Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC4.94□□□□□ -1.62
SCUBE3Q8IX30 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SCUBE3Q8IX30 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
SCUBE3Q8IX30 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SCUBE3Q8IX30 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SCUBE3Q8IX30 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.94□□□□□ -1.62
SCUBE3Q8IX30 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.94□□□□□ -1.62
SCUBE3Q8IX30 AP000542.2-201ENST00000623199 6179 ntBASIC4.93□□□□□ -1.62
SCUBE3Q8IX30 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
SCUBE3Q8IX30 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SCUBE3Q8IX30 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SCUBE3Q8IX30 AC106871.1-201ENST00000568324 3102 ntBASIC4.93□□□□□ -1.62
SCUBE3Q8IX30 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SCUBE3Q8IX30 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.93□□□□□ -1.62
SCUBE3Q8IX30 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SCUBE3Q8IX30 RNA5SP388-201ENST00000362584 119 ntBASIC4.93□□□□□ -1.62
SCUBE3Q8IX30 RNU6-1280P-201ENST00000365211 107 ntBASIC4.93□□□□□ -1.62
SCUBE3Q8IX30 AL512604.1-201ENST00000404812 257 ntBASIC4.93□□□□□ -1.62
SCUBE3Q8IX30 H2AFZP5-201ENST00000446960 382 ntBASIC4.93□□□□□ -1.62
SCUBE3Q8IX30 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SCUBE3Q8IX30 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SCUBE3Q8IX30 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.93□□□□□ -1.62
SCUBE3Q8IX30 RN7SKP21-201ENST00000516503 220 ntBASIC4.93□□□□□ -1.62
SCUBE3Q8IX30 RNU6-537P-201ENST00000517277 103 ntBASIC4.93□□□□□ -1.62
SCUBE3Q8IX30 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC4.93□□□□□ -1.62
SCUBE3Q8IX30 AC009163.5-201ENST00000575421 637 ntBASIC4.93□□□□□ -1.62
SCUBE3Q8IX30 AC011471.1-201ENST00000585766 187 ntBASIC4.93□□□□□ -1.62
SCUBE3Q8IX30 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.93□□□□□ -1.62
SCUBE3Q8IX30 UGP2-230ENST00000626380 276 ntTSL 5 BASIC4.93□□□□□ -1.62
SCUBE3Q8IX30 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SCUBE3Q8IX30 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SCUBE3Q8IX30 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
SCUBE3Q8IX30 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
SCUBE3Q8IX30 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SCUBE3Q8IX30 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC4.92□□□□□ -1.62
SCUBE3Q8IX30 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SCUBE3Q8IX30 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
SCUBE3Q8IX30 NEAT1-202ENST00000501122 22743 ntBASIC4.92□□□□□ -1.62
SCUBE3Q8IX30 SNORD73B-201ENST00000364394 72 ntBASIC4.92□□□□□ -1.62
SCUBE3Q8IX30 Y_RNA.280-201ENST00000364765 112 ntBASIC4.92□□□□□ -1.62
SCUBE3Q8IX30 RNA5SP479-201ENST00000364858 117 ntBASIC4.92□□□□□ -1.62
SCUBE3Q8IX30 MIR208B-201ENST00000401172 77 ntBASIC4.92□□□□□ -1.62
SCUBE3Q8IX30 MIR298-201ENST00000401212 88 ntBASIC4.92□□□□□ -1.62
SCUBE3Q8IX30 MIR1193-201ENST00000408109 78 ntBASIC4.92□□□□□ -1.62
SCUBE3Q8IX30 AC245047.4-201ENST00000433189 144 ntBASIC4.92□□□□□ -1.62
SCUBE3Q8IX30 snoU13.4-201ENST00000458916 104 ntBASIC4.92□□□□□ -1.62
SCUBE3Q8IX30 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.92□□□□□ -1.62
SCUBE3Q8IX30 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.92□□□□□ -1.62
SCUBE3Q8IX30 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.92□□□□□ -1.62
SCUBE3Q8IX30 AL162713.1-201ENST00000604480 262 ntBASIC4.92□□□□□ -1.62
SCUBE3Q8IX30 AC012468.1-201ENST00000604888 430 ntBASIC4.92□□□□□ -1.62
SCUBE3Q8IX30 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.92□□□□□ -1.62
SCUBE3Q8IX30 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SCUBE3Q8IX30 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
SCUBE3Q8IX30 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.92□□□□□ -1.62
SCUBE3Q8IX30 AL672167.1-203ENST00000641299 2975 ntBASIC4.92□□□□□ -1.62
SCUBE3Q8IX30 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SCUBE3Q8IX30 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
SCUBE3Q8IX30 AC022336.2-201ENST00000568966 2538 ntBASIC4.91□□□□□ -1.62
SCUBE3Q8IX30 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SCUBE3Q8IX30 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SCUBE3Q8IX30 ZFRP1-201ENST00000457579 2970 ntBASIC4.91□□□□□ -1.62
SCUBE3Q8IX30 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SCUBE3Q8IX30 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
SCUBE3Q8IX30 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
SCUBE3Q8IX30 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
SCUBE3Q8IX30 MIR450A1-201ENST00000362262 91 ntBASIC4.91□□□□□ -1.62
SCUBE3Q8IX30 RNU1-108P-201ENST00000362556 161 ntBASIC4.91□□□□□ -1.62
SCUBE3Q8IX30 RNU6-335P-201ENST00000364563 113 ntBASIC4.91□□□□□ -1.62
SCUBE3Q8IX30 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SCUBE3Q8IX30 U1.1-201ENST00000384101 164 ntBASIC4.91□□□□□ -1.62
SCUBE3Q8IX30 RNU6-217P-201ENST00000384164 104 ntBASIC4.91□□□□□ -1.62
SCUBE3Q8IX30 RNA5SP332-201ENST00000391063 115 ntBASIC4.91□□□□□ -1.62
SCUBE3Q8IX30 RN7SKP267-201ENST00000410381 285 ntBASIC4.91□□□□□ -1.62
SCUBE3Q8IX30 AC103975.1-201ENST00000482506 483 ntBASIC4.91□□□□□ -1.62
SCUBE3Q8IX30 AC105129.1-201ENST00000560250 297 ntBASIC4.91□□□□□ -1.62
SCUBE3Q8IX30 MIR378D2-201ENST00000580636 98 ntBASIC4.91□□□□□ -1.62
SCUBE3Q8IX30 AC120024.3-201ENST00000603167 156 ntBASIC4.91□□□□□ -1.62
SCUBE3Q8IX30 AL591034.3-201ENST00000605511 685 ntBASIC4.91□□□□□ -1.62
SCUBE3Q8IX30 MIR8069-1-201ENST00000616627 86 ntBASIC4.91□□□□□ -1.62
SCUBE3Q8IX30 MIR8069-2-201ENST00000621412 86 ntBASIC4.91□□□□□ -1.62
SCUBE3Q8IX30 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
SCUBE3Q8IX30 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SCUBE3Q8IX30 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SCUBE3Q8IX30 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.91□□□□□ -1.62
SCUBE3Q8IX30 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SCUBE3Q8IX30 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
SCUBE3Q8IX30 MAPK10-349ENST00000641767 3661 ntBASIC4.91□□□□□ -1.62
SCUBE3Q8IX30 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.91□□□□□ -1.62
SCUBE3Q8IX30 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SCUBE3Q8IX30 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.9□□□□□ -1.62
SCUBE3Q8IX30 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.9□□□□□ -1.62
SCUBE3Q8IX30 AP001642.1-201ENST00000624727 2117 ntBASIC4.9□□□□□ -1.62
SCUBE3Q8IX30 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SCUBE3Q8IX30 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SCUBE3Q8IX30 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SCUBE3Q8IX30 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SCUBE3Q8IX30 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SCUBE3Q8IX30 Y_RNA.114-201ENST00000363265 113 ntBASIC4.9□□□□□ -1.63
SCUBE3Q8IX30 RNU1-83P-201ENST00000363426 164 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms