Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 CYCSP19-201ENST00000411715 316 ntBASIC4.88□□□□□ -1.63
HLA-CQ95604 HSPE1P12-201ENST00000412576 301 ntBASIC4.88□□□□□ -1.63
HLA-CQ95604 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.88□□□□□ -1.63
HLA-CQ95604 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC4.88□□□□□ -1.63
HLA-CQ95604 Z75741.1-201ENST00000446793 314 ntBASIC4.88□□□□□ -1.63
HLA-CQ95604 RPS17P2-201ENST00000461663 408 ntBASIC4.88□□□□□ -1.63
HLA-CQ95604 RNU6-453P-201ENST00000516819 85 ntBASIC4.88□□□□□ -1.63
HLA-CQ95604 RNA5SP170-201ENST00000517150 101 ntBASIC4.88□□□□□ -1.63
HLA-CQ95604 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC4.88□□□□□ -1.63
HLA-CQ95604 MIR4286-201ENST00000580651 93 ntBASIC4.88□□□□□ -1.63
HLA-CQ95604 AC005255.1-201ENST00000593748 216 ntBASIC4.88□□□□□ -1.63
HLA-CQ95604 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-CQ95604 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
HLA-CQ95604 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
HLA-CQ95604 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
HLA-CQ95604 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.88□□□□□ -1.63
HLA-CQ95604 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-CQ95604 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
HLA-CQ95604 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-CQ95604 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-CQ95604 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-CQ95604 ZFRP1-201ENST00000457579 2970 ntBASIC4.88□□□□□ -1.63
HLA-CQ95604 MFSD8-242ENST00000641690 4199 ntBASIC4.88□□□□□ -1.63
HLA-CQ95604 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-CQ95604 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-CQ95604 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.88□□□□□ -1.63
HLA-CQ95604 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HLA-CQ95604 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.87□□□□□ -1.63
HLA-CQ95604 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-CQ95604 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-CQ95604 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.87□□□□□ -1.63
HLA-CQ95604 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
HLA-CQ95604 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
HLA-CQ95604 AC021146.4-201ENST00000309229 279 ntBASIC4.87□□□□□ -1.63
HLA-CQ95604 MIR383-201ENST00000362257 73 ntBASIC4.87□□□□□ -1.63
HLA-CQ95604 RNU4-10P-201ENST00000364383 140 ntBASIC4.87□□□□□ -1.63
HLA-CQ95604 Y_RNA.393-201ENST00000383936 102 ntBASIC4.87□□□□□ -1.63
HLA-CQ95604 MIR200C-201ENST00000384980 68 ntBASIC4.87□□□□□ -1.63
HLA-CQ95604 MIR607-201ENST00000385241 96 ntBASIC4.87□□□□□ -1.63
HLA-CQ95604 SNORA75.5-201ENST00000391291 81 ntBASIC4.87□□□□□ -1.63
HLA-CQ95604 AL365496.1-201ENST00000426885 215 ntBASIC4.87□□□□□ -1.63
HLA-CQ95604 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-CQ95604 HSPE1P13-201ENST00000451143 297 ntBASIC4.87□□□□□ -1.63
HLA-CQ95604 EEF1B2P7-201ENST00000451177 676 ntBASIC4.87□□□□□ -1.63
HLA-CQ95604 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.87□□□□□ -1.63
HLA-CQ95604 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-CQ95604 AC084357.1-201ENST00000473404 255 ntBASIC4.87□□□□□ -1.63
HLA-CQ95604 AC108022.1-201ENST00000493466 478 ntBASIC4.87□□□□□ -1.63
HLA-CQ95604 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-CQ95604 SNORA70.12-201ENST00000516084 153 ntBASIC4.87□□□□□ -1.63
HLA-CQ95604 RNU6-581P-201ENST00000516214 105 ntBASIC4.87□□□□□ -1.63
HLA-CQ95604 AC011602.1-201ENST00000546484 331 ntBASIC4.87□□□□□ -1.63
HLA-CQ95604 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.87□□□□□ -1.63
HLA-CQ95604 MIR4679-2-201ENST00000578358 77 ntBASIC4.87□□□□□ -1.63
HLA-CQ95604 TCL6_2.1-201ENST00000615162 119 ntBASIC4.87□□□□□ -1.63
HLA-CQ95604 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.87□□□□□ -1.63
HLA-CQ95604 AC015914.2-201ENST00000618167 288 ntBASIC4.87□□□□□ -1.63
HLA-CQ95604 AC112484.5-201ENST00000624189 228 ntBASIC4.87□□□□□ -1.63
HLA-CQ95604 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
HLA-CQ95604 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.87□□□□□ -1.63
HLA-CQ95604 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
HLA-CQ95604 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
HLA-CQ95604 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.87□□□□□ -1.63
HLA-CQ95604 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-CQ95604 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-CQ95604 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HLA-CQ95604 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-CQ95604 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-CQ95604 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.86□□□□□ -1.63
HLA-CQ95604 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.86□□□□□ -1.63
HLA-CQ95604 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
HLA-CQ95604 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
HLA-CQ95604 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.86□□□□□ -1.63
HLA-CQ95604 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-CQ95604 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HLA-CQ95604 AC068700.1-201ENST00000565862 3754 ntBASIC4.86□□□□□ -1.63
HLA-CQ95604 MIR372-201ENST00000362225 67 ntBASIC4.86□□□□□ -1.63
HLA-CQ95604 RNU6-1048P-201ENST00000364054 107 ntBASIC4.86□□□□□ -1.63
HLA-CQ95604 RNU6-270P-201ENST00000364131 105 ntBASIC4.86□□□□□ -1.63
HLA-CQ95604 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.86□□□□□ -1.63
HLA-CQ95604 Y_RNA.310-201ENST00000365063 113 ntBASIC4.86□□□□□ -1.63
HLA-CQ95604 Y_RNA.341-201ENST00000365341 102 ntBASIC4.86□□□□□ -1.63
HLA-CQ95604 AP002088.1-201ENST00000382740 395 ntBASIC4.86□□□□□ -1.63
HLA-CQ95604 RNU6-429P-201ENST00000384582 108 ntBASIC4.86□□□□□ -1.63
HLA-CQ95604 RNU6-855P-201ENST00000410395 104 ntBASIC4.86□□□□□ -1.63
HLA-CQ95604 RNA5SP468-201ENST00000516782 93 ntBASIC4.86□□□□□ -1.63
HLA-CQ95604 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.86□□□□□ -1.63
HLA-CQ95604 RPL23AP53-201ENST00000521854 457 ntBASIC4.86□□□□□ -1.63
HLA-CQ95604 AC006199.1-201ENST00000548728 219 ntBASIC4.86□□□□□ -1.63
HLA-CQ95604 AC105137.2-201ENST00000569073 466 ntBASIC4.86□□□□□ -1.63
HLA-CQ95604 MIR4724-201ENST00000579485 89 ntBASIC4.86□□□□□ -1.63
HLA-CQ95604 AL034555.1-201ENST00000604816 211 ntBASIC4.86□□□□□ -1.63
HLA-CQ95604 RNU6-91P-201ENST00000607774 107 ntBASIC4.86□□□□□ -1.63
HLA-CQ95604 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.86□□□□□ -1.63
HLA-CQ95604 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.86□□□□□ -1.63
HLA-CQ95604 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.86□□□□□ -1.63
HLA-CQ95604 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC4.86□□□□□ -1.63
HLA-CQ95604 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-CQ95604 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HLA-CQ95604 AC125257.1-201ENST00000560400 2930 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms