Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.25□□□□□ -2.05
VMP1Q96GC9 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.25□□□□□ -2.05
VMP1Q96GC9 AL158823.1-201ENST00000418441 478 ntBASIC2.25□□□□□ -2.05
VMP1Q96GC9 PIGFP2-201ENST00000421400 651 ntBASIC2.25□□□□□ -2.05
VMP1Q96GC9 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.25□□□□□ -2.05
VMP1Q96GC9 RPL23AP6-201ENST00000446637 472 ntBASIC2.25□□□□□ -2.05
VMP1Q96GC9 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.25□□□□□ -2.05
VMP1Q96GC9 RN7SL636P-201ENST00000497504 294 ntBASIC2.25□□□□□ -2.05
VMP1Q96GC9 PTP4A1P4-201ENST00000512479 322 ntBASIC2.25□□□□□ -2.05
VMP1Q96GC9 RNU6-377P-201ENST00000515965 102 ntBASIC2.25□□□□□ -2.05
VMP1Q96GC9 RNU6-965P-201ENST00000516721 96 ntBASIC2.25□□□□□ -2.05
VMP1Q96GC9 AC021269.2-201ENST00000532318 330 ntBASIC2.25□□□□□ -2.05
VMP1Q96GC9 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.25□□□□□ -2.05
VMP1Q96GC9 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.25□□□□□ -2.05
VMP1Q96GC9 Z94722.1-201ENST00000604328 474 ntBASIC2.25□□□□□ -2.05
VMP1Q96GC9 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.25□□□□□ -2.05
VMP1Q96GC9 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
VMP1Q96GC9 AL773524.1-201ENST00000614065 229 ntBASIC2.25□□□□□ -2.05
VMP1Q96GC9 AC063943.3-201ENST00000615562 356 ntBASIC2.25□□□□□ -2.05
VMP1Q96GC9 MIR1291-201ENST00000627649 87 ntBASIC2.25□□□□□ -2.05
VMP1Q96GC9 AC016717.2-201ENST00000609089 5141 ntBASIC2.25□□□□□ -2.05
VMP1Q96GC9 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
VMP1Q96GC9 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.24□□□□□ -2.05
VMP1Q96GC9 RNU6-37P-201ENST00000362692 107 ntBASIC2.24□□□□□ -2.05
VMP1Q96GC9 U3.4-201ENST00000363352 213 ntBASIC2.24□□□□□ -2.05
VMP1Q96GC9 Y_RNA.201-201ENST00000364052 96 ntBASIC2.24□□□□□ -2.05
VMP1Q96GC9 RNU6-11P-201ENST00000364234 107 ntBASIC2.24□□□□□ -2.05
VMP1Q96GC9 SNORD114-30-201ENST00000364448 72 ntBASIC2.24□□□□□ -2.05
VMP1Q96GC9 RNU4-48P-201ENST00000365559 182 ntBASIC2.24□□□□□ -2.05
VMP1Q96GC9 RNU6-25P-201ENST00000383873 107 ntBASIC2.24□□□□□ -2.05
VMP1Q96GC9 RNU6-1-201ENST00000383898 107 ntBASIC2.24□□□□□ -2.05
VMP1Q96GC9 RNU6-48P-201ENST00000384161 107 ntBASIC2.24□□□□□ -2.05
VMP1Q96GC9 RNU6-36P-201ENST00000384172 107 ntBASIC2.24□□□□□ -2.05
VMP1Q96GC9 RNU6-4P-201ENST00000384205 107 ntBASIC2.24□□□□□ -2.05
VMP1Q96GC9 RNU6-5P-201ENST00000384238 107 ntBASIC2.24□□□□□ -2.05
VMP1Q96GC9 RNU6-3P-201ENST00000384314 107 ntBASIC2.24□□□□□ -2.05
VMP1Q96GC9 RNU6-16P-201ENST00000384385 107 ntBASIC2.24□□□□□ -2.05
VMP1Q96GC9 RNU6-15P-201ENST00000384534 107 ntBASIC2.24□□□□□ -2.05
VMP1Q96GC9 RNU6-2-201ENST00000384627 107 ntBASIC2.24□□□□□ -2.05
VMP1Q96GC9 RNU6-29P-201ENST00000384637 107 ntBASIC2.24□□□□□ -2.05
VMP1Q96GC9 RNU6-9-201ENST00000384776 107 ntBASIC2.24□□□□□ -2.05
VMP1Q96GC9 RNU6-33P-201ENST00000384793 107 ntBASIC2.24□□□□□ -2.05
VMP1Q96GC9 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.24□□□□□ -2.05
VMP1Q96GC9 MIR1262-201ENST00000408276 93 ntBASIC2.24□□□□□ -2.05
VMP1Q96GC9 Y_RNA.597-201ENST00000410463 100 ntBASIC2.24□□□□□ -2.05
VMP1Q96GC9 RNU6-248P-201ENST00000410720 107 ntBASIC2.24□□□□□ -2.05
VMP1Q96GC9 SRIP3-201ENST00000413200 219 ntBASIC2.24□□□□□ -2.05
VMP1Q96GC9 AL669831.1-202ENST00000428504 417 ntBASIC2.24□□□□□ -2.05
VMP1Q96GC9 CBX3P6-201ENST00000430257 527 ntBASIC2.24□□□□□ -2.05
VMP1Q96GC9 RPS6P15-201ENST00000431996 751 ntBASIC2.24□□□□□ -2.05
VMP1Q96GC9 RPS15AP10-201ENST00000432472 382 ntBASIC2.24□□□□□ -2.05
VMP1Q96GC9 AC098826.1-201ENST00000433943 471 ntBASIC2.24□□□□□ -2.05
VMP1Q96GC9 GTF2IP13-201ENST00000438487 386 ntBASIC2.24□□□□□ -2.05
VMP1Q96GC9 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.24□□□□□ -2.05
VMP1Q96GC9 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.24□□□□□ -2.05
VMP1Q96GC9 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.24□□□□□ -2.05
VMP1Q96GC9 RPS29P15-201ENST00000458329 171 ntBASIC2.24□□□□□ -2.05
VMP1Q96GC9 LRRC34P2-201ENST00000514850 553 ntBASIC2.24□□□□□ -2.05
VMP1Q96GC9 AC115990.1-201ENST00000526957 301 ntBASIC2.24□□□□□ -2.05
VMP1Q96GC9 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.24□□□□□ -2.05
VMP1Q96GC9 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.24□□□□□ -2.05
VMP1Q96GC9 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.24□□□□□ -2.05
VMP1Q96GC9 MIR4299-201ENST00000577899 72 ntBASIC2.24□□□□□ -2.05
VMP1Q96GC9 MIR4448-201ENST00000584360 86 ntBASIC2.24□□□□□ -2.05
VMP1Q96GC9 AC002984.1-201ENST00000591692 448 ntBASIC2.24□□□□□ -2.05
VMP1Q96GC9 NIFKP6-201ENST00000598115 845 ntBASIC2.24□□□□□ -2.05
VMP1Q96GC9 AL590229.1-201ENST00000603497 542 ntBASIC2.24□□□□□ -2.05
VMP1Q96GC9 RNU6-6P-201ENST00000606623 107 ntBASIC2.24□□□□□ -2.05
VMP1Q96GC9 AC063944.3-201ENST00000609969 533 ntBASIC2.24□□□□□ -2.05
VMP1Q96GC9 AC091834.1-201ENST00000614543 472 ntBASIC2.24□□□□□ -2.05
VMP1Q96GC9 AC097372.5-201ENST00000623665 376 ntBASIC2.24□□□□□ -2.05
VMP1Q96GC9 MIR21-201ENST00000362134 72 ntBASIC2.23□□□□□ -2.05
VMP1Q96GC9 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
VMP1Q96GC9 MIR676-201ENST00000390702 67 ntBASIC2.23□□□□□ -2.05
VMP1Q96GC9 AL049545.1-201ENST00000401856 572 ntBASIC2.23□□□□□ -2.05
VMP1Q96GC9 RNA5SP508-201ENST00000411327 119 ntBASIC2.23□□□□□ -2.05
VMP1Q96GC9 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.23□□□□□ -2.05
VMP1Q96GC9 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.23□□□□□ -2.05
VMP1Q96GC9 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
VMP1Q96GC9 AC133104.1-201ENST00000429100 218 ntBASIC2.23□□□□□ -2.05
VMP1Q96GC9 MTND1P18-201ENST00000448191 573 ntBASIC2.23□□□□□ -2.05
VMP1Q96GC9 FDX1P2-201ENST00000450769 375 ntBASIC2.23□□□□□ -2.05
VMP1Q96GC9 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.23□□□□□ -2.05
VMP1Q96GC9 MTND3P7-201ENST00000474435 343 ntBASIC2.23□□□□□ -2.05
VMP1Q96GC9 MTCO3P7-201ENST00000510008 774 ntBASIC2.23□□□□□ -2.05
VMP1Q96GC9 MTCO3P28-201ENST00000513351 515 ntBASIC2.23□□□□□ -2.05
VMP1Q96GC9 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.23□□□□□ -2.05
VMP1Q96GC9 AL512310.1-201ENST00000548639 172 ntBASIC2.23□□□□□ -2.05
VMP1Q96GC9 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.23□□□□□ -2.05
VMP1Q96GC9 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.23□□□□□ -2.05
VMP1Q96GC9 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.23□□□□□ -2.05
VMP1Q96GC9 AC103810.6-201ENST00000606708 136 ntBASIC2.23□□□□□ -2.05
VMP1Q96GC9 AC009487.4-201ENST00000624969 3585 ntBASIC2.23□□□□□ -2.05
VMP1Q96GC9 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
VMP1Q96GC9 RNU6-105P-201ENST00000363909 104 ntBASIC2.22□□□□□ -2.05
VMP1Q96GC9 RNU6-743P-201ENST00000364151 106 ntBASIC2.22□□□□□ -2.05
VMP1Q96GC9 RNU6-282P-201ENST00000365357 103 ntBASIC2.22□□□□□ -2.05
VMP1Q96GC9 SNORD14D-201ENST00000384390 87 ntBASIC2.22□□□□□ -2.05
VMP1Q96GC9 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
VMP1Q96GC9 RNA5SP465-201ENST00000391195 109 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms