Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 SNORA20B-201ENST00000384220 132 ntBASIC4.52□□□□□ -1.69
COL25A1Q9BXS0 MIR1250-201ENST00000408098 113 ntBASIC4.52□□□□□ -1.69
COL25A1Q9BXS0 U3.40-201ENST00000408706 208 ntBASIC4.52□□□□□ -1.69
COL25A1Q9BXS0 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.52□□□□□ -1.69
COL25A1Q9BXS0 RNU6-65P-201ENST00000516332 98 ntBASIC4.52□□□□□ -1.69
COL25A1Q9BXS0 AC090142.3-201ENST00000519012 385 ntBASIC4.52□□□□□ -1.69
COL25A1Q9BXS0 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.52□□□□□ -1.69
COL25A1Q9BXS0 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC4.52□□□□□ -1.69
COL25A1Q9BXS0 AP001005.3-201ENST00000622049 129 ntBASIC4.52□□□□□ -1.69
COL25A1Q9BXS0 AC027309.3-201ENST00000623419 351 ntBASIC4.52□□□□□ -1.69
COL25A1Q9BXS0 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.52□□□□□ -1.69
COL25A1Q9BXS0 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
COL25A1Q9BXS0 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
COL25A1Q9BXS0 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.52□□□□□ -1.69
COL25A1Q9BXS0 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
COL25A1Q9BXS0 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
COL25A1Q9BXS0 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL25A1Q9BXS0 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.51□□□□□ -1.69
COL25A1Q9BXS0 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
COL25A1Q9BXS0 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
COL25A1Q9BXS0 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.51□□□□□ -1.69
COL25A1Q9BXS0 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL25A1Q9BXS0 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL25A1Q9BXS0 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL25A1Q9BXS0 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.51□□□□□ -1.69
COL25A1Q9BXS0 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
COL25A1Q9BXS0 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL25A1Q9BXS0 Y_RNA.114-201ENST00000363265 113 ntBASIC4.51□□□□□ -1.69
COL25A1Q9BXS0 RNU5F-3P-201ENST00000363767 117 ntBASIC4.51□□□□□ -1.69
COL25A1Q9BXS0 MIR548A1-201ENST00000385041 97 ntBASIC4.51□□□□□ -1.69
COL25A1Q9BXS0 RN7SKP156-201ENST00000410308 342 ntBASIC4.51□□□□□ -1.69
COL25A1Q9BXS0 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.51□□□□□ -1.69
COL25A1Q9BXS0 AC099522.1-202ENST00000514718 367 ntBASIC4.51□□□□□ -1.69
COL25A1Q9BXS0 SNORA43.2-201ENST00000516652 128 ntBASIC4.51□□□□□ -1.69
COL25A1Q9BXS0 RNA5SP54-201ENST00000516951 92 ntBASIC4.51□□□□□ -1.69
COL25A1Q9BXS0 RNU2-12P-201ENST00000517216 168 ntBASIC4.51□□□□□ -1.69
COL25A1Q9BXS0 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC4.51□□□□□ -1.69
COL25A1Q9BXS0 MIR5688-201ENST00000580619 83 ntBASIC4.51□□□□□ -1.69
COL25A1Q9BXS0 AP001318.4-201ENST00000616637 121 ntBASIC4.51□□□□□ -1.69
COL25A1Q9BXS0 MIR3674-201ENST00000636576 68 ntBASIC4.51□□□□□ -1.69
COL25A1Q9BXS0 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.51□□□□□ -1.69
COL25A1Q9BXS0 AL596275.2-206ENST00000641957 626 ntBASIC4.51□□□□□ -1.69
COL25A1Q9BXS0 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
COL25A1Q9BXS0 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.51□□□□□ -1.69
COL25A1Q9BXS0 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL25A1Q9BXS0 AC093535.2-201ENST00000624769 2326 ntBASIC4.51□□□□□ -1.69
COL25A1Q9BXS0 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
COL25A1Q9BXS0 USP8P1-201ENST00000494673 3183 ntBASIC4.51□□□□□ -1.69
COL25A1Q9BXS0 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COL25A1Q9BXS0 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL25A1Q9BXS0 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL25A1Q9BXS0 SMG1P4-204ENST00000523028 4131 ntBASIC4.5□□□□□ -1.69
COL25A1Q9BXS0 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COL25A1Q9BXS0 Y_RNA.179-201ENST00000363844 90 ntBASIC4.5□□□□□ -1.69
COL25A1Q9BXS0 Y_RNA.229-201ENST00000364347 113 ntBASIC4.5□□□□□ -1.69
COL25A1Q9BXS0 RNU6-597P-201ENST00000365620 102 ntBASIC4.5□□□□□ -1.69
COL25A1Q9BXS0 RNU6-573P-201ENST00000383938 106 ntBASIC4.5□□□□□ -1.69
COL25A1Q9BXS0 AL512604.1-201ENST00000404812 257 ntBASIC4.5□□□□□ -1.69
COL25A1Q9BXS0 RNU6-554P-201ENST00000410466 106 ntBASIC4.5□□□□□ -1.69
COL25A1Q9BXS0 RNU4-43P-201ENST00000410628 137 ntBASIC4.5□□□□□ -1.69
COL25A1Q9BXS0 RN7SKP53-201ENST00000411337 315 ntBASIC4.5□□□□□ -1.69
COL25A1Q9BXS0 AC096649.2-201ENST00000416186 393 ntBASIC4.5□□□□□ -1.69
COL25A1Q9BXS0 Z82209.1-201ENST00000422141 2135 ntBASIC4.5□□□□□ -1.69
COL25A1Q9BXS0 AC138761.5-201ENST00000433967 325 ntBASIC4.5□□□□□ -1.69
COL25A1Q9BXS0 AC004386.2-201ENST00000441858 148 ntBASIC4.5□□□□□ -1.69
COL25A1Q9BXS0 ANP32BP2-201ENST00000454525 545 ntBASIC4.5□□□□□ -1.69
COL25A1Q9BXS0 snoU13.3-201ENST00000459441 104 ntBASIC4.5□□□□□ -1.69
COL25A1Q9BXS0 AL049874.1-201ENST00000489560 388 ntBASIC4.5□□□□□ -1.69
COL25A1Q9BXS0 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.5□□□□□ -1.69
COL25A1Q9BXS0 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.5□□□□□ -1.69
COL25A1Q9BXS0 AC006199.1-201ENST00000548728 219 ntBASIC4.5□□□□□ -1.69
COL25A1Q9BXS0 GNRHR2P1-201ENST00000555315 631 ntBASIC4.5□□□□□ -1.69
COL25A1Q9BXS0 AC060780.2-201ENST00000589047 198 ntBASIC4.5□□□□□ -1.69
COL25A1Q9BXS0 AC006380.1-201ENST00000603598 186 ntBASIC4.5□□□□□ -1.69
COL25A1Q9BXS0 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.5□□□□□ -1.69
COL25A1Q9BXS0 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COL25A1Q9BXS0 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL25A1Q9BXS0 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL25A1Q9BXS0 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
COL25A1Q9BXS0 AL133243.3-201ENST00000617415 3004 ntBASIC4.5□□□□□ -1.69
COL25A1Q9BXS0 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
COL25A1Q9BXS0 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.5□□□□□ -1.69
COL25A1Q9BXS0 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.5□□□□□ -1.69
COL25A1Q9BXS0 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.49□□□□□ -1.69
COL25A1Q9BXS0 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL25A1Q9BXS0 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.49□□□□□ -1.69
COL25A1Q9BXS0 AC099654.7-201ENST00000635788 2127 ntBASIC4.49□□□□□ -1.69
COL25A1Q9BXS0 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL25A1Q9BXS0 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.49□□□□□ -1.69
COL25A1Q9BXS0 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL25A1Q9BXS0 AC006971.1-201ENST00000407916 4486 ntBASIC4.49□□□□□ -1.69
COL25A1Q9BXS0 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.49□□□□□ -1.69
COL25A1Q9BXS0 AC138915.1-201ENST00000565427 1685 ntBASIC4.49□□□□□ -1.69
COL25A1Q9BXS0 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.49□□□□□ -1.69
COL25A1Q9BXS0 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL25A1Q9BXS0 RNU6-324P-201ENST00000363957 106 ntBASIC4.49□□□□□ -1.69
COL25A1Q9BXS0 Y_RNA.245-201ENST00000364493 95 ntBASIC4.49□□□□□ -1.69
COL25A1Q9BXS0 U8.11-201ENST00000384699 133 ntBASIC4.49□□□□□ -1.69
COL25A1Q9BXS0 U8.12-201ENST00000384701 133 ntBASIC4.49□□□□□ -1.69
COL25A1Q9BXS0 MIR514A1-201ENST00000385133 98 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms