Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.84□□□□□ -1.79
E4F1Q66K89 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
E4F1Q66K89 RNU6-858P-201ENST00000362436 107 ntBASIC3.84□□□□□ -1.79
E4F1Q66K89 RNU6-805P-201ENST00000365643 106 ntBASIC3.84□□□□□ -1.79
E4F1Q66K89 Y_RNA.483-201ENST00000384380 101 ntBASIC3.84□□□□□ -1.79
E4F1Q66K89 Y_RNA.489-201ENST00000384410 101 ntBASIC3.84□□□□□ -1.79
E4F1Q66K89 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
E4F1Q66K89 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.84□□□□□ -1.79
E4F1Q66K89 MIR888-201ENST00000401186 77 ntBASIC3.84□□□□□ -1.79
E4F1Q66K89 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.84□□□□□ -1.79
E4F1Q66K89 RNU6-847P-201ENST00000411115 108 ntBASIC3.84□□□□□ -1.79
E4F1Q66K89 RN7SKP53-201ENST00000411337 315 ntBASIC3.84□□□□□ -1.79
E4F1Q66K89 AL356968.1-201ENST00000416622 474 ntBASIC3.84□□□□□ -1.79
E4F1Q66K89 AL513124.1-201ENST00000450410 614 ntBASIC3.84□□□□□ -1.79
E4F1Q66K89 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.84□□□□□ -1.79
E4F1Q66K89 RPS4XP13-201ENST00000483219 789 ntBASIC3.84□□□□□ -1.79
E4F1Q66K89 RPS29P20-201ENST00000489592 171 ntBASIC3.84□□□□□ -1.79
E4F1Q66K89 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.84□□□□□ -1.79
E4F1Q66K89 RNU6-408P-201ENST00000515910 100 ntBASIC3.84□□□□□ -1.79
E4F1Q66K89 RNU6-1143P-201ENST00000516125 104 ntBASIC3.84□□□□□ -1.79
E4F1Q66K89 RNU2-27P-201ENST00000516185 142 ntBASIC3.84□□□□□ -1.79
E4F1Q66K89 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.84□□□□□ -1.79
E4F1Q66K89 AC109329.1-201ENST00000518744 317 ntBASIC3.84□□□□□ -1.79
E4F1Q66K89 MRPS36P4-201ENST00000534436 298 ntBASIC3.84□□□□□ -1.79
E4F1Q66K89 AC104581.2-201ENST00000572227 430 ntBASIC3.84□□□□□ -1.79
E4F1Q66K89 AC005357.1-201ENST00000588399 301 ntBASIC3.84□□□□□ -1.79
E4F1Q66K89 RPL23AP78-201ENST00000599928 470 ntBASIC3.84□□□□□ -1.79
E4F1Q66K89 AC012468.1-201ENST00000604888 430 ntBASIC3.84□□□□□ -1.79
E4F1Q66K89 AL110115.1-201ENST00000614396 364 ntBASIC3.84□□□□□ -1.79
E4F1Q66K89 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
E4F1Q66K89 AC022336.2-201ENST00000568966 2538 ntBASIC3.84□□□□□ -1.8
E4F1Q66K89 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.84□□□□□ -1.8
E4F1Q66K89 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.83□□□□□ -1.8
E4F1Q66K89 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.83□□□□□ -1.8
E4F1Q66K89 PWAR6-201ENST00000552334 4618 ntBASIC3.83□□□□□ -1.8
E4F1Q66K89 RNU1-76P-201ENST00000362903 159 ntBASIC3.83□□□□□ -1.8
E4F1Q66K89 RNU6-942P-201ENST00000363002 107 ntBASIC3.83□□□□□ -1.8
E4F1Q66K89 U3.13-201ENST00000364804 214 ntBASIC3.83□□□□□ -1.8
E4F1Q66K89 Y_RNA.376-201ENST00000365638 108 ntBASIC3.83□□□□□ -1.8
E4F1Q66K89 RNU6-968P-201ENST00000384076 107 ntBASIC3.83□□□□□ -1.8
E4F1Q66K89 Y_RNA.447-201ENST00000384184 113 ntBASIC3.83□□□□□ -1.8
E4F1Q66K89 MT-TW-201ENST00000387382 68 ntBASIC3.83□□□□□ -1.8
E4F1Q66K89 RN7SKP156-201ENST00000410308 342 ntBASIC3.83□□□□□ -1.8
E4F1Q66K89 AC093578.1-201ENST00000415219 368 ntBASIC3.83□□□□□ -1.8
E4F1Q66K89 AC017083.1-201ENST00000428093 483 ntBASIC3.83□□□□□ -1.8
E4F1Q66K89 Z82188.1-201ENST00000436709 154 ntBASIC3.83□□□□□ -1.8
E4F1Q66K89 RPL23AP22-201ENST00000437556 453 ntBASIC3.83□□□□□ -1.8
E4F1Q66K89 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.83□□□□□ -1.8
E4F1Q66K89 FCF1P4-201ENST00000448326 183 ntBASIC3.83□□□□□ -1.8
E4F1Q66K89 RNA5SP310-201ENST00000459084 116 ntBASIC3.83□□□□□ -1.8
E4F1Q66K89 RN7SL594P-201ENST00000470590 287 ntBASIC3.83□□□□□ -1.8
E4F1Q66K89 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.83□□□□□ -1.8
E4F1Q66K89 RNU2-53P-201ENST00000516257 147 ntBASIC3.83□□□□□ -1.8
E4F1Q66K89 RNU6-570P-201ENST00000517051 105 ntBASIC3.83□□□□□ -1.8
E4F1Q66K89 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.83□□□□□ -1.8
E4F1Q66K89 AC034114.1-201ENST00000520293 285 ntBASIC3.83□□□□□ -1.8
E4F1Q66K89 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.83□□□□□ -1.8
E4F1Q66K89 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
E4F1Q66K89 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
E4F1Q66K89 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.83□□□□□ -1.8
E4F1Q66K89 AP001148.1-201ENST00000624124 2359 ntBASIC3.83□□□□□ -1.8
E4F1Q66K89 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
E4F1Q66K89 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.83□□□□□ -1.8
E4F1Q66K89 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
E4F1Q66K89 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
E4F1Q66K89 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
E4F1Q66K89 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.82□□□□□ -1.8
E4F1Q66K89 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
E4F1Q66K89 AC090740.1-201ENST00000623193 2262 ntBASIC3.82□□□□□ -1.8
E4F1Q66K89 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
E4F1Q66K89 AC010615.1-201ENST00000594254 1764 ntBASIC3.82□□□□□ -1.8
E4F1Q66K89 SNORD56.1-201ENST00000362913 68 ntBASIC3.82□□□□□ -1.8
E4F1Q66K89 RNA5SP51-201ENST00000364750 119 ntBASIC3.82□□□□□ -1.8
E4F1Q66K89 SNORA73.2-201ENST00000364946 201 ntBASIC3.82□□□□□ -1.8
E4F1Q66K89 RNU1-140P-201ENST00000365040 165 ntBASIC3.82□□□□□ -1.8
E4F1Q66K89 RNU6-1035P-201ENST00000384477 107 ntBASIC3.82□□□□□ -1.8
E4F1Q66K89 MT-TR-201ENST00000387439 65 ntBASIC3.82□□□□□ -1.8
E4F1Q66K89 RAB9AP3-201ENST00000412737 573 ntBASIC3.82□□□□□ -1.8
E4F1Q66K89 AC126124.2-201ENST00000413542 321 ntBASIC3.82□□□□□ -1.8
E4F1Q66K89 AC004975.1-201ENST00000428733 208 ntBASIC3.82□□□□□ -1.8
E4F1Q66K89 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.82□□□□□ -1.8
E4F1Q66K89 RPEP5-201ENST00000441137 268 ntBASIC3.82□□□□□ -1.8
E4F1Q66K89 AC243964.1-201ENST00000441814 261 ntBASIC3.82□□□□□ -1.8
E4F1Q66K89 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.82□□□□□ -1.8
E4F1Q66K89 AC125238.1-201ENST00000448842 249 ntBASIC3.82□□□□□ -1.8
E4F1Q66K89 RAB9AP1-201ENST00000449393 573 ntBASIC3.82□□□□□ -1.8
E4F1Q66K89 RPL26P9-201ENST00000457466 433 ntBASIC3.82□□□□□ -1.8
E4F1Q66K89 SNRPGP7-201ENST00000469016 106 ntBASIC3.82□□□□□ -1.8
E4F1Q66K89 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC3.82□□□□□ -1.8
E4F1Q66K89 AC023157.2-201ENST00000540596 141 ntBASIC3.82□□□□□ -1.8
E4F1Q66K89 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.82□□□□□ -1.8
E4F1Q66K89 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.82□□□□□ -1.8
E4F1Q66K89 AC243829.7-201ENST00000633081 225 ntBASIC3.82□□□□□ -1.8
E4F1Q66K89 U6.104-201ENST00000637979 90 ntBASIC3.82□□□□□ -1.8
E4F1Q66K89 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC3.82□□□□□ -1.8
E4F1Q66K89 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
E4F1Q66K89 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
E4F1Q66K89 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
E4F1Q66K89 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
E4F1Q66K89 Y_RNA.27-201ENST00000362540 103 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms