Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC115990.1-201ENST00000526957 301 ntBASIC2.72□□□□□ -1.97
BLOC1S4Q9NUP1 CYCSP27-201ENST00000527643 293 ntBASIC2.72□□□□□ -1.97
BLOC1S4Q9NUP1 AC004486.1-201ENST00000546846 233 ntBASIC2.72□□□□□ -1.97
BLOC1S4Q9NUP1 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.72□□□□□ -1.97
BLOC1S4Q9NUP1 AL138976.2-201ENST00000563989 694 ntBASIC2.72□□□□□ -1.97
BLOC1S4Q9NUP1 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.72□□□□□ -1.97
BLOC1S4Q9NUP1 MIR3670-2-201ENST00000582974 65 ntBASIC2.72□□□□□ -1.97
BLOC1S4Q9NUP1 MIR3670-1-201ENST00000584160 65 ntBASIC2.72□□□□□ -1.97
BLOC1S4Q9NUP1 MIR3670-3-201ENST00000584855 65 ntBASIC2.72□□□□□ -1.97
BLOC1S4Q9NUP1 VN1R107P-201ENST00000601784 209 ntBASIC2.72□□□□□ -1.97
BLOC1S4Q9NUP1 MIR3670-4-201ENST00000612260 65 ntBASIC2.72□□□□□ -1.97
BLOC1S4Q9NUP1 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
BLOC1S4Q9NUP1 AC243829.7-201ENST00000633081 225 ntBASIC2.72□□□□□ -1.97
BLOC1S4Q9NUP1 MIR6863-201ENST00000636112 90 ntBASIC2.72□□□□□ -1.97
BLOC1S4Q9NUP1 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.72□□□□□ -1.97
BLOC1S4Q9NUP1 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
BLOC1S4Q9NUP1 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.97
BLOC1S4Q9NUP1 AP006437.1-201ENST00000641440 3685 ntBASIC2.71□□□□□ -1.98
BLOC1S4Q9NUP1 AL354685.2-201ENST00000448218 1447 ntBASIC2.71□□□□□ -1.98
BLOC1S4Q9NUP1 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
BLOC1S4Q9NUP1 MIR21-201ENST00000362134 72 ntBASIC2.71□□□□□ -1.98
BLOC1S4Q9NUP1 RNU6-1085P-201ENST00000363576 107 ntBASIC2.71□□□□□ -1.98
BLOC1S4Q9NUP1 RNU6-105P-201ENST00000363909 104 ntBASIC2.71□□□□□ -1.98
BLOC1S4Q9NUP1 U8.8-201ENST00000365399 135 ntBASIC2.71□□□□□ -1.98
BLOC1S4Q9NUP1 DEFA7P-201ENST00000382676 285 ntBASIC2.71□□□□□ -1.98
BLOC1S4Q9NUP1 RNU6-1222P-201ENST00000384615 107 ntBASIC2.71□□□□□ -1.98
BLOC1S4Q9NUP1 SNORD37.1-201ENST00000390968 65 ntBASIC2.71□□□□□ -1.98
BLOC1S4Q9NUP1 CBX3P9-201ENST00000402326 552 ntBASIC2.71□□□□□ -1.98
BLOC1S4Q9NUP1 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.71□□□□□ -1.98
BLOC1S4Q9NUP1 RNU6-1140P-201ENST00000410517 106 ntBASIC2.71□□□□□ -1.98
BLOC1S4Q9NUP1 SNORD56-201ENST00000413522 71 ntBASIC2.71□□□□□ -1.98
BLOC1S4Q9NUP1 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.71□□□□□ -1.98
BLOC1S4Q9NUP1 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.71□□□□□ -1.98
BLOC1S4Q9NUP1 VN1R108P-201ENST00000431580 830 ntBASIC2.71□□□□□ -1.98
BLOC1S4Q9NUP1 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.71□□□□□ -1.98
BLOC1S4Q9NUP1 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.71□□□□□ -1.98
BLOC1S4Q9NUP1 AL121594.1-201ENST00000475906 575 ntBASIC2.71□□□□□ -1.98
BLOC1S4Q9NUP1 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.71□□□□□ -1.98
BLOC1S4Q9NUP1 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.71□□□□□ -1.98
BLOC1S4Q9NUP1 AC104383.1-201ENST00000530297 370 ntBASIC2.71□□□□□ -1.98
BLOC1S4Q9NUP1 CBX3P7-201ENST00000532876 502 ntBASIC2.71□□□□□ -1.98
BLOC1S4Q9NUP1 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.71□□□□□ -1.98
BLOC1S4Q9NUP1 IMMP1LP2-201ENST00000552954 492 ntBASIC2.71□□□□□ -1.98
BLOC1S4Q9NUP1 MIR4672-201ENST00000583126 81 ntBASIC2.71□□□□□ -1.98
BLOC1S4Q9NUP1 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
BLOC1S4Q9NUP1 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
BLOC1S4Q9NUP1 AC131280.1-202ENST00000624067 4211 ntBASIC2.7□□□□□ -1.98
BLOC1S4Q9NUP1 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
BLOC1S4Q9NUP1 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
BLOC1S4Q9NUP1 MIR6073-201ENST00000352083 89 ntBASIC2.7□□□□□ -1.98
BLOC1S4Q9NUP1 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.7□□□□□ -1.98
BLOC1S4Q9NUP1 USP9YP14-201ENST00000430663 563 ntBASIC2.7□□□□□ -1.98
BLOC1S4Q9NUP1 AC007969.2-201ENST00000441891 191 ntBASIC2.7□□□□□ -1.98
BLOC1S4Q9NUP1 PSPHP1-201ENST00000450062 261 ntBASIC2.7□□□□□ -1.98
BLOC1S4Q9NUP1 MTND2P33-201ENST00000506452 1031 ntBASIC2.7□□□□□ -1.98
BLOC1S4Q9NUP1 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.7□□□□□ -1.98
BLOC1S4Q9NUP1 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.7□□□□□ -1.98
BLOC1S4Q9NUP1 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.7□□□□□ -1.98
BLOC1S4Q9NUP1 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.7□□□□□ -1.98
BLOC1S4Q9NUP1 AC022880.1-201ENST00000534017 973 ntBASIC2.7□□□□□ -1.98
BLOC1S4Q9NUP1 AL512310.1-201ENST00000548639 172 ntBASIC2.7□□□□□ -1.98
BLOC1S4Q9NUP1 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
BLOC1S4Q9NUP1 AC091135.1-201ENST00000585943 307 ntBASIC2.7□□□□□ -1.98
BLOC1S4Q9NUP1 BNIP3P16-201ENST00000589779 534 ntBASIC2.7□□□□□ -1.98
BLOC1S4Q9NUP1 AC060766.3-201ENST00000591442 263 ntBASIC2.7□□□□□ -1.98
BLOC1S4Q9NUP1 AC006023.1-201ENST00000603944 259 ntBASIC2.7□□□□□ -1.98
BLOC1S4Q9NUP1 AC007621.1-201ENST00000604544 437 ntBASIC2.7□□□□□ -1.98
BLOC1S4Q9NUP1 AC002044.1-201ENST00000606707 158 ntBASIC2.7□□□□□ -1.98
BLOC1S4Q9NUP1 AC067747.1-201ENST00000608026 250 ntBASIC2.7□□□□□ -1.98
BLOC1S4Q9NUP1 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
BLOC1S4Q9NUP1 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
BLOC1S4Q9NUP1 AC124864.2-201ENST00000624736 186 ntBASIC2.7□□□□□ -1.98
BLOC1S4Q9NUP1 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.7□□□□□ -1.98
BLOC1S4Q9NUP1 MIR203B-201ENST00000636080 86 ntBASIC2.7□□□□□ -1.98
BLOC1S4Q9NUP1 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
BLOC1S4Q9NUP1 RNU6-82P-201ENST00000363970 107 ntBASIC2.69□□□□□ -1.98
BLOC1S4Q9NUP1 SNORA41-201ENST00000384675 132 ntBASIC2.69□□□□□ -1.98
BLOC1S4Q9NUP1 SNORA67.4-201ENST00000384688 142 ntBASIC2.69□□□□□ -1.98
BLOC1S4Q9NUP1 MIR29B2-201ENST00000385055 81 ntBASIC2.69□□□□□ -1.98
BLOC1S4Q9NUP1 RNU6-1106P-201ENST00000390845 107 ntBASIC2.69□□□□□ -1.98
BLOC1S4Q9NUP1 MTCO3P40-201ENST00000392516 676 ntBASIC2.69□□□□□ -1.98
BLOC1S4Q9NUP1 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
BLOC1S4Q9NUP1 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.69□□□□□ -1.98
BLOC1S4Q9NUP1 DNAJC19P4-201ENST00000440115 345 ntBASIC2.69□□□□□ -1.98
BLOC1S4Q9NUP1 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.69□□□□□ -1.98
BLOC1S4Q9NUP1 MTND1P1-201ENST00000445453 368 ntBASIC2.69□□□□□ -1.98
BLOC1S4Q9NUP1 RPL39P29-201ENST00000447779 157 ntBASIC2.69□□□□□ -1.98
BLOC1S4Q9NUP1 AP000852.1-201ENST00000472460 573 ntBASIC2.69□□□□□ -1.98
BLOC1S4Q9NUP1 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.69□□□□□ -1.98
BLOC1S4Q9NUP1 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.69□□□□□ -1.98
BLOC1S4Q9NUP1 RNU6-826P-201ENST00000516827 104 ntBASIC2.69□□□□□ -1.98
BLOC1S4Q9NUP1 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.69□□□□□ -1.98
BLOC1S4Q9NUP1 AC118273.2-201ENST00000532092 465 ntBASIC2.69□□□□□ -1.98
BLOC1S4Q9NUP1 AC093249.1-201ENST00000567049 203 ntBASIC2.69□□□□□ -1.98
BLOC1S4Q9NUP1 AC025165.5-201ENST00000602802 578 ntBASIC2.69□□□□□ -1.98
BLOC1S4Q9NUP1 AC103810.6-201ENST00000606708 136 ntBASIC2.69□□□□□ -1.98
BLOC1S4Q9NUP1 AC245884.12-201ENST00000615364 59 ntBASIC2.69□□□□□ -1.98
BLOC1S4Q9NUP1 AC010297.1-201ENST00000623948 149 ntBASIC2.69□□□□□ -1.98
BLOC1S4Q9NUP1 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.69□□□□□ -1.98
BLOC1S4Q9NUP1 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms