Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 MTCYBP35-201ENST00000503630 1137 ntBASIC1.35□□□□□ -2.19
VAT1Q99536 SNORA43.2-201ENST00000516652 128 ntBASIC1.35□□□□□ -2.19
VAT1Q99536 COPS8P3-201ENST00000526024 482 ntBASIC1.35□□□□□ -2.19
VAT1Q99536 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.35□□□□□ -2.19
VAT1Q99536 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.35□□□□□ -2.19
VAT1Q99536 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.35□□□□□ -2.19
VAT1Q99536 AL354943.1-201ENST00000572103 781 ntBASIC1.35□□□□□ -2.19
VAT1Q99536 MIR3198-2-201ENST00000577868 80 ntBASIC1.35□□□□□ -2.19
VAT1Q99536 AL158032.1-201ENST00000605401 106 ntBASIC1.35□□□□□ -2.19
VAT1Q99536 AC099842.1-201ENST00000619919 596 ntBASIC1.35□□□□□ -2.19
VAT1Q99536 AL607023.1-201ENST00000620045 248 ntBASIC1.35□□□□□ -2.19
VAT1Q99536 AP002782.1-201ENST00000623107 614 ntBASIC1.35□□□□□ -2.19
VAT1Q99536 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.35□□□□□ -2.19
VAT1Q99536 MIR1248-201ENST00000629190 106 ntBASIC1.35□□□□□ -2.19
VAT1Q99536 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.35□□□□□ -2.19
VAT1Q99536 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
VAT1Q99536 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
VAT1Q99536 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.34□□□□□ -2.19
VAT1Q99536 RNU6-338P-201ENST00000383888 105 ntBASIC1.34□□□□□ -2.19
VAT1Q99536 MIR30A-201ENST00000385092 71 ntBASIC1.34□□□□□ -2.19
VAT1Q99536 SNORA48.1-201ENST00000390879 135 ntBASIC1.34□□□□□ -2.19
VAT1Q99536 RNA5SP100-201ENST00000410903 110 ntBASIC1.34□□□□□ -2.19
VAT1Q99536 RNA5SP59-201ENST00000410922 110 ntBASIC1.34□□□□□ -2.19
VAT1Q99536 AL031779.1-201ENST00000415663 330 ntBASIC1.34□□□□□ -2.19
VAT1Q99536 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.34□□□□□ -2.19
VAT1Q99536 MTCYBP5-201ENST00000423752 1135 ntBASIC1.34□□□□□ -2.19
VAT1Q99536 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.34□□□□□ -2.19
VAT1Q99536 MTND1P32-201ENST00000433043 938 ntBASIC1.34□□□□□ -2.19
VAT1Q99536 RPL22P17-201ENST00000438729 315 ntBASIC1.34□□□□□ -2.19
VAT1Q99536 AL357134.1-201ENST00000445848 426 ntBASIC1.34□□□□□ -2.19
VAT1Q99536 RNU1-123P-201ENST00000458950 160 ntBASIC1.34□□□□□ -2.19
VAT1Q99536 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.34□□□□□ -2.19
VAT1Q99536 MTCYBP40-201ENST00000509390 1135 ntBASIC1.34□□□□□ -2.19
VAT1Q99536 AC093259.1-201ENST00000509755 300 ntBASIC1.34□□□□□ -2.19
VAT1Q99536 RNVU1-2-201ENST00000516326 135 ntBASIC1.34□□□□□ -2.19
VAT1Q99536 RNU7-51P-201ENST00000516560 62 ntBASIC1.34□□□□□ -2.19
VAT1Q99536 RNU1-92P-201ENST00000517017 135 ntBASIC1.34□□□□□ -2.19
VAT1Q99536 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.34□□□□□ -2.19
VAT1Q99536 AL356057.1-201ENST00000533798 831 ntBASIC1.34□□□□□ -2.19
VAT1Q99536 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.34□□□□□ -2.19
VAT1Q99536 AP001004.1-201ENST00000582468 324 ntBASIC1.34□□□□□ -2.19
VAT1Q99536 MIR548AC-201ENST00000585049 88 ntBASIC1.34□□□□□ -2.19
VAT1Q99536 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.34□□□□□ -2.19
VAT1Q99536 AC063943.3-201ENST00000615562 356 ntBASIC1.34□□□□□ -2.19
VAT1Q99536 AL159153.1-201ENST00000619688 317 ntBASIC1.34□□□□□ -2.19
VAT1Q99536 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.34□□□□□ -2.19
VAT1Q99536 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.34□□□□□ -2.19
VAT1Q99536 SCARNA4-202ENST00000625402 129 ntBASIC1.34□□□□□ -2.19
VAT1Q99536 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
VAT1Q99536 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
VAT1Q99536 OR4G2P-201ENST00000328113 903 ntBASIC1.33□□□□□ -2.2
VAT1Q99536 Y_RNA.99-201ENST00000363138 105 ntBASIC1.33□□□□□ -2.2
VAT1Q99536 RNU6-809P-201ENST00000384461 107 ntBASIC1.33□□□□□ -2.2
VAT1Q99536 RNU6-906P-201ENST00000384700 70 ntBASIC1.33□□□□□ -2.2
VAT1Q99536 MIR578-201ENST00000384828 96 ntBASIC1.33□□□□□ -2.2
VAT1Q99536 RNA5SP213-201ENST00000391031 106 ntBASIC1.33□□□□□ -2.2
VAT1Q99536 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.33□□□□□ -2.2
VAT1Q99536 Y_RNA.597-201ENST00000410463 100 ntBASIC1.33□□□□□ -2.2
VAT1Q99536 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.33□□□□□ -2.2
VAT1Q99536 AC114491.1-201ENST00000416095 246 ntBASIC1.33□□□□□ -2.2
VAT1Q99536 AL365400.1-201ENST00000431854 640 ntBASIC1.33□□□□□ -2.2
VAT1Q99536 RPL37P21-201ENST00000435890 276 ntBASIC1.33□□□□□ -2.2
VAT1Q99536 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.33□□□□□ -2.2
VAT1Q99536 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.33□□□□□ -2.2
VAT1Q99536 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.33□□□□□ -2.2
VAT1Q99536 RPL30P12-201ENST00000474666 353 ntBASIC1.33□□□□□ -2.2
VAT1Q99536 WDR78-207ENST00000488333 613 ntTSL 3 BASIC1.33□□□□□ -2.2
VAT1Q99536 TPT1P8-201ENST00000510120 555 ntBASIC1.33□□□□□ -2.2
VAT1Q99536 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.33□□□□□ -2.2
VAT1Q99536 SNORA44.1-201ENST00000517031 108 ntBASIC1.33□□□□□ -2.2
VAT1Q99536 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.33□□□□□ -2.2
VAT1Q99536 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.33□□□□□ -2.2
VAT1Q99536 AC007792.1-201ENST00000623023 402 ntBASIC1.33□□□□□ -2.2
VAT1Q99536 OR4G3P-201ENST00000633500 913 ntBASIC1.33□□□□□ -2.2
VAT1Q99536 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
VAT1Q99536 ZNF680P1-201ENST00000436625 1469 ntBASIC1.32□□□□□ -2.2
VAT1Q99536 AC073343.1-201ENST00000328239 651 ntBASIC1.32□□□□□ -2.2
VAT1Q99536 RNU6-661P-201ENST00000362409 107 ntBASIC1.32□□□□□ -2.2
VAT1Q99536 SNORD56.1-201ENST00000362913 68 ntBASIC1.32□□□□□ -2.2
VAT1Q99536 SNORD56.2-201ENST00000363242 71 ntBASIC1.32□□□□□ -2.2
VAT1Q99536 RNU6-1179P-201ENST00000384667 107 ntBASIC1.32□□□□□ -2.2
VAT1Q99536 SNORA17.3-201ENST00000391159 129 ntBASIC1.32□□□□□ -2.2
VAT1Q99536 RPS3AP36-201ENST00000398190 775 ntBASIC1.32□□□□□ -2.2
VAT1Q99536 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC1.32□□□□□ -2.2
VAT1Q99536 RPS15AP10-201ENST00000432472 382 ntBASIC1.32□□□□□ -2.2
VAT1Q99536 AL121601.2-201ENST00000438019 707 ntBASIC1.32□□□□□ -2.2
VAT1Q99536 HSPE1P24-201ENST00000450782 238 ntBASIC1.32□□□□□ -2.2
VAT1Q99536 RPL30P1-201ENST00000488676 339 ntBASIC1.32□□□□□ -2.2
VAT1Q99536 AC091951.3-201ENST00000504093 246 ntBASIC1.32□□□□□ -2.2
VAT1Q99536 FAM206BP-201ENST00000510179 541 ntBASIC1.32□□□□□ -2.2
VAT1Q99536 RNU6-123P-201ENST00000516163 102 ntBASIC1.32□□□□□ -2.2
VAT1Q99536 RNA5SP337-201ENST00000517007 109 ntBASIC1.32□□□□□ -2.2
VAT1Q99536 AP003033.1-201ENST00000527244 415 ntBASIC1.32□□□□□ -2.2
VAT1Q99536 ADI1P3-201ENST00000549509 470 ntBASIC1.32□□□□□ -2.2
VAT1Q99536 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.32□□□□□ -2.2
VAT1Q99536 ZNF519P3-201ENST00000557158 1032 ntBASIC1.32□□□□□ -2.2
VAT1Q99536 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.32□□□□□ -2.2
VAT1Q99536 AC068338.1-201ENST00000565567 176 ntBASIC1.32□□□□□ -2.2
VAT1Q99536 MIR4421-201ENST00000578133 69 ntBASIC1.32□□□□□ -2.2
VAT1Q99536 MIR3660-201ENST00000584845 100 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 542.5 ms