Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.91□□□□□ -1.62
RNF20Q5VTR2 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.91□□□□□ -1.62
RNF20Q5VTR2 FTLP6-201ENST00000355274 422 ntBASIC4.91□□□□□ -1.62
RNF20Q5VTR2 SNORA60-201ENST00000362396 134 ntBASIC4.91□□□□□ -1.62
RNF20Q5VTR2 RNU6-1290P-201ENST00000362957 109 ntBASIC4.91□□□□□ -1.62
RNF20Q5VTR2 AC006011.1-201ENST00000442758 349 ntBASIC4.91□□□□□ -1.62
RNF20Q5VTR2 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
RNF20Q5VTR2 RN7SL271P-201ENST00000487601 295 ntBASIC4.91□□□□□ -1.62
RNF20Q5VTR2 AC020593.1-201ENST00000507399 299 ntBASIC4.91□□□□□ -1.62
RNF20Q5VTR2 RNU7-143P-201ENST00000516781 65 ntBASIC4.91□□□□□ -1.62
RNF20Q5VTR2 RNU6-1073P-201ENST00000517182 106 ntBASIC4.91□□□□□ -1.62
RNF20Q5VTR2 AL357075.2-201ENST00000614906 189 ntBASIC4.91□□□□□ -1.62
RNF20Q5VTR2 MIR8059-201ENST00000620427 81 ntBASIC4.91□□□□□ -1.62
RNF20Q5VTR2 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
RNF20Q5VTR2 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.91□□□□□ -1.62
RNF20Q5VTR2 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
RNF20Q5VTR2 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.91□□□□□ -1.62
RNF20Q5VTR2 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.9□□□□□ -1.62
RNF20Q5VTR2 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
RNF20Q5VTR2 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.9□□□□□ -1.62
RNF20Q5VTR2 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
RNF20Q5VTR2 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
RNF20Q5VTR2 MARK2P15-201ENST00000432204 2186 ntBASIC4.9□□□□□ -1.62
RNF20Q5VTR2 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
RNF20Q5VTR2 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
RNF20Q5VTR2 Y_RNA.262-201ENST00000364641 102 ntBASIC4.9□□□□□ -1.63
RNF20Q5VTR2 RNU4-56P-201ENST00000364700 142 ntBASIC4.9□□□□□ -1.63
RNF20Q5VTR2 Y_RNA.435-201ENST00000384095 112 ntBASIC4.9□□□□□ -1.63
RNF20Q5VTR2 SNORA36A-201ENST00000384221 132 ntBASIC4.9□□□□□ -1.63
RNF20Q5VTR2 RNU2-51P-201ENST00000410708 197 ntBASIC4.9□□□□□ -1.63
RNF20Q5VTR2 RNU5E-9P-201ENST00000411164 104 ntBASIC4.9□□□□□ -1.63
RNF20Q5VTR2 BMS1P22-201ENST00000414726 313 ntBASIC4.9□□□□□ -1.63
RNF20Q5VTR2 OOSP1P1-201ENST00000423265 274 ntBASIC4.9□□□□□ -1.63
RNF20Q5VTR2 RPL18P10-201ENST00000425606 538 ntBASIC4.9□□□□□ -1.63
RNF20Q5VTR2 GPM6BP3-201ENST00000442797 145 ntBASIC4.9□□□□□ -1.63
RNF20Q5VTR2 AC010095.1-201ENST00000443543 144 ntBASIC4.9□□□□□ -1.63
RNF20Q5VTR2 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC4.9□□□□□ -1.63
RNF20Q5VTR2 AC146944.2-203ENST00000502493 354 ntBASIC4.9□□□□□ -1.63
RNF20Q5VTR2 AC139495.1-202ENST00000513164 354 ntBASIC4.9□□□□□ -1.63
RNF20Q5VTR2 ZNF204P-201ENST00000416749 2397 ntBASIC4.9□□□□□ -1.63
RNF20Q5VTR2 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RNF20Q5VTR2 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RNF20Q5VTR2 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.89□□□□□ -1.63
RNF20Q5VTR2 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.89□□□□□ -1.63
RNF20Q5VTR2 AC138623.1-201ENST00000418060 216 ntBASIC4.89□□□□□ -1.63
RNF20Q5VTR2 AC006463.2-201ENST00000473326 348 ntBASIC4.89□□□□□ -1.63
RNF20Q5VTR2 RN7SL481P-201ENST00000477764 299 ntBASIC4.89□□□□□ -1.63
RNF20Q5VTR2 RN7SL604P-201ENST00000492589 296 ntBASIC4.89□□□□□ -1.63
RNF20Q5VTR2 AP005660.1-201ENST00000522972 293 ntBASIC4.89□□□□□ -1.63
RNF20Q5VTR2 HSPE1P4-201ENST00000550617 308 ntBASIC4.89□□□□□ -1.63
RNF20Q5VTR2 AC055872.1-201ENST00000570978 278 ntBASIC4.89□□□□□ -1.63
RNF20Q5VTR2 AC025946.2-201ENST00000603398 234 ntBASIC4.89□□□□□ -1.63
RNF20Q5VTR2 AL138963.2-201ENST00000605137 226 ntBASIC4.89□□□□□ -1.63
RNF20Q5VTR2 AC068831.7-201ENST00000616954 363 ntBASIC4.89□□□□□ -1.63
RNF20Q5VTR2 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.89□□□□□ -1.63
RNF20Q5VTR2 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.89□□□□□ -1.63
RNF20Q5VTR2 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RNF20Q5VTR2 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RNF20Q5VTR2 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RNF20Q5VTR2 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RNF20Q5VTR2 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RNF20Q5VTR2 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.88□□□□□ -1.63
RNF20Q5VTR2 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.88□□□□□ -1.63
RNF20Q5VTR2 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RNF20Q5VTR2 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RNF20Q5VTR2 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RNF20Q5VTR2 SNORD35B-201ENST00000363660 87 ntBASIC4.88□□□□□ -1.63
RNF20Q5VTR2 Y_RNA.217-201ENST00000364214 105 ntBASIC4.88□□□□□ -1.63
RNF20Q5VTR2 Y_RNA.441-201ENST00000384123 112 ntBASIC4.88□□□□□ -1.63
RNF20Q5VTR2 RNU6-22P-201ENST00000384355 107 ntBASIC4.88□□□□□ -1.63
RNF20Q5VTR2 MIR544A-201ENST00000384855 91 ntBASIC4.88□□□□□ -1.63
RNF20Q5VTR2 SNORA3C-201ENST00000408792 125 ntBASIC4.88□□□□□ -1.63
RNF20Q5VTR2 AC092047.1-201ENST00000424997 240 ntBASIC4.88□□□□□ -1.63
RNF20Q5VTR2 RPL23AP95-201ENST00000426806 265 ntBASIC4.88□□□□□ -1.63
RNF20Q5VTR2 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.88□□□□□ -1.63
RNF20Q5VTR2 IFNA11P-201ENST00000446352 526 ntBASIC4.88□□□□□ -1.63
RNF20Q5VTR2 NDUFS5P3-201ENST00000450668 321 ntBASIC4.88□□□□□ -1.63
RNF20Q5VTR2 snoU13.6-201ENST00000458785 104 ntBASIC4.88□□□□□ -1.63
RNF20Q5VTR2 Y_RNA.641-201ENST00000459414 105 ntBASIC4.88□□□□□ -1.63
RNF20Q5VTR2 AC105137.1-201ENST00000484355 562 ntBASIC4.88□□□□□ -1.63
RNF20Q5VTR2 HMGB3P3-201ENST00000510526 400 ntBASIC4.88□□□□□ -1.63
RNF20Q5VTR2 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RNF20Q5VTR2 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RNF20Q5VTR2 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.88□□□□□ -1.63
RNF20Q5VTR2 MIR3145-201ENST00000580727 82 ntBASIC4.88□□□□□ -1.63
RNF20Q5VTR2 MIR5684-201ENST00000585074 65 ntBASIC4.88□□□□□ -1.63
RNF20Q5VTR2 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC4.88□□□□□ -1.63
RNF20Q5VTR2 AC091953.5-201ENST00000622919 233 ntBASIC4.88□□□□□ -1.63
RNF20Q5VTR2 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
RNF20Q5VTR2 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.87□□□□□ -1.63
RNF20Q5VTR2 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.87□□□□□ -1.63
RNF20Q5VTR2 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RNF20Q5VTR2 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.87□□□□□ -1.63
RNF20Q5VTR2 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RNF20Q5VTR2 Y_RNA.272-201ENST00000364696 102 ntBASIC4.87□□□□□ -1.63
RNF20Q5VTR2 Y_RNA.497-201ENST00000384447 98 ntBASIC4.87□□□□□ -1.63
RNF20Q5VTR2 MIR186-201ENST00000384988 86 ntBASIC4.87□□□□□ -1.63
RNF20Q5VTR2 U3.19-201ENST00000390893 196 ntBASIC4.87□□□□□ -1.63
RNF20Q5VTR2 FAR2P2-201ENST00000413041 594 ntBASIC4.87□□□□□ -1.63
RNF20Q5VTR2 HMGN2P21-201ENST00000447764 270 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms