENST00000623299 569 ntBASIC0.49□□□□□ -2.33
COMMD3Q9UBI1 AC018630.2-201ENST00000534866 2403 ntBASIC0.49□□□□□ -2.33
COMMD3Q9UBI1 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.49□□□□□ -2.33
COMMD3Q9UBI1 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
COMMD3Q9UBI1 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
COMMD3Q9UBI1 RNU6-1284P-201ENST00000363701 100 ntBASIC0.48□□□□□ -2.33
COMMD3Q9UBI1 RNU6-744P-201ENST00000365557 107 ntBASIC0.48□□□□□ -2.33
COMMD3Q9UBI1 RNU6-1316P-201ENST00000384242 108 ntBASIC0.48□□□□□ -2.33
COMMD3Q9UBI1 MIR194-1-201ENST00000384892 85 ntBASIC0.48□□□□□ -2.33
COMMD3Q9UBI1 MIR548B-201ENST00000385247 97 ntBASIC0.48□□□□□ -2.33
COMMD3Q9UBI1 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC0.48□□□□□ -2.33
COMMD3Q9UBI1 RNU2-42P-201ENST00000410697 113 ntBASIC0.48□□□□□ -2.33
COMMD3Q9UBI1 AP000275.1-201ENST00000411943 390 ntBASIC0.48□□□□□ -2.33
COMMD3Q9UBI1 RAC1P6-201ENST00000423911 575 ntBASIC0.48□□□□□ -2.33
COMMD3Q9UBI1 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.48□□□□□ -2.33
COMMD3Q9UBI1 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.48□□□□□ -2.33
COMMD3Q9UBI1 TIMM9P1-201ENST00000436122 256 ntBASIC0.48□□□□□ -2.33
COMMD3Q9UBI1 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.48□□□□□ -2.33
COMMD3Q9UBI1 AF131216.2-201ENST00000512316 564 ntBASIC0.48□□□□□ -2.33
COMMD3Q9UBI1 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.48□□□□□ -2.33
COMMD3Q9UBI1 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.48□□□□□ -2.33
COMMD3Q9UBI1 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
COMMD3Q9UBI1 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.48□□□□□ -2.33
COMMD3Q9UBI1 MIR3664-201ENST00000579074 99 ntBASIC0.48□□□□□ -2.33
COMMD3Q9UBI1 MIR4293-201ENST00000584305 78 ntBASIC0.48□□□□□ -2.33
COMMD3Q9UBI1 BNIP3P9-201ENST00000603714 553 ntBASIC0.48□□□□□ -2.33
COMMD3Q9UBI1 AL358072.1-201ENST00000604156 575 ntBASIC0.48□□□□□ -2.33
COMMD3Q9UBI1 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC0.48□□□□□ -2.33
COMMD3Q9UBI1 AC120349.3-201ENST00000624377 529 ntBASIC0.48□□□□□ -2.33
COMMD3Q9UBI1 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
COMMD3Q9UBI1 AC009541.1-201ENST00000438279 2662 ntBASIC0.47□□□□□ -2.33
COMMD3Q9UBI1 RNU6-858P-201ENST00000362436 107 ntBASIC0.47□□□□□ -2.33
COMMD3Q9UBI1 Y_RNA.332-201ENST00000365271 113 ntBASIC0.47□□□□□ -2.33
COMMD3Q9UBI1 AC068533.2-201ENST00000411872 306 ntBASIC0.47□□□□□ -2.33
COMMD3Q9UBI1 HMGN1P14-201ENST00000412459 517 ntBASIC0.47□□□□□ -2.33
COMMD3Q9UBI1 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.47□□□□□ -2.33
COMMD3Q9UBI1 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.47□□□□□ -2.33
COMMD3Q9UBI1 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms