Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC005668.1-201ENST00000571142 476 ntBASIC3.02□□□□□ -1.93
LRFN1Q9P244 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.02□□□□□ -1.93
LRFN1Q9P244 MIR3616-201ENST00000584070 92 ntBASIC3.02□□□□□ -1.93
LRFN1Q9P244 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.02□□□□□ -1.93
LRFN1Q9P244 AL157817.1-201ENST00000614264 790 ntBASIC3.02□□□□□ -1.93
LRFN1Q9P244 AL162274.2-201ENST00000614406 332 ntBASIC3.02□□□□□ -1.93
LRFN1Q9P244 AC097372.5-201ENST00000623665 376 ntBASIC3.02□□□□□ -1.93
LRFN1Q9P244 AC006386.2-201ENST00000624491 75 ntBASIC3.02□□□□□ -1.93
LRFN1Q9P244 AC012005.1-201ENST00000624575 75 ntBASIC3.02□□□□□ -1.93
LRFN1Q9P244 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
LRFN1Q9P244 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
LRFN1Q9P244 AC080128.1-201ENST00000474389 1917 ntBASIC3.01□□□□□ -1.93
LRFN1Q9P244 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
LRFN1Q9P244 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
LRFN1Q9P244 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.01□□□□□ -1.93
LRFN1Q9P244 Y_RNA.166-201ENST00000363730 102 ntBASIC3.01□□□□□ -1.93
LRFN1Q9P244 Y_RNA.301-201ENST00000364990 103 ntBASIC3.01□□□□□ -1.93
LRFN1Q9P244 SNORD116-11-201ENST00000383882 92 ntBASIC3.01□□□□□ -1.93
LRFN1Q9P244 RNU2-23P-201ENST00000410545 195 ntBASIC3.01□□□□□ -1.93
LRFN1Q9P244 RNU6-293P-201ENST00000411259 106 ntBASIC3.01□□□□□ -1.93
LRFN1Q9P244 NDUFB4P5-201ENST00000415445 361 ntBASIC3.01□□□□□ -1.93
LRFN1Q9P244 AL356968.1-201ENST00000416622 474 ntBASIC3.01□□□□□ -1.93
LRFN1Q9P244 SNAP23P1-201ENST00000433229 246 ntBASIC3.01□□□□□ -1.93
LRFN1Q9P244 AL645568.3-201ENST00000433683 316 ntBASIC3.01□□□□□ -1.93
LRFN1Q9P244 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.01□□□□□ -1.93
LRFN1Q9P244 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.01□□□□□ -1.93
LRFN1Q9P244 PPP1R2P5-201ENST00000457256 603 ntBASIC3.01□□□□□ -1.93
LRFN1Q9P244 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.01□□□□□ -1.93
LRFN1Q9P244 AC109925.1-201ENST00000478069 331 ntBASIC3.01□□□□□ -1.93
LRFN1Q9P244 AC096745.1-201ENST00000509945 370 ntBASIC3.01□□□□□ -1.93
LRFN1Q9P244 RNU7-30P-201ENST00000516835 62 ntBASIC3.01□□□□□ -1.93
LRFN1Q9P244 RNU6-56P-201ENST00000516986 93 ntBASIC3.01□□□□□ -1.93
LRFN1Q9P244 SNORA31.18-201ENST00000517043 134 ntBASIC3.01□□□□□ -1.93
LRFN1Q9P244 SCARNA3-201ENST00000517097 143 ntBASIC3.01□□□□□ -1.93
LRFN1Q9P244 AC009812.2-201ENST00000517657 457 ntBASIC3.01□□□□□ -1.93
LRFN1Q9P244 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.01□□□□□ -1.93
LRFN1Q9P244 NDUFB9P3-201ENST00000521269 501 ntBASIC3.01□□□□□ -1.93
LRFN1Q9P244 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.01□□□□□ -1.93
LRFN1Q9P244 TRAV32-201ENST00000553993 340 ntBASIC3.01□□□□□ -1.93
LRFN1Q9P244 TGIF1P1-201ENST00000558095 802 ntBASIC3.01□□□□□ -1.93
LRFN1Q9P244 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.01□□□□□ -1.93
LRFN1Q9P244 MIR5004-201ENST00000579078 107 ntBASIC3.01□□□□□ -1.93
LRFN1Q9P244 AC103810.1-201ENST00000579873 453 ntBASIC3.01□□□□□ -1.93
LRFN1Q9P244 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.01□□□□□ -1.93
LRFN1Q9P244 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.01□□□□□ -1.93
LRFN1Q9P244 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.01□□□□□ -1.93
LRFN1Q9P244 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
LRFN1Q9P244 Z75746.1-201ENST00000440243 2080 ntBASIC3□□□□□ -1.93
LRFN1Q9P244 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3□□□□□ -1.93
LRFN1Q9P244 AC073544.1-201ENST00000600110 1595 ntBASIC3□□□□□ -1.93
LRFN1Q9P244 AC002543.1-201ENST00000299783 1954 ntBASIC3□□□□□ -1.93
LRFN1Q9P244 RNU6-562P-201ENST00000362731 107 ntBASIC3□□□□□ -1.93
LRFN1Q9P244 Y_RNA.61-201ENST00000362835 102 ntBASIC3□□□□□ -1.93
LRFN1Q9P244 AL356432.1-201ENST00000405809 419 ntBASIC3□□□□□ -1.93
LRFN1Q9P244 U6atac.2-201ENST00000408644 118 ntBASIC3□□□□□ -1.93
LRFN1Q9P244 RNU6-1140P-201ENST00000410517 106 ntBASIC3□□□□□ -1.93
LRFN1Q9P244 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3□□□□□ -1.93
LRFN1Q9P244 AC112771.1-201ENST00000463581 102 ntBASIC3□□□□□ -1.93
LRFN1Q9P244 CENPBD1P1-201ENST00000464061 469 ntBASIC3□□□□□ -1.93
LRFN1Q9P244 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3□□□□□ -1.93
LRFN1Q9P244 RNU6-273P-201ENST00000516937 96 ntBASIC3□□□□□ -1.93
LRFN1Q9P244 EIF4BP1-201ENST00000554881 351 ntBASIC3□□□□□ -1.93
LRFN1Q9P244 AC026464.5-201ENST00000562497 722 ntBASIC3□□□□□ -1.93
LRFN1Q9P244 AC105137.2-201ENST00000569073 466 ntBASIC3□□□□□ -1.93
LRFN1Q9P244 RPS3AP23-202ENST00000574601 686 ntBASIC3□□□□□ -1.93
LRFN1Q9P244 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3□□□□□ -1.93
LRFN1Q9P244 uc_338.1-201ENST00000612113 180 ntBASIC3□□□□□ -1.93
LRFN1Q9P244 AC104237.2-201ENST00000612456 443 ntBASIC3□□□□□ -1.93
LRFN1Q9P244 AC241585.2-209ENST00000638217 143 ntBASIC3□□□□□ -1.93
LRFN1Q9P244 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3□□□□□ -1.93
LRFN1Q9P244 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3□□□□□ -1.93
LRFN1Q9P244 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
LRFN1Q9P244 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
LRFN1Q9P244 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3□□□□□ -1.93
LRFN1Q9P244 MTND4P23-201ENST00000447723 1363 ntBASIC3□□□□□ -1.93
LRFN1Q9P244 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LRFN1Q9P244 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
LRFN1Q9P244 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
LRFN1Q9P244 Y_RNA.356-201ENST00000365475 113 ntBASIC2.99□□□□□ -1.93
LRFN1Q9P244 Y_RNA.529-201ENST00000384586 119 ntBASIC2.99□□□□□ -1.93
LRFN1Q9P244 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
LRFN1Q9P244 AL360182.1-201ENST00000397433 468 ntBASIC2.99□□□□□ -1.93
LRFN1Q9P244 AL030996.1-201ENST00000411430 235 ntBASIC2.99□□□□□ -1.93
LRFN1Q9P244 CYCSP48-201ENST00000417124 323 ntBASIC2.99□□□□□ -1.93
LRFN1Q9P244 AC138623.1-201ENST00000418060 216 ntBASIC2.99□□□□□ -1.93
LRFN1Q9P244 COTL1P1-201ENST00000422309 375 ntBASIC2.99□□□□□ -1.93
LRFN1Q9P244 BX276092.3-201ENST00000424182 230 ntBASIC2.99□□□□□ -1.93
LRFN1Q9P244 RPL30P4-201ENST00000429309 333 ntBASIC2.99□□□□□ -1.93
LRFN1Q9P244 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.99□□□□□ -1.93
LRFN1Q9P244 snoU13.14-201ENST00000459372 104 ntBASIC2.99□□□□□ -1.93
LRFN1Q9P244 RPL23AP70-201ENST00000483361 460 ntBASIC2.99□□□□□ -1.93
LRFN1Q9P244 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.99□□□□□ -1.93
LRFN1Q9P244 MTND3P22-201ENST00000510932 243 ntBASIC2.99□□□□□ -1.93
LRFN1Q9P244 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.99□□□□□ -1.93
LRFN1Q9P244 RNU6-1088P-201ENST00000516850 104 ntBASIC2.99□□□□□ -1.93
LRFN1Q9P244 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.99□□□□□ -1.93
LRFN1Q9P244 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.99□□□□□ -1.93
LRFN1Q9P244 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.99□□□□□ -1.93
LRFN1Q9P244 LARP7P3-201ENST00000579888 337 ntBASIC2.99□□□□□ -1.93
LRFN1Q9P244 AL356157.2-201ENST00000605122 111 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms