Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
EBF4Q9BQW3 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
EBF4Q9BQW3 RNU4-20P-201ENST00000365601 151 ntBASIC2.04□□□□□ -2.08
EBF4Q9BQW3 RNU6-395P-201ENST00000365662 106 ntBASIC2.04□□□□□ -2.08
EBF4Q9BQW3 RNU6-1029P-201ENST00000384109 107 ntBASIC2.04□□□□□ -2.08
EBF4Q9BQW3 MIR454-201ENST00000390180 115 ntBASIC2.04□□□□□ -2.08
EBF4Q9BQW3 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
EBF4Q9BQW3 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.04□□□□□ -2.08
EBF4Q9BQW3 RNU6-1148P-201ENST00000410992 104 ntBASIC2.04□□□□□ -2.08
EBF4Q9BQW3 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.04□□□□□ -2.08
EBF4Q9BQW3 AC016831.2-201ENST00000417179 352 ntBASIC2.04□□□□□ -2.08
EBF4Q9BQW3 MTND4LP11-201ENST00000422184 280 ntBASIC2.04□□□□□ -2.08
EBF4Q9BQW3 SRIP2-201ENST00000428470 166 ntBASIC2.04□□□□□ -2.08
EBF4Q9BQW3 TIMM9P3-201ENST00000428659 274 ntBASIC2.04□□□□□ -2.08
EBF4Q9BQW3 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.04□□□□□ -2.08
EBF4Q9BQW3 IPO7P1-201ENST00000442031 636 ntBASIC2.04□□□□□ -2.08
EBF4Q9BQW3 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.04□□□□□ -2.08
EBF4Q9BQW3 AC079781.2-201ENST00000446424 169 ntBASIC2.04□□□□□ -2.08
EBF4Q9BQW3 AL360271.2-201ENST00000447710 161 ntBASIC2.04□□□□□ -2.08
EBF4Q9BQW3 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.04□□□□□ -2.08
EBF4Q9BQW3 AC022364.2-201ENST00000457963 554 ntBASIC2.04□□□□□ -2.08
EBF4Q9BQW3 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.04□□□□□ -2.08
EBF4Q9BQW3 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.04□□□□□ -2.08
EBF4Q9BQW3 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.04□□□□□ -2.08
EBF4Q9BQW3 RNU6-1038P-201ENST00000516516 104 ntBASIC2.04□□□□□ -2.08
EBF4Q9BQW3 SCARNA16.3-201ENST00000516595 184 ntBASIC2.04□□□□□ -2.08
EBF4Q9BQW3 SNORA70.24-201ENST00000517233 118 ntBASIC2.04□□□□□ -2.08
EBF4Q9BQW3 SCARNA11.3-201ENST00000517276 130 ntBASIC2.04□□□□□ -2.08
EBF4Q9BQW3 BTF3P12-201ENST00000519620 469 ntBASIC2.04□□□□□ -2.08
EBF4Q9BQW3 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.04□□□□□ -2.08
EBF4Q9BQW3 AL157687.1-201ENST00000554853 619 ntBASIC2.04□□□□□ -2.08
EBF4Q9BQW3 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.04□□□□□ -2.08
EBF4Q9BQW3 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.04□□□□□ -2.08
EBF4Q9BQW3 AC106782.4-201ENST00000568264 210 ntBASIC2.04□□□□□ -2.08
EBF4Q9BQW3 AC007151.1-201ENST00000572774 483 ntBASIC2.04□□□□□ -2.08
EBF4Q9BQW3 SNORA59B-202ENST00000578183 701 ntBASIC2.04□□□□□ -2.08
EBF4Q9BQW3 AC008121.1-201ENST00000603244 268 ntBASIC2.04□□□□□ -2.08
EBF4Q9BQW3 AL356280.1-201ENST00000603614 379 ntBASIC2.04□□□□□ -2.08
EBF4Q9BQW3 AC010378.1-201ENST00000619270 362 ntBASIC2.04□□□□□ -2.08
EBF4Q9BQW3 MIR3662-201ENST00000637030 95 ntBASIC2.04□□□□□ -2.08
EBF4Q9BQW3 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
EBF4Q9BQW3 Y_RNA.88-201ENST00000363029 99 ntBASIC2.03□□□□□ -2.08
EBF4Q9BQW3 SNORA80A-201ENST00000363922 136 ntBASIC2.03□□□□□ -2.08
EBF4Q9BQW3 RNU6-1322P-201ENST00000364309 107 ntBASIC2.03□□□□□ -2.08
EBF4Q9BQW3 RNU6-996P-201ENST00000365438 107 ntBASIC2.03□□□□□ -2.08
EBF4Q9BQW3 RNU4-48P-201ENST00000365559 182 ntBASIC2.03□□□□□ -2.08
EBF4Q9BQW3 U3.26-201ENST00000391236 204 ntBASIC2.03□□□□□ -2.08
EBF4Q9BQW3 RNU6-903P-201ENST00000391270 109 ntBASIC2.03□□□□□ -2.08
EBF4Q9BQW3 Y_RNA.604-201ENST00000410574 102 ntBASIC2.03□□□□□ -2.08
EBF4Q9BQW3 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.03□□□□□ -2.08
EBF4Q9BQW3 AC004383.1-201ENST00000438135 289 ntBASIC2.03□□□□□ -2.08
EBF4Q9BQW3 AL445687.1-201ENST00000439946 251 ntBASIC2.03□□□□□ -2.08
EBF4Q9BQW3 AL353572.1-201ENST00000442490 417 ntBASIC2.03□□□□□ -2.08
EBF4Q9BQW3 OSTCP8-201ENST00000445117 448 ntBASIC2.03□□□□□ -2.08
EBF4Q9BQW3 IFNA11P-201ENST00000446352 526 ntBASIC2.03□□□□□ -2.08
EBF4Q9BQW3 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.03□□□□□ -2.08
EBF4Q9BQW3 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.03□□□□□ -2.08
EBF4Q9BQW3 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.03□□□□□ -2.08
EBF4Q9BQW3 MTCYBP18-201ENST00000501056 747 ntBASIC2.03□□□□□ -2.08
EBF4Q9BQW3 SNORD19.2-201ENST00000516978 73 ntBASIC2.03□□□□□ -2.08
EBF4Q9BQW3 AL118558.2-201ENST00000556294 238 ntBASIC2.03□□□□□ -2.08
EBF4Q9BQW3 LINC00933-203ENST00000559812 219 ntBASIC2.03□□□□□ -2.08
EBF4Q9BQW3 AL138976.2-201ENST00000563989 694 ntBASIC2.03□□□□□ -2.08
EBF4Q9BQW3 AC010525.2-201ENST00000590920 195 ntBASIC2.03□□□□□ -2.08
EBF4Q9BQW3 AL670379.4-201ENST00000605279 254 ntBASIC2.03□□□□□ -2.08
EBF4Q9BQW3 MIR7106-201ENST00000612419 65 ntBASIC2.03□□□□□ -2.08
EBF4Q9BQW3 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.03□□□□□ -2.08
EBF4Q9BQW3 FER-210ENST00000628534 558 ntTSL 5 BASIC2.03□□□□□ -2.08
EBF4Q9BQW3 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.03□□□□□ -2.08
EBF4Q9BQW3 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.03□□□□□ -2.08
EBF4Q9BQW3 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
EBF4Q9BQW3 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
EBF4Q9BQW3 CASC19-280ENST00000642102 1351 ntBASIC2.02□□□□□ -2.09
EBF4Q9BQW3 AC080128.1-201ENST00000474389 1917 ntBASIC2.02□□□□□ -2.09
EBF4Q9BQW3 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.02□□□□□ -2.09
EBF4Q9BQW3 RNA5SP289-201ENST00000362332 137 ntBASIC2.02□□□□□ -2.09
EBF4Q9BQW3 RNY3P3-201ENST00000363816 102 ntBASIC2.02□□□□□ -2.09
EBF4Q9BQW3 RNU6-371P-201ENST00000364283 108 ntBASIC2.02□□□□□ -2.09
EBF4Q9BQW3 U3.12-201ENST00000364498 214 ntBASIC2.02□□□□□ -2.09
EBF4Q9BQW3 Y_RNA.255-201ENST00000364581 97 ntBASIC2.02□□□□□ -2.09
EBF4Q9BQW3 RNU6-384P-201ENST00000364900 104 ntBASIC2.02□□□□□ -2.09
EBF4Q9BQW3 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
EBF4Q9BQW3 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
EBF4Q9BQW3 U3.40-201ENST00000408706 208 ntBASIC2.02□□□□□ -2.09
EBF4Q9BQW3 RNA5SP111-201ENST00000411386 101 ntBASIC2.02□□□□□ -2.09
EBF4Q9BQW3 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.02□□□□□ -2.09
EBF4Q9BQW3 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.02□□□□□ -2.09
EBF4Q9BQW3 MTCO2P3-201ENST00000442543 421 ntBASIC2.02□□□□□ -2.09
EBF4Q9BQW3 RPS3AP12-201ENST00000443616 753 ntBASIC2.02□□□□□ -2.09
EBF4Q9BQW3 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.02□□□□□ -2.09
EBF4Q9BQW3 MTND1P18-201ENST00000448191 573 ntBASIC2.02□□□□□ -2.09
EBF4Q9BQW3 RNU7-63P-201ENST00000459054 62 ntBASIC2.02□□□□□ -2.09
EBF4Q9BQW3 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.02□□□□□ -2.09
EBF4Q9BQW3 GMFBP1-201ENST00000467831 427 ntBASIC2.02□□□□□ -2.09
EBF4Q9BQW3 AL163973.1-201ENST00000484753 577 ntBASIC2.02□□□□□ -2.09
EBF4Q9BQW3 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.02□□□□□ -2.09
EBF4Q9BQW3 CCDC34P1-201ENST00000507441 517 ntBASIC2.02□□□□□ -2.09
EBF4Q9BQW3 AC116655.1-201ENST00000508324 901 ntBASIC2.02□□□□□ -2.09
EBF4Q9BQW3 AC104806.1-201ENST00000508720 308 ntBASIC2.02□□□□□ -2.09
EBF4Q9BQW3 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 658.8 ms