Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 RNU6-572P-201ENST00000516724 80 ntBASIC3.03□□□□□ -1.92
CDT1Q9H211 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.03□□□□□ -1.92
CDT1Q9H211 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.03□□□□□ -1.92
CDT1Q9H211 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.03□□□□□ -1.92
CDT1Q9H211 AP000867.2-201ENST00000532468 320 ntBASIC3.03□□□□□ -1.92
CDT1Q9H211 MIR4790-201ENST00000577799 79 ntBASIC3.03□□□□□ -1.92
CDT1Q9H211 AC104984.5-201ENST00000586878 94 ntBASIC3.03□□□□□ -1.92
CDT1Q9H211 AL360085.1-201ENST00000604713 532 ntBASIC3.03□□□□□ -1.92
CDT1Q9H211 AC002044.1-201ENST00000606707 158 ntBASIC3.03□□□□□ -1.92
CDT1Q9H211 PART1_1.1-201ENST00000611761 217 ntBASIC3.03□□□□□ -1.92
CDT1Q9H211 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.03□□□□□ -1.92
CDT1Q9H211 AL031601.2-202ENST00000622650 282 ntBASIC3.03□□□□□ -1.92
CDT1Q9H211 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
CDT1Q9H211 U2.21-201ENST00000637295 81 ntBASIC3.03□□□□□ -1.92
CDT1Q9H211 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.03□□□□□ -1.92
CDT1Q9H211 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.03□□□□□ -1.92
CDT1Q9H211 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CDT1Q9H211 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
CDT1Q9H211 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CDT1Q9H211 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CDT1Q9H211 ZNF519P1-201ENST00000449011 1626 ntBASIC3.02□□□□□ -1.93
CDT1Q9H211 Y_RNA.135-201ENST00000363439 95 ntBASIC3.02□□□□□ -1.93
CDT1Q9H211 MIR181A2-201ENST00000384863 110 ntBASIC3.02□□□□□ -1.93
CDT1Q9H211 RNU2-3P-201ENST00000410144 191 ntBASIC3.02□□□□□ -1.93
CDT1Q9H211 AC074085.1-201ENST00000413598 418 ntBASIC3.02□□□□□ -1.93
CDT1Q9H211 CYCSP33-201ENST00000414485 327 ntBASIC3.02□□□□□ -1.93
CDT1Q9H211 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.02□□□□□ -1.93
CDT1Q9H211 RPLP0P7-201ENST00000416050 667 ntBASIC3.02□□□□□ -1.93
CDT1Q9H211 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.02□□□□□ -1.93
CDT1Q9H211 RPL7P37-201ENST00000425095 738 ntBASIC3.02□□□□□ -1.93
CDT1Q9H211 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.02□□□□□ -1.93
CDT1Q9H211 Z82205.1-201ENST00000428456 297 ntBASIC3.02□□□□□ -1.93
CDT1Q9H211 RPS29P6-201ENST00000438196 145 ntBASIC3.02□□□□□ -1.93
CDT1Q9H211 AL513043.1-201ENST00000439124 535 ntBASIC3.02□□□□□ -1.93
CDT1Q9H211 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.02□□□□□ -1.93
CDT1Q9H211 MTND1P17-201ENST00000448961 204 ntBASIC3.02□□□□□ -1.93
CDT1Q9H211 MTCO3P10-201ENST00000455912 772 ntBASIC3.02□□□□□ -1.93
CDT1Q9H211 RN7SL429P-201ENST00000479090 223 ntBASIC3.02□□□□□ -1.93
CDT1Q9H211 RN7SL489P-201ENST00000486185 223 ntBASIC3.02□□□□□ -1.93
CDT1Q9H211 RN7SL327P-201ENST00000488659 223 ntBASIC3.02□□□□□ -1.93
CDT1Q9H211 RPS29P20-201ENST00000489592 171 ntBASIC3.02□□□□□ -1.93
CDT1Q9H211 MTCO1P29-201ENST00000496868 288 ntBASIC3.02□□□□□ -1.93
CDT1Q9H211 SNORA14.1-201ENST00000516113 141 ntBASIC3.02□□□□□ -1.93
CDT1Q9H211 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.02□□□□□ -1.93
CDT1Q9H211 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.02□□□□□ -1.93
CDT1Q9H211 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.02□□□□□ -1.93
CDT1Q9H211 LRRC37A5P-203ENST00000580181 585 ntBASIC3.02□□□□□ -1.93
CDT1Q9H211 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.02□□□□□ -1.93
CDT1Q9H211 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CDT1Q9H211 AC023043.2-201ENST00000589678 1026 ntBASIC3.02□□□□□ -1.93
CDT1Q9H211 AC078795.3-201ENST00000602913 472 ntBASIC3.02□□□□□ -1.93
CDT1Q9H211 SNRPGP17-201ENST00000603780 214 ntBASIC3.02□□□□□ -1.93
CDT1Q9H211 MTND4LP5-201ENST00000605152 292 ntBASIC3.02□□□□□ -1.93
CDT1Q9H211 RN7SL853P-201ENST00000617250 223 ntBASIC3.02□□□□□ -1.93
CDT1Q9H211 AC073308.1-201ENST00000623696 305 ntBASIC3.02□□□□□ -1.93
CDT1Q9H211 U6.99-201ENST00000637524 83 ntBASIC3.02□□□□□ -1.93
CDT1Q9H211 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.02□□□□□ -1.93
CDT1Q9H211 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CDT1Q9H211 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CDT1Q9H211 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CDT1Q9H211 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.01□□□□□ -1.93
CDT1Q9H211 AC138393.1-203ENST00000327086 343 ntBASIC3.01□□□□□ -1.93
CDT1Q9H211 MIR412-201ENST00000362142 91 ntBASIC3.01□□□□□ -1.93
CDT1Q9H211 RNU6-778P-201ENST00000363269 103 ntBASIC3.01□□□□□ -1.93
CDT1Q9H211 RNU6-384P-201ENST00000364900 104 ntBASIC3.01□□□□□ -1.93
CDT1Q9H211 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.01□□□□□ -1.93
CDT1Q9H211 RNU6-1013P-201ENST00000384180 107 ntBASIC3.01□□□□□ -1.93
CDT1Q9H211 RNU6-166P-201ENST00000384371 107 ntBASIC3.01□□□□□ -1.93
CDT1Q9H211 RNU6-1297P-201ENST00000384415 104 ntBASIC3.01□□□□□ -1.93
CDT1Q9H211 MIR559-201ENST00000385188 96 ntBASIC3.01□□□□□ -1.93
CDT1Q9H211 RNU6-308P-201ENST00000390957 107 ntBASIC3.01□□□□□ -1.93
CDT1Q9H211 RNY4P36-201ENST00000391116 96 ntBASIC3.01□□□□□ -1.93
CDT1Q9H211 AL360182.1-201ENST00000397433 468 ntBASIC3.01□□□□□ -1.93
CDT1Q9H211 RNU6-370P-201ENST00000411008 104 ntBASIC3.01□□□□□ -1.93
CDT1Q9H211 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.01□□□□□ -1.93
CDT1Q9H211 HMGN2P30-201ENST00000423237 256 ntBASIC3.01□□□□□ -1.93
CDT1Q9H211 AC236972.2-201ENST00000434979 310 ntBASIC3.01□□□□□ -1.93
CDT1Q9H211 AC010099.1-201ENST00000455434 375 ntBASIC3.01□□□□□ -1.93
CDT1Q9H211 AC092798.1-201ENST00000458542 409 ntBASIC3.01□□□□□ -1.93
CDT1Q9H211 Y_RNA.639-201ENST00000458981 102 ntBASIC3.01□□□□□ -1.93
CDT1Q9H211 HMGB1P30-201ENST00000492455 606 ntBASIC3.01□□□□□ -1.93
CDT1Q9H211 RPS27P27-201ENST00000498779 255 ntBASIC3.01□□□□□ -1.93
CDT1Q9H211 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.01□□□□□ -1.93
CDT1Q9H211 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.01□□□□□ -1.93
CDT1Q9H211 RNU6-703P-201ENST00000516946 107 ntBASIC3.01□□□□□ -1.93
CDT1Q9H211 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.01□□□□□ -1.93
CDT1Q9H211 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.01□□□□□ -1.93
CDT1Q9H211 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.01□□□□□ -1.93
CDT1Q9H211 MIR4319-201ENST00000577285 85 ntBASIC3.01□□□□□ -1.93
CDT1Q9H211 MTCO3P13-201ENST00000577757 781 ntBASIC3.01□□□□□ -1.93
CDT1Q9H211 ZNF861P-201ENST00000588126 639 ntBASIC3.01□□□□□ -1.93
CDT1Q9H211 AC080078.3-201ENST00000605407 463 ntBASIC3.01□□□□□ -1.93
CDT1Q9H211 AL080274.1-201ENST00000605565 220 ntBASIC3.01□□□□□ -1.93
CDT1Q9H211 AC004832.5-201ENST00000608677 401 ntBASIC3.01□□□□□ -1.93
CDT1Q9H211 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.01□□□□□ -1.93
CDT1Q9H211 AL133215.3-201ENST00000609801 448 ntBASIC3.01□□□□□ -1.93
CDT1Q9H211 AC090971.5-201ENST00000621102 293 ntBASIC3.01□□□□□ -1.93
CDT1Q9H211 AC134503.1-201ENST00000633048 54 ntBASIC3.01□□□□□ -1.93
CDT1Q9H211 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CDT1Q9H211 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms