Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 Y_RNA.277-201ENST00000364754 102 ntBASIC4.36□□□□□ -1.71
NPAS4Q8IUM7 SNORD32A-201ENST00000364805 84 ntBASIC4.36□□□□□ -1.71
NPAS4Q8IUM7 Y_RNA.504-201ENST00000384481 104 ntBASIC4.36□□□□□ -1.71
NPAS4Q8IUM7 MIR30B-201ENST00000384850 88 ntBASIC4.36□□□□□ -1.71
NPAS4Q8IUM7 MIR767-201ENST00000390228 109 ntBASIC4.36□□□□□ -1.71
NPAS4Q8IUM7 AC096920.1-201ENST00000423991 241 ntBASIC4.36□□□□□ -1.71
NPAS4Q8IUM7 AP000907.1-201ENST00000428428 510 ntBASIC4.36□□□□□ -1.71
NPAS4Q8IUM7 RPL21P40-201ENST00000428586 483 ntBASIC4.36□□□□□ -1.71
NPAS4Q8IUM7 AC009296.1-201ENST00000443146 155 ntBASIC4.36□□□□□ -1.71
NPAS4Q8IUM7 AL031659.1-201ENST00000447075 539 ntBASIC4.36□□□□□ -1.71
NPAS4Q8IUM7 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.36□□□□□ -1.71
NPAS4Q8IUM7 RN7SL323P-201ENST00000494712 295 ntBASIC4.36□□□□□ -1.71
NPAS4Q8IUM7 AC026784.1-201ENST00000507986 352 ntBASIC4.36□□□□□ -1.71
NPAS4Q8IUM7 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.36□□□□□ -1.71
NPAS4Q8IUM7 RN7SKP272-201ENST00000516988 232 ntBASIC4.36□□□□□ -1.71
NPAS4Q8IUM7 IGKV2-23-201ENST00000518729 323 ntBASIC4.36□□□□□ -1.71
NPAS4Q8IUM7 DEFB108E-201ENST00000524692 240 ntBASIC4.36□□□□□ -1.71
NPAS4Q8IUM7 AC021231.3-201ENST00000558497 370 ntBASIC4.36□□□□□ -1.71
NPAS4Q8IUM7 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.36□□□□□ -1.71
NPAS4Q8IUM7 HSPA8P1-201ENST00000425843 1833 ntBASIC4.36□□□□□ -1.71
NPAS4Q8IUM7 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NPAS4Q8IUM7 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
NPAS4Q8IUM7 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.36□□□□□ -1.71
NPAS4Q8IUM7 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NPAS4Q8IUM7 AC010889.1-201ENST00000566193 2666 ntBASIC4.36□□□□□ -1.71
NPAS4Q8IUM7 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.35□□□□□ -1.71
NPAS4Q8IUM7 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.35□□□□□ -1.71
NPAS4Q8IUM7 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NPAS4Q8IUM7 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NPAS4Q8IUM7 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.35□□□□□ -1.71
NPAS4Q8IUM7 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NPAS4Q8IUM7 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NPAS4Q8IUM7 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NPAS4Q8IUM7 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
NPAS4Q8IUM7 Z75746.1-201ENST00000440243 2080 ntBASIC4.35□□□□□ -1.71
NPAS4Q8IUM7 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
NPAS4Q8IUM7 RNU1-76P-201ENST00000362903 159 ntBASIC4.35□□□□□ -1.71
NPAS4Q8IUM7 SNORD35B-201ENST00000363660 87 ntBASIC4.35□□□□□ -1.71
NPAS4Q8IUM7 Y_RNA.269-201ENST00000364685 89 ntBASIC4.35□□□□□ -1.71
NPAS4Q8IUM7 SNORA73.2-201ENST00000364946 201 ntBASIC4.35□□□□□ -1.71
NPAS4Q8IUM7 MIR153-2-201ENST00000385225 87 ntBASIC4.35□□□□□ -1.71
NPAS4Q8IUM7 MIR591-201ENST00000385290 95 ntBASIC4.35□□□□□ -1.71
NPAS4Q8IUM7 RNU6-750P-201ENST00000390946 107 ntBASIC4.35□□□□□ -1.71
NPAS4Q8IUM7 PTMAP5-201ENST00000393073 333 ntBASIC4.35□□□□□ -1.71
NPAS4Q8IUM7 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
NPAS4Q8IUM7 MTHFD2P2-201ENST00000407725 247 ntBASIC4.35□□□□□ -1.71
NPAS4Q8IUM7 SNORA11.1-201ENST00000408133 129 ntBASIC4.35□□□□□ -1.71
NPAS4Q8IUM7 AC023141.4-201ENST00000412031 328 ntBASIC4.35□□□□□ -1.71
NPAS4Q8IUM7 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.35□□□□□ -1.71
NPAS4Q8IUM7 YME1L1P1-201ENST00000429435 297 ntBASIC4.35□□□□□ -1.71
NPAS4Q8IUM7 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.35□□□□□ -1.71
NPAS4Q8IUM7 RPL39P29-201ENST00000447779 157 ntBASIC4.35□□□□□ -1.71
NPAS4Q8IUM7 AL031183.1-201ENST00000457667 207 ntBASIC4.35□□□□□ -1.71
NPAS4Q8IUM7 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC4.35□□□□□ -1.71
NPAS4Q8IUM7 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.35□□□□□ -1.71
NPAS4Q8IUM7 RNU7-143P-201ENST00000516781 65 ntBASIC4.35□□□□□ -1.71
NPAS4Q8IUM7 MIR3133-201ENST00000583157 78 ntBASIC4.35□□□□□ -1.71
NPAS4Q8IUM7 AC091152.3-201ENST00000604227 325 ntBASIC4.35□□□□□ -1.71
NPAS4Q8IUM7 RPL23AP88-201ENST00000605759 454 ntBASIC4.35□□□□□ -1.71
NPAS4Q8IUM7 AL391261.4-201ENST00000616012 481 ntBASIC4.35□□□□□ -1.71
NPAS4Q8IUM7 MIR7702-201ENST00000621931 59 ntBASIC4.35□□□□□ -1.71
NPAS4Q8IUM7 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NPAS4Q8IUM7 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NPAS4Q8IUM7 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NPAS4Q8IUM7 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NPAS4Q8IUM7 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.34□□□□□ -1.71
NPAS4Q8IUM7 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NPAS4Q8IUM7 MIR335-201ENST00000362173 94 ntBASIC4.34□□□□□ -1.71
NPAS4Q8IUM7 SNORA63.1-201ENST00000362493 131 ntBASIC4.34□□□□□ -1.71
NPAS4Q8IUM7 RNU4-56P-201ENST00000364700 142 ntBASIC4.34□□□□□ -1.71
NPAS4Q8IUM7 Y_RNA.458-201ENST00000384240 102 ntBASIC4.34□□□□□ -1.71
NPAS4Q8IUM7 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
NPAS4Q8IUM7 PCNPP3-201ENST00000393579 471 ntBASIC4.34□□□□□ -1.71
NPAS4Q8IUM7 AC138623.1-201ENST00000418060 216 ntBASIC4.34□□□□□ -1.71
NPAS4Q8IUM7 AL591419.1-201ENST00000427423 339 ntBASIC4.34□□□□□ -1.71
NPAS4Q8IUM7 AL353748.1-201ENST00000440753 474 ntBASIC4.34□□□□□ -1.71
NPAS4Q8IUM7 AC022795.1-201ENST00000473808 480 ntBASIC4.34□□□□□ -1.71
NPAS4Q8IUM7 RPL23AP75-201ENST00000491601 451 ntBASIC4.34□□□□□ -1.71
NPAS4Q8IUM7 ANXA2P1-201ENST00000505539 926 ntBASIC4.34□□□□□ -1.71
NPAS4Q8IUM7 AC074250.1-201ENST00000511117 192 ntBASIC4.34□□□□□ -1.71
NPAS4Q8IUM7 RNU6-567P-201ENST00000516746 107 ntBASIC4.34□□□□□ -1.71
NPAS4Q8IUM7 AC007458.1-201ENST00000542812 373 ntBASIC4.34□□□□□ -1.71
NPAS4Q8IUM7 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.34□□□□□ -1.71
NPAS4Q8IUM7 RPL21P7-201ENST00000557463 483 ntBASIC4.34□□□□□ -1.71
NPAS4Q8IUM7 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NPAS4Q8IUM7 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.34□□□□□ -1.71
NPAS4Q8IUM7 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NPAS4Q8IUM7 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.34□□□□□ -1.71
NPAS4Q8IUM7 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NPAS4Q8IUM7 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
NPAS4Q8IUM7 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
NPAS4Q8IUM7 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.33□□□□□ -1.72
NPAS4Q8IUM7 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.33□□□□□ -1.72
NPAS4Q8IUM7 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NPAS4Q8IUM7 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
NPAS4Q8IUM7 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NPAS4Q8IUM7 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.33□□□□□ -1.72
NPAS4Q8IUM7 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NPAS4Q8IUM7 RNU6-1159P-201ENST00000362933 107 ntBASIC4.33□□□□□ -1.72
NPAS4Q8IUM7 RNA5SP387-201ENST00000364226 106 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms