Protein–RNA interactions for Protein: Q9C0C4

SEMA4C, Semaphorin-4C, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4CQ9C0C4 RNU6-25P-201ENST00000383873 107 ntBASIC3.21□□□□□ -1.9
SEMA4CQ9C0C4 RNU6-1-201ENST00000383898 107 ntBASIC3.21□□□□□ -1.9
SEMA4CQ9C0C4 Y_RNA.396-201ENST00000383949 103 ntBASIC3.21□□□□□ -1.9
SEMA4CQ9C0C4 RNU6-48P-201ENST00000384161 107 ntBASIC3.21□□□□□ -1.9
SEMA4CQ9C0C4 RNU6-36P-201ENST00000384172 107 ntBASIC3.21□□□□□ -1.9
SEMA4CQ9C0C4 RNU6-4P-201ENST00000384205 107 ntBASIC3.21□□□□□ -1.9
SEMA4CQ9C0C4 RNU6-5P-201ENST00000384238 107 ntBASIC3.21□□□□□ -1.9
SEMA4CQ9C0C4 RNU6-3P-201ENST00000384314 107 ntBASIC3.21□□□□□ -1.9
SEMA4CQ9C0C4 RNU6-16P-201ENST00000384385 107 ntBASIC3.21□□□□□ -1.9
SEMA4CQ9C0C4 RNU6-15P-201ENST00000384534 107 ntBASIC3.21□□□□□ -1.9
SEMA4CQ9C0C4 RNU6-2-201ENST00000384627 107 ntBASIC3.21□□□□□ -1.9
SEMA4CQ9C0C4 RNU6-29P-201ENST00000384637 107 ntBASIC3.21□□□□□ -1.9
SEMA4CQ9C0C4 RNU6-9-201ENST00000384776 107 ntBASIC3.21□□□□□ -1.9
SEMA4CQ9C0C4 RNU6-33P-201ENST00000384793 107 ntBASIC3.21□□□□□ -1.9
SEMA4CQ9C0C4 AL357075.1-201ENST00000404107 726 ntBASIC3.21□□□□□ -1.9
SEMA4CQ9C0C4 RN7SKP58-201ENST00000411010 305 ntBASIC3.21□□□□□ -1.9
SEMA4CQ9C0C4 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.21□□□□□ -1.9
SEMA4CQ9C0C4 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SEMA4CQ9C0C4 UBE2D3P2-201ENST00000424409 445 ntBASIC3.21□□□□□ -1.9
SEMA4CQ9C0C4 AL645568.3-201ENST00000433683 316 ntBASIC3.21□□□□□ -1.9
SEMA4CQ9C0C4 AC107083.1-201ENST00000439643 279 ntBASIC3.21□□□□□ -1.9
SEMA4CQ9C0C4 DYNLT3P2-201ENST00000442517 295 ntBASIC3.21□□□□□ -1.9
SEMA4CQ9C0C4 SSXP4-201ENST00000451349 245 ntBASIC3.21□□□□□ -1.9
SEMA4CQ9C0C4 AC010285.1-201ENST00000470580 392 ntBASIC3.21□□□□□ -1.9
SEMA4CQ9C0C4 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.21□□□□□ -1.9
SEMA4CQ9C0C4 RNU6-388P-201ENST00000517012 105 ntBASIC3.21□□□□□ -1.9
SEMA4CQ9C0C4 RNU6-389P-201ENST00000517048 105 ntBASIC3.21□□□□□ -1.9
SEMA4CQ9C0C4 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.21□□□□□ -1.9
SEMA4CQ9C0C4 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.21□□□□□ -1.9
SEMA4CQ9C0C4 AC022080.3-201ENST00000544433 482 ntBASIC3.21□□□□□ -1.9
SEMA4CQ9C0C4 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.21□□□□□ -1.9
SEMA4CQ9C0C4 TRAV32-201ENST00000553993 340 ntBASIC3.21□□□□□ -1.9
SEMA4CQ9C0C4 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SEMA4CQ9C0C4 MIR4273-201ENST00000582824 84 ntBASIC3.21□□□□□ -1.9
SEMA4CQ9C0C4 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.21□□□□□ -1.9
SEMA4CQ9C0C4 RNU6-6P-201ENST00000606623 107 ntBASIC3.21□□□□□ -1.9
SEMA4CQ9C0C4 AC034102.8-201ENST00000615146 484 ntBASIC3.21□□□□□ -1.9
SEMA4CQ9C0C4 AL606534.2-204ENST00000635008 178 ntBASIC3.21□□□□□ -1.9
SEMA4CQ9C0C4 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
SEMA4CQ9C0C4 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SEMA4CQ9C0C4 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SEMA4CQ9C0C4 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SEMA4CQ9C0C4 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SEMA4CQ9C0C4 Y_RNA.39-201ENST00000362620 98 ntBASIC3.2□□□□□ -1.9
SEMA4CQ9C0C4 Y_RNA.106-201ENST00000363189 100 ntBASIC3.2□□□□□ -1.9
SEMA4CQ9C0C4 RNU6-1167P-201ENST00000363227 94 ntBASIC3.2□□□□□ -1.9
SEMA4CQ9C0C4 RNU1-115P-201ENST00000365329 160 ntBASIC3.2□□□□□ -1.9
SEMA4CQ9C0C4 MIR514A1-201ENST00000385133 98 ntBASIC3.2□□□□□ -1.9
SEMA4CQ9C0C4 RNU6-1109P-201ENST00000391187 107 ntBASIC3.2□□□□□ -1.9
SEMA4CQ9C0C4 MIR1261-201ENST00000408659 82 ntBASIC3.2□□□□□ -1.9
SEMA4CQ9C0C4 RNU6-1025P-201ENST00000410629 104 ntBASIC3.2□□□□□ -1.9
SEMA4CQ9C0C4 Y_RNA.618-201ENST00000410949 107 ntBASIC3.2□□□□□ -1.9
SEMA4CQ9C0C4 RNU6-607P-201ENST00000411283 108 ntBASIC3.2□□□□□ -1.9
SEMA4CQ9C0C4 AL513331.1-201ENST00000411908 397 ntBASIC3.2□□□□□ -1.9
SEMA4CQ9C0C4 RPL21P66-201ENST00000426566 466 ntBASIC3.2□□□□□ -1.9
SEMA4CQ9C0C4 TRIAP1P1-201ENST00000427062 225 ntBASIC3.2□□□□□ -1.9
SEMA4CQ9C0C4 AC007919.1-201ENST00000429380 217 ntBASIC3.2□□□□□ -1.9
SEMA4CQ9C0C4 RPS15AP10-201ENST00000432472 382 ntBASIC3.2□□□□□ -1.9
SEMA4CQ9C0C4 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC3.2□□□□□ -1.9
SEMA4CQ9C0C4 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.2□□□□□ -1.9
SEMA4CQ9C0C4 AL357552.1-201ENST00000445254 415 ntBASIC3.2□□□□□ -1.9
SEMA4CQ9C0C4 RPL23AP31-201ENST00000456160 467 ntBASIC3.2□□□□□ -1.9
SEMA4CQ9C0C4 RPS23P3-201ENST00000470993 430 ntBASIC3.2□□□□□ -1.9
SEMA4CQ9C0C4 AC116655.1-201ENST00000508324 901 ntBASIC3.2□□□□□ -1.9
SEMA4CQ9C0C4 RNU6-1256P-201ENST00000516539 103 ntBASIC3.2□□□□□ -1.9
SEMA4CQ9C0C4 AP004371.1-201ENST00000525240 214 ntBASIC3.2□□□□□ -1.9
SEMA4CQ9C0C4 AC023442.1-201ENST00000531247 422 ntBASIC3.2□□□□□ -1.9
SEMA4CQ9C0C4 GNAI2P1-201ENST00000541815 315 ntBASIC3.2□□□□□ -1.9
SEMA4CQ9C0C4 AC011602.1-201ENST00000546484 331 ntBASIC3.2□□□□□ -1.9
SEMA4CQ9C0C4 TRAV37-201ENST00000553906 342 ntBASIC3.2□□□□□ -1.9
SEMA4CQ9C0C4 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.2□□□□□ -1.9
SEMA4CQ9C0C4 MYL12BP1-201ENST00000569826 507 ntBASIC3.2□□□□□ -1.9
SEMA4CQ9C0C4 LRRC37A5P-203ENST00000580181 585 ntBASIC3.2□□□□□ -1.9
SEMA4CQ9C0C4 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.2□□□□□ -1.9
SEMA4CQ9C0C4 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.2□□□□□ -1.9
SEMA4CQ9C0C4 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.2□□□□□ -1.9
SEMA4CQ9C0C4 AC006557.5-201ENST00000603126 811 ntBASIC3.2□□□□□ -1.9
SEMA4CQ9C0C4 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.2□□□□□ -1.9
SEMA4CQ9C0C4 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.2□□□□□ -1.9
SEMA4CQ9C0C4 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.2□□□□□ -1.9
SEMA4CQ9C0C4 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.2□□□□□ -1.9
SEMA4CQ9C0C4 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.2□□□□□ -1.9
SEMA4CQ9C0C4 AC093010.3-201ENST00000570269 15214 ntBASIC3.2□□□□□ -1.9
SEMA4CQ9C0C4 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.2□□□□□ -1.9
SEMA4CQ9C0C4 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.2□□□□□ -1.9
SEMA4CQ9C0C4 AC007496.3-201ENST00000624987 3443 ntBASIC3.2□□□□□ -1.9
SEMA4CQ9C0C4 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SEMA4CQ9C0C4 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
SEMA4CQ9C0C4 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
SEMA4CQ9C0C4 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.19□□□□□ -1.9
SEMA4CQ9C0C4 AC004925.1-201ENST00000624256 2706 ntBASIC3.19□□□□□ -1.9
SEMA4CQ9C0C4 Y_RNA.26-201ENST00000362539 101 ntBASIC3.19□□□□□ -1.9
SEMA4CQ9C0C4 Y_RNA.222-201ENST00000364264 102 ntBASIC3.19□□□□□ -1.9
SEMA4CQ9C0C4 RNU6-1317P-201ENST00000364582 104 ntBASIC3.19□□□□□ -1.9
SEMA4CQ9C0C4 Y_RNA.476-201ENST00000384347 108 ntBASIC3.19□□□□□ -1.9
SEMA4CQ9C0C4 Y_RNA.533-201ENST00000384596 114 ntBASIC3.19□□□□□ -1.9
SEMA4CQ9C0C4 SNORA41-201ENST00000384675 132 ntBASIC3.19□□□□□ -1.9
SEMA4CQ9C0C4 RNU6-1156P-201ENST00000410365 100 ntBASIC3.19□□□□□ -1.9
SEMA4CQ9C0C4 AL353621.1-201ENST00000418219 243 ntBASIC3.19□□□□□ -1.9
SEMA4CQ9C0C4 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 162.1 ms