Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 AC009646.1-201ENST00000510455 318 ntBASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 Y_RNA.693-201ENST00000516641 110 ntBASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 RNU6-835P-201ENST00000516974 104 ntBASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 AC109329.1-201ENST00000518744 317 ntBASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 AC022880.1-201ENST00000534017 973 ntBASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 MIR5002-201ENST00000584713 97 ntBASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 RNU6-6P-201ENST00000606623 107 ntBASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 AC092954.2-201ENST00000609103 430 ntBASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 U2.17-201ENST00000611454 95 ntBASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
CCDC197Q8NCU1 ZNF658B-202ENST00000615961 3375 ntBASIC2.19□□□□□ -2.06
CCDC197Q8NCU1 Y_RNA.126-201ENST00000363382 111 ntBASIC2.19□□□□□ -2.06
CCDC197Q8NCU1 RNA5SP160-201ENST00000364866 120 ntBASIC2.19□□□□□ -2.06
CCDC197Q8NCU1 RNU1-57P-201ENST00000384491 166 ntBASIC2.19□□□□□ -2.06
CCDC197Q8NCU1 RNU6-780P-201ENST00000391030 104 ntBASIC2.19□□□□□ -2.06
CCDC197Q8NCU1 SNORD56-201ENST00000413522 71 ntBASIC2.19□□□□□ -2.06
CCDC197Q8NCU1 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.19□□□□□ -2.06
CCDC197Q8NCU1 CYCSP48-201ENST00000417124 323 ntBASIC2.19□□□□□ -2.06
CCDC197Q8NCU1 AC008267.5-201ENST00000424928 265 ntBASIC2.19□□□□□ -2.06
CCDC197Q8NCU1 TIMM9P3-201ENST00000428659 274 ntBASIC2.19□□□□□ -2.06
CCDC197Q8NCU1 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC197Q8NCU1 AC090515.1-201ENST00000465295 476 ntBASIC2.19□□□□□ -2.06
CCDC197Q8NCU1 MTND4P7-201ENST00000523876 130 ntBASIC2.19□□□□□ -2.06
CCDC197Q8NCU1 AC022080.3-201ENST00000544433 482 ntBASIC2.19□□□□□ -2.06
CCDC197Q8NCU1 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.19□□□□□ -2.06
CCDC197Q8NCU1 AC245505.1-201ENST00000556398 224 ntBASIC2.19□□□□□ -2.06
CCDC197Q8NCU1 MIR3941-201ENST00000582572 103 ntBASIC2.19□□□□□ -2.06
CCDC197Q8NCU1 AC002984.1-201ENST00000591692 448 ntBASIC2.19□□□□□ -2.06
CCDC197Q8NCU1 AC073410.2-201ENST00000603240 332 ntBASIC2.19□□□□□ -2.06
CCDC197Q8NCU1 AL713866.2-201ENST00000603579 219 ntBASIC2.19□□□□□ -2.06
CCDC197Q8NCU1 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.19□□□□□ -2.06
CCDC197Q8NCU1 AC099654.12-201ENST00000639868 649 ntBASIC2.19□□□□□ -2.06
CCDC197Q8NCU1 SNORD56.1-201ENST00000362913 68 ntBASIC2.18□□□□□ -2.06
CCDC197Q8NCU1 RNU6-105P-201ENST00000363909 104 ntBASIC2.18□□□□□ -2.06
CCDC197Q8NCU1 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
CCDC197Q8NCU1 AL356967.1-201ENST00000406305 431 ntBASIC2.18□□□□□ -2.06
CCDC197Q8NCU1 RNU6-648P-201ENST00000410190 107 ntBASIC2.18□□□□□ -2.06
CCDC197Q8NCU1 RNA5SP390-201ENST00000410191 113 ntBASIC2.18□□□□□ -2.06
CCDC197Q8NCU1 RNU2-23P-201ENST00000410545 195 ntBASIC2.18□□□□□ -2.06
CCDC197Q8NCU1 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.18□□□□□ -2.06
CCDC197Q8NCU1 AC138623.1-201ENST00000418060 216 ntBASIC2.18□□□□□ -2.06
CCDC197Q8NCU1 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC197Q8NCU1 AC007969.2-201ENST00000441891 191 ntBASIC2.18□□□□□ -2.06
CCDC197Q8NCU1 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC197Q8NCU1 AC087884.1-201ENST00000469738 328 ntBASIC2.18□□□□□ -2.06
CCDC197Q8NCU1 AC079140.5-201ENST00000507882 310 ntBASIC2.18□□□□□ -2.06
CCDC197Q8NCU1 AF213884.2-201ENST00000510417 903 ntBASIC2.18□□□□□ -2.06
CCDC197Q8NCU1 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.18□□□□□ -2.06
CCDC197Q8NCU1 AC027176.1-201ENST00000560204 514 ntBASIC2.18□□□□□ -2.06
CCDC197Q8NCU1 AL138976.2-201ENST00000563989 694 ntBASIC2.18□□□□□ -2.06
CCDC197Q8NCU1 MIR5007-201ENST00000583098 95 ntBASIC2.18□□□□□ -2.06
CCDC197Q8NCU1 MIR3935-201ENST00000583472 104 ntBASIC2.18□□□□□ -2.06
CCDC197Q8NCU1 AC103810.6-201ENST00000606708 136 ntBASIC2.18□□□□□ -2.06
CCDC197Q8NCU1 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.18□□□□□ -2.06
CCDC197Q8NCU1 uc_338.20-201ENST00000621563 178 ntBASIC2.18□□□□□ -2.06
CCDC197Q8NCU1 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC197Q8NCU1 AL596028.1-201ENST00000326971 197 ntBASIC2.17□□□□□ -2.06
CCDC197Q8NCU1 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.17□□□□□ -2.06
CCDC197Q8NCU1 Y_RNA.40-201ENST00000362645 93 ntBASIC2.17□□□□□ -2.06
CCDC197Q8NCU1 RNU4-20P-201ENST00000365601 151 ntBASIC2.17□□□□□ -2.06
CCDC197Q8NCU1 RNVU1-14-201ENST00000384770 164 ntBASIC2.17□□□□□ -2.06
CCDC197Q8NCU1 MIR186-201ENST00000384988 86 ntBASIC2.17□□□□□ -2.06
CCDC197Q8NCU1 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC197Q8NCU1 AC018634.1-201ENST00000437554 401 ntBASIC2.17□□□□□ -2.06
CCDC197Q8NCU1 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC197Q8NCU1 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.17□□□□□ -2.06
CCDC197Q8NCU1 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC197Q8NCU1 AC013470.1-201ENST00000453438 462 ntBASIC2.17□□□□□ -2.06
CCDC197Q8NCU1 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC2.17□□□□□ -2.06
CCDC197Q8NCU1 MTCO3P38-201ENST00000468910 766 ntBASIC2.17□□□□□ -2.06
CCDC197Q8NCU1 AC140059.1-201ENST00000489238 361 ntBASIC2.17□□□□□ -2.06
CCDC197Q8NCU1 AC008413.1-201ENST00000511864 177 ntBASIC2.17□□□□□ -2.06
CCDC197Q8NCU1 RNU4-29P-201ENST00000515943 174 ntBASIC2.17□□□□□ -2.06
CCDC197Q8NCU1 COPS8P3-201ENST00000526024 482 ntBASIC2.17□□□□□ -2.06
CCDC197Q8NCU1 AC021269.2-201ENST00000532318 330 ntBASIC2.17□□□□□ -2.06
CCDC197Q8NCU1 CBX3P7-201ENST00000532876 502 ntBASIC2.17□□□□□ -2.06
CCDC197Q8NCU1 AK6P1-201ENST00000540219 478 ntBASIC2.17□□□□□ -2.06
CCDC197Q8NCU1 AL512310.1-201ENST00000548639 172 ntBASIC2.17□□□□□ -2.06
CCDC197Q8NCU1 OR11H5P-201ENST00000554039 926 ntBASIC2.17□□□□□ -2.06
CCDC197Q8NCU1 PSMA3P-201ENST00000555485 635 ntBASIC2.17□□□□□ -2.06
CCDC197Q8NCU1 AL118558.2-201ENST00000556294 238 ntBASIC2.17□□□□□ -2.06
CCDC197Q8NCU1 HMGB1P33-201ENST00000563485 527 ntBASIC2.17□□□□□ -2.06
CCDC197Q8NCU1 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC197Q8NCU1 EIF1P4-201ENST00000572664 335 ntBASIC2.17□□□□□ -2.06
CCDC197Q8NCU1 AL138963.2-201ENST00000605137 226 ntBASIC2.17□□□□□ -2.06
CCDC197Q8NCU1 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.17□□□□□ -2.06
CCDC197Q8NCU1 AC012314.7-201ENST00000619693 93 ntBASIC2.17□□□□□ -2.06
CCDC197Q8NCU1 AC009831.4-201ENST00000620744 325 ntBASIC2.17□□□□□ -2.06
CCDC197Q8NCU1 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC197Q8NCU1 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC197Q8NCU1 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.17□□□□□ -2.06
CCDC197Q8NCU1 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC197Q8NCU1 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.16□□□□□ -2.06
CCDC197Q8NCU1 RNU6-529P-201ENST00000363383 104 ntBASIC2.16□□□□□ -2.06
CCDC197Q8NCU1 SNORA38-201ENST00000363946 132 ntBASIC2.16□□□□□ -2.06
CCDC197Q8NCU1 RNU6-38P-201ENST00000384085 107 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms