Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 RN7SL20P-201ENST00000488827 297 ntBASIC3.18□□□□□ -1.9
USP29Q9HBJ7 AC113155.1-201ENST00000511141 769 ntBASIC3.18□□□□□ -1.9
USP29Q9HBJ7 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
USP29Q9HBJ7 CBX3P7-201ENST00000532876 502 ntBASIC3.18□□□□□ -1.9
USP29Q9HBJ7 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.18□□□□□ -1.9
USP29Q9HBJ7 EIF4BP1-201ENST00000554881 351 ntBASIC3.18□□□□□ -1.9
USP29Q9HBJ7 MIR5690-201ENST00000583739 73 ntBASIC3.18□□□□□ -1.9
USP29Q9HBJ7 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.18□□□□□ -1.9
USP29Q9HBJ7 AL451007.1-201ENST00000595491 289 ntBASIC3.18□□□□□ -1.9
USP29Q9HBJ7 AL355598.1-201ENST00000604169 202 ntBASIC3.18□□□□□ -1.9
USP29Q9HBJ7 AP000787.2-201ENST00000604432 568 ntBASIC3.18□□□□□ -1.9
USP29Q9HBJ7 AL080274.1-201ENST00000605565 220 ntBASIC3.18□□□□□ -1.9
USP29Q9HBJ7 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.18□□□□□ -1.9
USP29Q9HBJ7 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.18□□□□□ -1.9
USP29Q9HBJ7 AC018692.3-201ENST00000623929 123 ntBASIC3.18□□□□□ -1.9
USP29Q9HBJ7 AL669831.3-213ENST00000636676 183 ntBASIC3.18□□□□□ -1.9
USP29Q9HBJ7 U6.99-201ENST00000637524 83 ntBASIC3.18□□□□□ -1.9
USP29Q9HBJ7 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
USP29Q9HBJ7 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
USP29Q9HBJ7 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.18□□□□□ -1.9
USP29Q9HBJ7 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
USP29Q9HBJ7 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.17□□□□□ -1.9
USP29Q9HBJ7 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
USP29Q9HBJ7 AC010680.1-201ENST00000590024 3590 ntBASIC3.17□□□□□ -1.9
USP29Q9HBJ7 Y_RNA.132-201ENST00000363421 102 ntBASIC3.17□□□□□ -1.9
USP29Q9HBJ7 SNORA14A-201ENST00000364773 135 ntBASIC3.17□□□□□ -1.9
USP29Q9HBJ7 Y_RNA.326-201ENST00000365176 113 ntBASIC3.17□□□□□ -1.9
USP29Q9HBJ7 Y_RNA.395-201ENST00000383945 109 ntBASIC3.17□□□□□ -1.9
USP29Q9HBJ7 Y_RNA.404-201ENST00000383978 102 ntBASIC3.17□□□□□ -1.9
USP29Q9HBJ7 RNU6-72P-201ENST00000384285 79 ntBASIC3.17□□□□□ -1.9
USP29Q9HBJ7 Y_RNA.473-201ENST00000384333 102 ntBASIC3.17□□□□□ -1.9
USP29Q9HBJ7 Y_RNA.500-201ENST00000384466 111 ntBASIC3.17□□□□□ -1.9
USP29Q9HBJ7 RNU6-306P-201ENST00000384617 107 ntBASIC3.17□□□□□ -1.9
USP29Q9HBJ7 SNORA75.4-201ENST00000391278 119 ntBASIC3.17□□□□□ -1.9
USP29Q9HBJ7 Y_RNA.594-201ENST00000410373 140 ntBASIC3.17□□□□□ -1.9
USP29Q9HBJ7 RNU6-1050P-201ENST00000410388 107 ntBASIC3.17□□□□□ -1.9
USP29Q9HBJ7 Y_RNA.646-201ENST00000410980 101 ntBASIC3.17□□□□□ -1.9
USP29Q9HBJ7 AL030996.1-201ENST00000411430 235 ntBASIC3.17□□□□□ -1.9
USP29Q9HBJ7 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.17□□□□□ -1.9
USP29Q9HBJ7 AL117339.3-201ENST00000418733 162 ntBASIC3.17□□□□□ -1.9
USP29Q9HBJ7 AL353729.1-201ENST00000425044 720 ntBASIC3.17□□□□□ -1.9
USP29Q9HBJ7 USP9YP30-201ENST00000430729 455 ntBASIC3.17□□□□□ -1.9
USP29Q9HBJ7 AC236972.1-201ENST00000433225 199 ntBASIC3.17□□□□□ -1.9
USP29Q9HBJ7 UQCRHP3-201ENST00000451503 251 ntBASIC3.17□□□□□ -1.9
USP29Q9HBJ7 AC091179.1-201ENST00000461606 579 ntBASIC3.17□□□□□ -1.9
USP29Q9HBJ7 MTCYBP40-201ENST00000509390 1135 ntBASIC3.17□□□□□ -1.9
USP29Q9HBJ7 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.17□□□□□ -1.9
USP29Q9HBJ7 SCARNA15.1-201ENST00000516384 125 ntBASIC3.17□□□□□ -1.9
USP29Q9HBJ7 Y_RNA.687-201ENST00000516558 91 ntBASIC3.17□□□□□ -1.9
USP29Q9HBJ7 RNU1-54P-201ENST00000517181 120 ntBASIC3.17□□□□□ -1.9
USP29Q9HBJ7 RNU6-711P-201ENST00000517255 106 ntBASIC3.17□□□□□ -1.9
USP29Q9HBJ7 TRAV32-201ENST00000553993 340 ntBASIC3.17□□□□□ -1.9
USP29Q9HBJ7 MIR4782-201ENST00000577987 79 ntBASIC3.17□□□□□ -1.9
USP29Q9HBJ7 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.17□□□□□ -1.9
USP29Q9HBJ7 AC022432.1-201ENST00000595739 310 ntBASIC3.17□□□□□ -1.9
USP29Q9HBJ7 AC011494.1-201ENST00000596454 237 ntBASIC3.17□□□□□ -1.9
USP29Q9HBJ7 AL137843.1-201ENST00000605078 385 ntBASIC3.17□□□□□ -1.9
USP29Q9HBJ7 AC080078.3-201ENST00000605407 463 ntBASIC3.17□□□□□ -1.9
USP29Q9HBJ7 AL121917.1-203ENST00000605534 577 ntBASIC3.17□□□□□ -1.9
USP29Q9HBJ7 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
USP29Q9HBJ7 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.17□□□□□ -1.9
USP29Q9HBJ7 AC090971.5-201ENST00000621102 293 ntBASIC3.17□□□□□ -1.9
USP29Q9HBJ7 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
USP29Q9HBJ7 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
USP29Q9HBJ7 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
USP29Q9HBJ7 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
USP29Q9HBJ7 MIR369-201ENST00000362155 70 ntBASIC3.16□□□□□ -1.9
USP29Q9HBJ7 SNORA51.4-201ENST00000364993 124 ntBASIC3.16□□□□□ -1.9
USP29Q9HBJ7 Y_RNA.510-201ENST00000384511 114 ntBASIC3.16□□□□□ -1.9
USP29Q9HBJ7 RNU6-658P-201ENST00000384606 106 ntBASIC3.16□□□□□ -1.9
USP29Q9HBJ7 MIR34A-201ENST00000385130 110 ntBASIC3.16□□□□□ -1.9
USP29Q9HBJ7 HMGN2P30-201ENST00000423237 256 ntBASIC3.16□□□□□ -1.9
USP29Q9HBJ7 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.16□□□□□ -1.9
USP29Q9HBJ7 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.16□□□□□ -1.9
USP29Q9HBJ7 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.16□□□□□ -1.9
USP29Q9HBJ7 Y_RNA.653-201ENST00000459091 95 ntBASIC3.16□□□□□ -1.9
USP29Q9HBJ7 snoU109.2-201ENST00000459316 135 ntBASIC3.16□□□□□ -1.9
USP29Q9HBJ7 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.16□□□□□ -1.9
USP29Q9HBJ7 RPS27AP10-201ENST00000496103 208 ntBASIC3.16□□□□□ -1.9
USP29Q9HBJ7 PTP4A1P4-201ENST00000512479 322 ntBASIC3.16□□□□□ -1.9
USP29Q9HBJ7 AC093303.1-201ENST00000514549 295 ntBASIC3.16□□□□□ -1.9
USP29Q9HBJ7 RNU6-1170P-201ENST00000515974 106 ntBASIC3.16□□□□□ -1.9
USP29Q9HBJ7 LINC00933-203ENST00000559812 219 ntBASIC3.16□□□□□ -1.9
USP29Q9HBJ7 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.16□□□□□ -1.9
USP29Q9HBJ7 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.16□□□□□ -1.9
USP29Q9HBJ7 CPDP1-201ENST00000579660 283 ntBASIC3.16□□□□□ -1.9
USP29Q9HBJ7 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.16□□□□□ -1.9
USP29Q9HBJ7 UBL5P2-201ENST00000583788 219 ntBASIC3.16□□□□□ -1.9
USP29Q9HBJ7 AC008121.1-201ENST00000603244 268 ntBASIC3.16□□□□□ -1.9
USP29Q9HBJ7 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.16□□□□□ -1.9
USP29Q9HBJ7 AC009229.3-201ENST00000608056 282 ntBASIC3.16□□□□□ -1.9
USP29Q9HBJ7 AL133215.3-201ENST00000609801 448 ntBASIC3.16□□□□□ -1.9
USP29Q9HBJ7 AL161629.2-201ENST00000615347 275 ntBASIC3.16□□□□□ -1.9
USP29Q9HBJ7 AC244517.12-201ENST00000623581 663 ntBASIC3.16□□□□□ -1.9
USP29Q9HBJ7 AC134503.1-201ENST00000633048 54 ntBASIC3.16□□□□□ -1.9
USP29Q9HBJ7 MIR622-201ENST00000638396 96 ntBASIC3.16□□□□□ -1.9
USP29Q9HBJ7 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
USP29Q9HBJ7 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
USP29Q9HBJ7 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
USP29Q9HBJ7 AC073325.2-201ENST00000339545 159 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms