Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 Y_RNA.446-201ENST00000384178 104 ntBASIC3.4□□□□□ -1.87
SSBP3Q9BWW4 SNORA40.19-201ENST00000390846 128 ntBASIC3.4□□□□□ -1.87
SSBP3Q9BWW4 Y_RNA.580-201ENST00000391004 95 ntBASIC3.4□□□□□ -1.87
SSBP3Q9BWW4 RNA5SP213-201ENST00000391031 106 ntBASIC3.4□□□□□ -1.87
SSBP3Q9BWW4 RNU6-1245P-201ENST00000411130 106 ntBASIC3.4□□□□□ -1.87
SSBP3Q9BWW4 NDUFB4P7-201ENST00000423198 363 ntBASIC3.4□□□□□ -1.87
SSBP3Q9BWW4 AL691449.1-201ENST00000426570 421 ntBASIC3.4□□□□□ -1.87
SSBP3Q9BWW4 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.4□□□□□ -1.87
SSBP3Q9BWW4 CYCSP32-201ENST00000440548 321 ntBASIC3.4□□□□□ -1.87
SSBP3Q9BWW4 RPL26P26-201ENST00000480251 434 ntBASIC3.4□□□□□ -1.87
SSBP3Q9BWW4 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.4□□□□□ -1.87
SSBP3Q9BWW4 RNU6-567P-201ENST00000516746 107 ntBASIC3.4□□□□□ -1.87
SSBP3Q9BWW4 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC3.4□□□□□ -1.87
SSBP3Q9BWW4 AC107016.1-201ENST00000550463 337 ntBASIC3.4□□□□□ -1.87
SSBP3Q9BWW4 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.4□□□□□ -1.87
SSBP3Q9BWW4 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SSBP3Q9BWW4 AC025627.2-201ENST00000576220 160 ntBASIC3.4□□□□□ -1.87
SSBP3Q9BWW4 MIR4782-201ENST00000577987 79 ntBASIC3.4□□□□□ -1.87
SSBP3Q9BWW4 MIR5684-201ENST00000585074 65 ntBASIC3.4□□□□□ -1.87
SSBP3Q9BWW4 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.4□□□□□ -1.87
SSBP3Q9BWW4 AP002826.1-201ENST00000608835 315 ntBASIC3.4□□□□□ -1.87
SSBP3Q9BWW4 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.4□□□□□ -1.87
SSBP3Q9BWW4 MIR7151-201ENST00000617477 60 ntBASIC3.4□□□□□ -1.87
SSBP3Q9BWW4 U6.99-201ENST00000637524 83 ntBASIC3.4□□□□□ -1.87
SSBP3Q9BWW4 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
SSBP3Q9BWW4 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.4□□□□□ -1.87
SSBP3Q9BWW4 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.4□□□□□ -1.87
SSBP3Q9BWW4 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.4□□□□□ -1.87
SSBP3Q9BWW4 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SSBP3Q9BWW4 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SSBP3Q9BWW4 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SSBP3Q9BWW4 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.4□□□□□ -1.87
SSBP3Q9BWW4 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SSBP3Q9BWW4 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.39□□□□□ -1.87
SSBP3Q9BWW4 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
SSBP3Q9BWW4 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.39□□□□□ -1.87
SSBP3Q9BWW4 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SSBP3Q9BWW4 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SSBP3Q9BWW4 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.39□□□□□ -1.87
SSBP3Q9BWW4 SNORD35B-201ENST00000363660 87 ntBASIC3.39□□□□□ -1.87
SSBP3Q9BWW4 AL133412.1-201ENST00000380194 2992 ntBASIC3.39□□□□□ -1.87
SSBP3Q9BWW4 RNU6-741P-201ENST00000383889 107 ntBASIC3.39□□□□□ -1.87
SSBP3Q9BWW4 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SSBP3Q9BWW4 Y_RNA.597-201ENST00000410463 100 ntBASIC3.39□□□□□ -1.87
SSBP3Q9BWW4 AL590383.1-201ENST00000428602 75 ntBASIC3.39□□□□□ -1.87
SSBP3Q9BWW4 WARS2P1-201ENST00000429678 537 ntBASIC3.39□□□□□ -1.87
SSBP3Q9BWW4 UQCRBP2-201ENST00000447827 297 ntBASIC3.39□□□□□ -1.87
SSBP3Q9BWW4 MRPS10P1-201ENST00000448483 130 ntBASIC3.39□□□□□ -1.87
SSBP3Q9BWW4 AC026402.1-201ENST00000513642 170 ntBASIC3.39□□□□□ -1.87
SSBP3Q9BWW4 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.39□□□□□ -1.87
SSBP3Q9BWW4 MIR5695-201ENST00000579717 85 ntBASIC3.39□□□□□ -1.87
SSBP3Q9BWW4 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SSBP3Q9BWW4 AC005828.6-201ENST00000606610 232 ntBASIC3.39□□□□□ -1.87
SSBP3Q9BWW4 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.39□□□□□ -1.87
SSBP3Q9BWW4 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.39□□□□□ -1.87
SSBP3Q9BWW4 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.39□□□□□ -1.87
SSBP3Q9BWW4 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.39□□□□□ -1.87
SSBP3Q9BWW4 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SSBP3Q9BWW4 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
SSBP3Q9BWW4 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
SSBP3Q9BWW4 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
SSBP3Q9BWW4 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.39□□□□□ -1.87
SSBP3Q9BWW4 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SSBP3Q9BWW4 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SSBP3Q9BWW4 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SSBP3Q9BWW4 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SSBP3Q9BWW4 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
SSBP3Q9BWW4 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SSBP3Q9BWW4 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SSBP3Q9BWW4 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SSBP3Q9BWW4 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SSBP3Q9BWW4 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SSBP3Q9BWW4 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SSBP3Q9BWW4 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SSBP3Q9BWW4 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.38□□□□□ -1.87
SSBP3Q9BWW4 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SSBP3Q9BWW4 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
SSBP3Q9BWW4 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SSBP3Q9BWW4 RNU6-137P-201ENST00000363680 108 ntBASIC3.38□□□□□ -1.87
SSBP3Q9BWW4 RNU1-64P-201ENST00000365443 163 ntBASIC3.38□□□□□ -1.87
SSBP3Q9BWW4 Y_RNA.488-201ENST00000384403 102 ntBASIC3.38□□□□□ -1.87
SSBP3Q9BWW4 U3.37-201ENST00000408528 213 ntBASIC3.38□□□□□ -1.87
SSBP3Q9BWW4 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.38□□□□□ -1.87
SSBP3Q9BWW4 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.38□□□□□ -1.87
SSBP3Q9BWW4 SSXP4-201ENST00000451349 245 ntBASIC3.38□□□□□ -1.87
SSBP3Q9BWW4 KC877373.1-201ENST00000479066 408 ntBASIC3.38□□□□□ -1.87
SSBP3Q9BWW4 SNORA40.9-201ENST00000515895 93 ntBASIC3.38□□□□□ -1.87
SSBP3Q9BWW4 RNU6-1198P-201ENST00000516904 67 ntBASIC3.38□□□□□ -1.87
SSBP3Q9BWW4 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.38□□□□□ -1.87
SSBP3Q9BWW4 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.38□□□□□ -1.87
SSBP3Q9BWW4 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.38□□□□□ -1.87
SSBP3Q9BWW4 AC053481.4-201ENST00000583164 216 ntBASIC3.38□□□□□ -1.87
SSBP3Q9BWW4 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC3.38□□□□□ -1.87
SSBP3Q9BWW4 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.38□□□□□ -1.87
SSBP3Q9BWW4 AL138963.2-201ENST00000605137 226 ntBASIC3.38□□□□□ -1.87
SSBP3Q9BWW4 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SSBP3Q9BWW4 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.38□□□□□ -1.87
SSBP3Q9BWW4 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
SSBP3Q9BWW4 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SSBP3Q9BWW4 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms