Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.41□□□□□ -1.86
MKS1Q9NXB0 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
MKS1Q9NXB0 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
MKS1Q9NXB0 AC009541.1-201ENST00000438279 2662 ntBASIC3.41□□□□□ -1.86
MKS1Q9NXB0 AP003122.5-201ENST00000527668 3766 ntBASIC3.41□□□□□ -1.86
MKS1Q9NXB0 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
MKS1Q9NXB0 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
MKS1Q9NXB0 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
MKS1Q9NXB0 Y_RNA.533-201ENST00000384596 114 ntBASIC3.4□□□□□ -1.87
MKS1Q9NXB0 RNU6-1222P-201ENST00000384615 107 ntBASIC3.4□□□□□ -1.87
MKS1Q9NXB0 AL031121.1-201ENST00000406553 254 ntBASIC3.4□□□□□ -1.87
MKS1Q9NXB0 RN7SKP156-201ENST00000410308 342 ntBASIC3.4□□□□□ -1.87
MKS1Q9NXB0 RNU6-628P-201ENST00000410675 107 ntBASIC3.4□□□□□ -1.87
MKS1Q9NXB0 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.4□□□□□ -1.87
MKS1Q9NXB0 DBIP2-201ENST00000419076 262 ntBASIC3.4□□□□□ -1.87
MKS1Q9NXB0 AC243428.1-201ENST00000421099 264 ntBASIC3.4□□□□□ -1.87
MKS1Q9NXB0 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.4□□□□□ -1.87
MKS1Q9NXB0 AL358075.3-201ENST00000426289 226 ntBASIC3.4□□□□□ -1.87
MKS1Q9NXB0 AC009969.1-201ENST00000438726 172 ntBASIC3.4□□□□□ -1.87
MKS1Q9NXB0 RPL39P29-201ENST00000447779 157 ntBASIC3.4□□□□□ -1.87
MKS1Q9NXB0 AC079354.2-201ENST00000453523 154 ntBASIC3.4□□□□□ -1.87
MKS1Q9NXB0 AP001324.2-201ENST00000461163 319 ntBASIC3.4□□□□□ -1.87
MKS1Q9NXB0 AC022447.4-201ENST00000504053 364 ntBASIC3.4□□□□□ -1.87
MKS1Q9NXB0 RNA5SP385-201ENST00000515947 110 ntBASIC3.4□□□□□ -1.87
MKS1Q9NXB0 RNA5SP380-201ENST00000517190 98 ntBASIC3.4□□□□□ -1.87
MKS1Q9NXB0 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.4□□□□□ -1.87
MKS1Q9NXB0 RPS15AP11-201ENST00000594193 385 ntBASIC3.4□□□□□ -1.87
MKS1Q9NXB0 AL158827.2-201ENST00000602494 330 ntBASIC3.4□□□□□ -1.87
MKS1Q9NXB0 HMGB1P24-202ENST00000615653 685 ntBASIC3.4□□□□□ -1.87
MKS1Q9NXB0 AL691447.3-201ENST00000635020 330 ntBASIC3.4□□□□□ -1.87
MKS1Q9NXB0 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
MKS1Q9NXB0 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
MKS1Q9NXB0 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
MKS1Q9NXB0 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.39□□□□□ -1.87
MKS1Q9NXB0 Y_RNA.128-201ENST00000363391 112 ntBASIC3.39□□□□□ -1.87
MKS1Q9NXB0 RNA5SP283-201ENST00000365604 119 ntBASIC3.39□□□□□ -1.87
MKS1Q9NXB0 RNU6-474P-201ENST00000384243 107 ntBASIC3.39□□□□□ -1.87
MKS1Q9NXB0 RNU6-1140P-201ENST00000410517 106 ntBASIC3.39□□□□□ -1.87
MKS1Q9NXB0 AC096664.2-201ENST00000411843 406 ntBASIC3.39□□□□□ -1.87
MKS1Q9NXB0 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.39□□□□□ -1.87
MKS1Q9NXB0 RPL30P12-201ENST00000474666 353 ntBASIC3.39□□□□□ -1.87
MKS1Q9NXB0 AC022493.2-201ENST00000506122 481 ntBASIC3.39□□□□□ -1.87
MKS1Q9NXB0 RNU1-143P-201ENST00000516296 146 ntBASIC3.39□□□□□ -1.87
MKS1Q9NXB0 SNORA70.18-201ENST00000516696 98 ntBASIC3.39□□□□□ -1.87
MKS1Q9NXB0 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.39□□□□□ -1.87
MKS1Q9NXB0 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.39□□□□□ -1.87
MKS1Q9NXB0 AC096772.1-201ENST00000609146 564 ntBASIC3.39□□□□□ -1.87
MKS1Q9NXB0 U1.23-201ENST00000610293 146 ntBASIC3.39□□□□□ -1.87
MKS1Q9NXB0 RNU1-68P-201ENST00000615382 146 ntBASIC3.39□□□□□ -1.87
MKS1Q9NXB0 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
MKS1Q9NXB0 U1.39-201ENST00000621562 146 ntBASIC3.39□□□□□ -1.87
MKS1Q9NXB0 AC068724.3-201ENST00000625906 87 ntBASIC3.39□□□□□ -1.87
MKS1Q9NXB0 RNA5SP196-201ENST00000625967 102 ntBASIC3.39□□□□□ -1.87
MKS1Q9NXB0 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
MKS1Q9NXB0 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.39□□□□□ -1.87
MKS1Q9NXB0 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.39□□□□□ -1.87
MKS1Q9NXB0 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
MKS1Q9NXB0 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.38□□□□□ -1.87
MKS1Q9NXB0 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
MKS1Q9NXB0 RNU6-1115P-201ENST00000362490 106 ntBASIC3.38□□□□□ -1.87
MKS1Q9NXB0 RNU6-1141P-201ENST00000364520 107 ntBASIC3.38□□□□□ -1.87
MKS1Q9NXB0 RNA5SP51-201ENST00000364750 119 ntBASIC3.38□□□□□ -1.87
MKS1Q9NXB0 MIR559-201ENST00000385188 96 ntBASIC3.38□□□□□ -1.87
MKS1Q9NXB0 RN7SKP263-201ENST00000411194 309 ntBASIC3.38□□□□□ -1.87
MKS1Q9NXB0 AC068781.1-201ENST00000488231 618 ntBASIC3.38□□□□□ -1.87
MKS1Q9NXB0 AC091874.1-201ENST00000511402 339 ntBASIC3.38□□□□□ -1.87
MKS1Q9NXB0 MRPS36P2-201ENST00000512569 299 ntBASIC3.38□□□□□ -1.87
MKS1Q9NXB0 RNU6-120P-201ENST00000516077 103 ntBASIC3.38□□□□□ -1.87
MKS1Q9NXB0 RNU6-264P-201ENST00000517134 104 ntBASIC3.38□□□□□ -1.87
MKS1Q9NXB0 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.38□□□□□ -1.87
MKS1Q9NXB0 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.38□□□□□ -1.87
MKS1Q9NXB0 MIR3160-1-201ENST00000577972 85 ntBASIC3.38□□□□□ -1.87
MKS1Q9NXB0 AC011471.1-201ENST00000585766 187 ntBASIC3.38□□□□□ -1.87
MKS1Q9NXB0 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
MKS1Q9NXB0 AC012493.2-201ENST00000595083 291 ntBASIC3.38□□□□□ -1.87
MKS1Q9NXB0 AL137843.1-201ENST00000605078 385 ntBASIC3.38□□□□□ -1.87
MKS1Q9NXB0 AC005014.2-201ENST00000607795 599 ntBASIC3.38□□□□□ -1.87
MKS1Q9NXB0 AC107294.3-201ENST00000609211 526 ntBASIC3.38□□□□□ -1.87
MKS1Q9NXB0 MIR6875-201ENST00000617506 72 ntBASIC3.38□□□□□ -1.87
MKS1Q9NXB0 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.38□□□□□ -1.87
MKS1Q9NXB0 uc_338.22-201ENST00000622722 187 ntBASIC3.38□□□□□ -1.87
MKS1Q9NXB0 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.38□□□□□ -1.87
MKS1Q9NXB0 AC119674.1-207ENST00000641355 633 ntBASIC3.38□□□□□ -1.87
MKS1Q9NXB0 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
MKS1Q9NXB0 MTND5P30-201ENST00000452896 1731 ntBASIC3.38□□□□□ -1.87
MKS1Q9NXB0 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
MKS1Q9NXB0 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.38□□□□□ -1.87
MKS1Q9NXB0 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.38□□□□□ -1.87
MKS1Q9NXB0 AC002543.1-201ENST00000299783 1954 ntBASIC3.38□□□□□ -1.87
MKS1Q9NXB0 ZNF299P-201ENST00000406845 1804 ntBASIC3.37□□□□□ -1.87
MKS1Q9NXB0 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
MKS1Q9NXB0 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.37□□□□□ -1.87
MKS1Q9NXB0 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
MKS1Q9NXB0 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
MKS1Q9NXB0 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
MKS1Q9NXB0 RNU6-490P-201ENST00000362985 107 ntBASIC3.37□□□□□ -1.87
MKS1Q9NXB0 Y_RNA.445-201ENST00000384168 102 ntBASIC3.37□□□□□ -1.87
MKS1Q9NXB0 Y_RNA.463-201ENST00000384271 102 ntBASIC3.37□□□□□ -1.87
MKS1Q9NXB0 U8.11-201ENST00000384699 133 ntBASIC3.37□□□□□ -1.87
MKS1Q9NXB0 U8.12-201ENST00000384701 133 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms