Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 RPL23AP1-201ENST00000428990 471 ntBASIC4.54□□□□□ -1.68
LYSMD3Q7Z3D4 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.54□□□□□ -1.68
LYSMD3Q7Z3D4 AC010285.1-201ENST00000470580 392 ntBASIC4.54□□□□□ -1.68
LYSMD3Q7Z3D4 UQCRHP4-201ENST00000471686 272 ntBASIC4.54□□□□□ -1.68
LYSMD3Q7Z3D4 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.54□□□□□ -1.68
LYSMD3Q7Z3D4 SNORA70.16-201ENST00000516390 95 ntBASIC4.54□□□□□ -1.68
LYSMD3Q7Z3D4 RNU1-103P-201ENST00000516502 125 ntBASIC4.54□□□□□ -1.68
LYSMD3Q7Z3D4 Y_RNA.712-201ENST00000517011 92 ntBASIC4.54□□□□□ -1.68
LYSMD3Q7Z3D4 RNU2-12P-201ENST00000517216 168 ntBASIC4.54□□□□□ -1.68
LYSMD3Q7Z3D4 AC107918.3-201ENST00000533272 382 ntBASIC4.54□□□□□ -1.68
LYSMD3Q7Z3D4 AP004242.1-201ENST00000533701 349 ntBASIC4.54□□□□□ -1.68
LYSMD3Q7Z3D4 CR383656.8-201ENST00000549046 145 ntBASIC4.54□□□□□ -1.68
LYSMD3Q7Z3D4 PARP1P2-201ENST00000556806 195 ntBASIC4.54□□□□□ -1.68
LYSMD3Q7Z3D4 MIR4458-201ENST00000578872 75 ntBASIC4.54□□□□□ -1.68
LYSMD3Q7Z3D4 AC091178.1-203ENST00000584586 279 ntBASIC4.54□□□□□ -1.68
LYSMD3Q7Z3D4 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.54□□□□□ -1.68
LYSMD3Q7Z3D4 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.54□□□□□ -1.68
LYSMD3Q7Z3D4 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.54□□□□□ -1.68
LYSMD3Q7Z3D4 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
LYSMD3Q7Z3D4 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LYSMD3Q7Z3D4 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
LYSMD3Q7Z3D4 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
LYSMD3Q7Z3D4 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LYSMD3Q7Z3D4 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
LYSMD3Q7Z3D4 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LYSMD3Q7Z3D4 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.53□□□□□ -1.68
LYSMD3Q7Z3D4 OR56B2P-202ENST00000641377 2453 ntBASIC4.53□□□□□ -1.68
LYSMD3Q7Z3D4 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
LYSMD3Q7Z3D4 AC118273.1-201ENST00000525324 3006 ntBASIC4.53□□□□□ -1.68
LYSMD3Q7Z3D4 CPHL1P-201ENST00000461341 3407 ntBASIC4.53□□□□□ -1.68
LYSMD3Q7Z3D4 ASNSP1-201ENST00000518311 1939 ntBASIC4.53□□□□□ -1.68
LYSMD3Q7Z3D4 AC092268.1-201ENST00000342691 405 ntBASIC4.53□□□□□ -1.68
LYSMD3Q7Z3D4 RNU6-727P-201ENST00000363592 107 ntBASIC4.53□□□□□ -1.68
LYSMD3Q7Z3D4 RNU6-1180P-201ENST00000364935 107 ntBASIC4.53□□□□□ -1.68
LYSMD3Q7Z3D4 RNU6-140P-201ENST00000384566 108 ntBASIC4.53□□□□□ -1.68
LYSMD3Q7Z3D4 MIR129-1-201ENST00000384972 72 ntBASIC4.53□□□□□ -1.68
LYSMD3Q7Z3D4 MIR616-201ENST00000385293 97 ntBASIC4.53□□□□□ -1.68
LYSMD3Q7Z3D4 SDHCP2-201ENST00000398565 501 ntBASIC4.53□□□□□ -1.68
LYSMD3Q7Z3D4 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.53□□□□□ -1.68
LYSMD3Q7Z3D4 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
LYSMD3Q7Z3D4 AC244098.2-201ENST00000422068 99 ntBASIC4.53□□□□□ -1.68
LYSMD3Q7Z3D4 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC4.53□□□□□ -1.68
LYSMD3Q7Z3D4 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.53□□□□□ -1.68
LYSMD3Q7Z3D4 AC244670.1-201ENST00000436879 112 ntBASIC4.53□□□□□ -1.68
LYSMD3Q7Z3D4 AL121914.1-201ENST00000450188 156 ntBASIC4.53□□□□□ -1.68
LYSMD3Q7Z3D4 AC010469.1-201ENST00000463864 576 ntBASIC4.53□□□□□ -1.68
LYSMD3Q7Z3D4 RNA5SP446-201ENST00000515955 82 ntBASIC4.53□□□□□ -1.68
LYSMD3Q7Z3D4 NACAP3-201ENST00000552100 481 ntBASIC4.53□□□□□ -1.68
LYSMD3Q7Z3D4 MTND5P34-201ENST00000568888 325 ntBASIC4.53□□□□□ -1.68
LYSMD3Q7Z3D4 AC005255.1-201ENST00000593748 216 ntBASIC4.53□□□□□ -1.68
LYSMD3Q7Z3D4 AC015813.4-201ENST00000610469 179 ntBASIC4.53□□□□□ -1.68
LYSMD3Q7Z3D4 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC4.53□□□□□ -1.68
LYSMD3Q7Z3D4 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LYSMD3Q7Z3D4 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
LYSMD3Q7Z3D4 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.53□□□□□ -1.68
LYSMD3Q7Z3D4 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LYSMD3Q7Z3D4 ZNF702P-202ENST00000434269 1966 ntBASIC4.53□□□□□ -1.68
LYSMD3Q7Z3D4 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
LYSMD3Q7Z3D4 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LYSMD3Q7Z3D4 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LYSMD3Q7Z3D4 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
LYSMD3Q7Z3D4 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LYSMD3Q7Z3D4 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LYSMD3Q7Z3D4 RNU1-108P-201ENST00000362556 161 ntBASIC4.52□□□□□ -1.69
LYSMD3Q7Z3D4 RNU6-799P-201ENST00000363567 107 ntBASIC4.52□□□□□ -1.69
LYSMD3Q7Z3D4 RNY1P11-201ENST00000363759 113 ntBASIC4.52□□□□□ -1.69
LYSMD3Q7Z3D4 SNORA70.2-201ENST00000364506 135 ntBASIC4.52□□□□□ -1.69
LYSMD3Q7Z3D4 Y_RNA.287-201ENST00000364853 94 ntBASIC4.52□□□□□ -1.69
LYSMD3Q7Z3D4 RNU1-100P-201ENST00000365255 165 ntBASIC4.52□□□□□ -1.69
LYSMD3Q7Z3D4 RNA5SP151-201ENST00000365632 117 ntBASIC4.52□□□□□ -1.69
LYSMD3Q7Z3D4 RNU6-643P-201ENST00000384018 107 ntBASIC4.52□□□□□ -1.69
LYSMD3Q7Z3D4 RNA5SP89-201ENST00000410300 108 ntBASIC4.52□□□□□ -1.69
LYSMD3Q7Z3D4 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.52□□□□□ -1.69
LYSMD3Q7Z3D4 AC009237.8-201ENST00000445492 379 ntBASIC4.52□□□□□ -1.69
LYSMD3Q7Z3D4 MTATP6P7-201ENST00000453315 681 ntBASIC4.52□□□□□ -1.69
LYSMD3Q7Z3D4 AC245047.8-201ENST00000456455 284 ntBASIC4.52□□□□□ -1.69
LYSMD3Q7Z3D4 AC146507.2-201ENST00000460608 476 ntBASIC4.52□□□□□ -1.69
LYSMD3Q7Z3D4 AC007215.1-201ENST00000464893 276 ntBASIC4.52□□□□□ -1.69
LYSMD3Q7Z3D4 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.52□□□□□ -1.69
LYSMD3Q7Z3D4 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC4.52□□□□□ -1.69
LYSMD3Q7Z3D4 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.52□□□□□ -1.69
LYSMD3Q7Z3D4 RNU5E-3P-201ENST00000515913 68 ntBASIC4.52□□□□□ -1.69
LYSMD3Q7Z3D4 AC090281.1-201ENST00000523019 276 ntBASIC4.52□□□□□ -1.69
LYSMD3Q7Z3D4 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.52□□□□□ -1.69
LYSMD3Q7Z3D4 TOMM20P2-201ENST00000540082 421 ntBASIC4.52□□□□□ -1.69
LYSMD3Q7Z3D4 MIR3646-201ENST00000578301 84 ntBASIC4.52□□□□□ -1.69
LYSMD3Q7Z3D4 MIR4715-201ENST00000584117 79 ntBASIC4.52□□□□□ -1.69
LYSMD3Q7Z3D4 MIR6758-201ENST00000620653 63 ntBASIC4.52□□□□□ -1.69
LYSMD3Q7Z3D4 MIR6844-201ENST00000637122 62 ntBASIC4.52□□□□□ -1.69
LYSMD3Q7Z3D4 SCN1A-220ENST00000641603 12506 ntBASIC4.52□□□□□ -1.69
LYSMD3Q7Z3D4 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LYSMD3Q7Z3D4 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.52□□□□□ -1.69
LYSMD3Q7Z3D4 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LYSMD3Q7Z3D4 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.52□□□□□ -1.69
LYSMD3Q7Z3D4 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
LYSMD3Q7Z3D4 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
LYSMD3Q7Z3D4 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.51□□□□□ -1.69
LYSMD3Q7Z3D4 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.51□□□□□ -1.69
LYSMD3Q7Z3D4 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.51□□□□□ -1.69
LYSMD3Q7Z3D4 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms