Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AL365434.2-201ENST00000607979 234 ntBASIC0.54□□□□□ -2.32
AP1S3Q96PC3 AC084824.5-201ENST00000612009 413 ntBASIC0.54□□□□□ -2.32
AP1S3Q96PC3 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
AP1S3Q96PC3 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.54□□□□□ -2.32
AP1S3Q96PC3 RNU6-354P-201ENST00000383862 107 ntBASIC0.53□□□□□ -2.32
AP1S3Q96PC3 RNU6-207P-201ENST00000384137 107 ntBASIC0.53□□□□□ -2.32
AP1S3Q96PC3 RNU6-610P-201ENST00000384264 107 ntBASIC0.53□□□□□ -2.32
AP1S3Q96PC3 Y_RNA.534-201ENST00000384599 112 ntBASIC0.53□□□□□ -2.32
AP1S3Q96PC3 MIR608-201ENST00000384820 100 ntBASIC0.53□□□□□ -2.32
AP1S3Q96PC3 AL355994.1-201ENST00000424379 260 ntBASIC0.53□□□□□ -2.32
AP1S3Q96PC3 TIMM9P1-201ENST00000436122 256 ntBASIC0.53□□□□□ -2.32
AP1S3Q96PC3 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.53□□□□□ -2.32
AP1S3Q96PC3 RNU1-131P-201ENST00000458943 161 ntBASIC0.53□□□□□ -2.32
AP1S3Q96PC3 snoU109.2-201ENST00000459316 135 ntBASIC0.53□□□□□ -2.32
AP1S3Q96PC3 snoU13.14-201ENST00000459372 104 ntBASIC0.53□□□□□ -2.32
AP1S3Q96PC3 HMGN2P9-201ENST00000476875 229 ntBASIC0.53□□□□□ -2.32
AP1S3Q96PC3 AC134050.1-201ENST00000495088 933 ntBASIC0.53□□□□□ -2.32
AP1S3Q96PC3 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.53□□□□□ -2.32
AP1S3Q96PC3 RNU6-322P-201ENST00000516010 103 ntBASIC0.53□□□□□ -2.32
AP1S3Q96PC3 MIR449C-201ENST00000516047 92 ntBASIC0.53□□□□□ -2.32
AP1S3Q96PC3 SNORA31.16-201ENST00000516773 139 ntBASIC0.53□□□□□ -2.32
AP1S3Q96PC3 RN7SKP88-201ENST00000516847 250 ntBASIC0.53□□□□□ -2.32
AP1S3Q96PC3 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.53□□□□□ -2.32
AP1S3Q96PC3 AC137800.2-201ENST00000574375 120 ntBASIC0.53□□□□□ -2.32
AP1S3Q96PC3 MIR4698-201ENST00000577795 80 ntBASIC0.53□□□□□ -2.32
AP1S3Q96PC3 MIR3664-201ENST00000579074 99 ntBASIC0.53□□□□□ -2.32
AP1S3Q96PC3 BNIP3P9-201ENST00000603714 553 ntBASIC0.53□□□□□ -2.32
AP1S3Q96PC3 7SK.8-201ENST00000612110 250 ntBASIC0.53□□□□□ -2.32
AP1S3Q96PC3 7SK.11-201ENST00000615477 250 ntBASIC0.53□□□□□ -2.32
AP1S3Q96PC3 7SK.13-201ENST00000622040 250 ntBASIC0.53□□□□□ -2.32
AP1S3Q96PC3 AP000676.3-201ENST00000623299 569 ntBASIC0.53□□□□□ -2.32
AP1S3Q96PC3 AC092656.1-203ENST00000624134 423 ntBASIC0.53□□□□□ -2.32
AP1S3Q96PC3 AC231657.1-201ENST00000624313 397 ntBASIC0.53□□□□□ -2.32
AP1S3Q96PC3 LINC02555-201ENST00000563933 1951 ntBASIC0.53□□□□□ -2.32
AP1S3Q96PC3 MTND5P33-201ENST00000571250 1450 ntBASIC0.53□□□□□ -2.33
AP1S3Q96PC3 AL079343.1-201ENST00000572358 1771 ntBASIC0.52□□□□□ -2.33
AP1S3Q96PC3 Y_RNA.327-201ENST00000365201 102 ntBASIC0.52□□□□□ -2.33
AP1S3Q96PC3 RNU6-487P-201ENST00000365430 104 ntBASIC0.52□□□□□ -2.33
AP1S3Q96PC3 MIR29B2-201ENST00000385055 81 ntBASIC0.52□□□□□ -2.33
AP1S3Q96PC3 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC0.52□□□□□ -2.33
AP1S3Q96PC3 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.52□□□□□ -2.33
AP1S3Q96PC3 RNU2-23P-201ENST00000410545 195 ntBASIC0.52□□□□□ -2.33
AP1S3Q96PC3 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.52□□□□□ -2.33
AP1S3Q96PC3 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.52□□□□□ -2.33
AP1S3Q96PC3 RPS15AP12-201ENST00000419498 388 ntBASIC0.52□□□□□ -2.33
AP1S3Q96PC3 SNX2P2-201ENST00000424553 323 ntBASIC0.52□□□□□ -2.33
AP1S3Q96PC3 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.52□□□□□ -2.33
AP1S3Q96PC3 RPS15AP10-201ENST00000432472 382 ntBASIC0.52□□□□□ -2.33
AP1S3Q96PC3 AC099677.2-201ENST00000436385 175 ntBASIC0.52□□□□□ -2.33
AP1S3Q96PC3 MTND1P30-201ENST00000441241 901 ntBASIC0.52□□□□□ -2.33
AP1S3Q96PC3 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC0.52□□□□□ -2.33
AP1S3Q96PC3 RPS27AP8-201ENST00000452665 445 ntBASIC0.52□□□□□ -2.33
AP1S3Q96PC3 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.52□□□□□ -2.33
AP1S3Q96PC3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.52□□□□□ -2.33
AP1S3Q96PC3 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.52□□□□□ -2.33
AP1S3Q96PC3 AC091163.3-201ENST00000518269 1144 ntBASIC0.52□□□□□ -2.33
AP1S3Q96PC3 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.52□□□□□ -2.33
AP1S3Q96PC3 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.52□□□□□ -2.33
AP1S3Q96PC3 HMGB1P33-201ENST00000563485 527 ntBASIC0.52□□□□□ -2.33
AP1S3Q96PC3 AC092325.1-201ENST00000566449 554 ntBASIC0.52□□□□□ -2.33
AP1S3Q96PC3 VN1R107P-201ENST00000601784 209 ntBASIC0.52□□□□□ -2.33
AP1S3Q96PC3 AC090578.1-201ENST00000604955 591 ntBASIC0.52□□□□□ -2.33
AP1S3Q96PC3 AL451064.1-201ENST00000607718 471 ntBASIC0.52□□□□□ -2.33
AP1S3Q96PC3 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC0.52□□□□□ -2.33
AP1S3Q96PC3 AL355816.2-201ENST00000610049 647 ntBASIC0.52□□□□□ -2.33
AP1S3Q96PC3 AC130324.3-201ENST00000614165 542 ntBASIC0.52□□□□□ -2.33
AP1S3Q96PC3 AC023158.2-201ENST00000614876 543 ntBASIC0.52□□□□□ -2.33
AP1S3Q96PC3 AC068647.2-201ENST00000637380 353 ntBASIC0.52□□□□□ -2.33
AP1S3Q96PC3 MIR3529-201ENST00000637713 78 ntBASIC0.52□□□□□ -2.33
AP1S3Q96PC3 RNU6-1080P-201ENST00000383982 107 ntBASIC0.51□□□□□ -2.33
AP1S3Q96PC3 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.51□□□□□ -2.33
AP1S3Q96PC3 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.51□□□□□ -2.33
AP1S3Q96PC3 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.51□□□□□ -2.33
AP1S3Q96PC3 MTND4P25-201ENST00000441039 533 ntBASIC0.51□□□□□ -2.33
AP1S3Q96PC3 MTND2P3-201ENST00000452458 470 ntBASIC0.51□□□□□ -2.33
AP1S3Q96PC3 MTND2P30-201ENST00000456663 382 ntBASIC0.51□□□□□ -2.33
AP1S3Q96PC3 AC104563.1-201ENST00000476147 376 ntBASIC0.51□□□□□ -2.33
AP1S3Q96PC3 ARL2BPP4-201ENST00000506854 471 ntBASIC0.51□□□□□ -2.33
AP1S3Q96PC3 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
AP1S3Q96PC3 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.51□□□□□ -2.33
AP1S3Q96PC3 DEFB131D-201ENST00000526803 184 ntBASIC0.51□□□□□ -2.33
AP1S3Q96PC3 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
AP1S3Q96PC3 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.51□□□□□ -2.33
AP1S3Q96PC3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.51□□□□□ -2.33
AP1S3Q96PC3 AC098483.2-201ENST00000603158 454 ntBASIC0.51□□□□□ -2.33
AP1S3Q96PC3 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.51□□□□□ -2.33
AP1S3Q96PC3 AC105129.3-201ENST00000605455 485 ntBASIC0.51□□□□□ -2.33
AP1S3Q96PC3 AL589994.2-201ENST00000621124 579 ntBASIC0.51□□□□□ -2.33
AP1S3Q96PC3 AL512643.1-201ENST00000635735 524 ntBASIC0.51□□□□□ -2.33
AP1S3Q96PC3 AC233981.2-201ENST00000611524 1614 ntBASIC0.5□□□□□ -2.33
AP1S3Q96PC3 Y_RNA.140-201ENST00000363474 103 ntBASIC0.5□□□□□ -2.33
AP1S3Q96PC3 Y_RNA.332-201ENST00000365271 113 ntBASIC0.5□□□□□ -2.33
AP1S3Q96PC3 RNU6-53P-201ENST00000365367 106 ntBASIC0.5□□□□□ -2.33
AP1S3Q96PC3 RNU6-331P-201ENST00000384724 107 ntBASIC0.5□□□□□ -2.33
AP1S3Q96PC3 MIR520A-201ENST00000384862 85 ntBASIC0.5□□□□□ -2.33
AP1S3Q96PC3 MIR605-201ENST00000385078 83 ntBASIC0.5□□□□□ -2.33
AP1S3Q96PC3 MIR92A1-201ENST00000385233 78 ntBASIC0.5□□□□□ -2.33
AP1S3Q96PC3 RNU6-1025P-201ENST00000410629 104 ntBASIC0.5□□□□□ -2.33
AP1S3Q96PC3 AC010099.3-201ENST00000423896 409 ntBASIC0.5□□□□□ -2.33
AP1S3Q96PC3 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms