Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 AC090897.2-201ENST00000581715 130 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 MIR4470-201ENST00000583453 72 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 MIR4438-201ENST00000585271 93 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 RPL17P51-201ENST00000605218 238 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 FAM25E-202ENST00000608562 189 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 MIR6885-201ENST00000612241 66 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 HOTTIP_2.1-201ENST00000616633 376 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 AC244100.4-201ENST00000617747 388 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 AC007318.2-201ENST00000620999 243 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 U4.3-201ENST00000621047 82 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 AL138693.1-201ENST00000622219 129 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 SNORA43.5-201ENST00000631270 138 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 AC013268.3-201ENST00000262716 2324 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 NR3C1-205ENST00000415690 3789 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 OR11G2-202ENST00000641682 3786 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 FIGNL1-213ENST00000615084 3368 ntAPPRIS P1 TSL 3 BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 AL117339.4-201ENST00000608335 7063 ntBASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 OTUD4P1-201ENST00000237841 3067 ntBASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 AC133552.1-201ENST00000569988 4007 ntBASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 MAPK10-270ENST00000641102 3538 ntBASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 Y_RNA.15-201ENST00000362420 102 ntBASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 RNU6-1128P-201ENST00000362825 109 ntBASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 SNORD1B-201ENST00000363091 84 ntBASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 RNU6-1155P-201ENST00000363554 107 ntBASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 RNA5SP48-201ENST00000363969 126 ntBASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 RNVU1-3-201ENST00000364313 161 ntBASIC1.29□□□□□ -2.2
KRTAP4-4Q9BYR3 RNU6-990P-201ENST00000364385 104 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms