Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ERVFC1P60507 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
ERVFC1P60507 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
ERVFC1P60507 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.01□□□□□ -1.77
ERVFC1P60507 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4□□□□□ -1.77
ERVFC1P60507 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4□□□□□ -1.77
ERVFC1P60507 RNU6-428P-201ENST00000362942 107 ntBASIC4□□□□□ -1.77
ERVFC1P60507 Y_RNA.123-201ENST00000363338 102 ntBASIC4□□□□□ -1.77
ERVFC1P60507 RNU6-47P-201ENST00000383866 107 ntBASIC4□□□□□ -1.77
ERVFC1P60507 MIR10A-201ENST00000385043 110 ntBASIC4□□□□□ -1.77
ERVFC1P60507 SNORA40C-201ENST00000391285 128 ntBASIC4□□□□□ -1.77
ERVFC1P60507 Z92545.1-201ENST00000411782 234 ntBASIC4□□□□□ -1.77
ERVFC1P60507 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC4□□□□□ -1.77
ERVFC1P60507 snoU13.30-201ENST00000458951 104 ntBASIC4□□□□□ -1.77
ERVFC1P60507 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4□□□□□ -1.77
ERVFC1P60507 PPBPP1-201ENST00000510807 373 ntBASIC4□□□□□ -1.77
ERVFC1P60507 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4□□□□□ -1.77
ERVFC1P60507 AC010265.1-201ENST00000513509 211 ntBASIC4□□□□□ -1.77
ERVFC1P60507 ATP5F1P5-201ENST00000526403 760 ntBASIC4□□□□□ -1.77
ERVFC1P60507 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4□□□□□ -1.77
ERVFC1P60507 SNORD113-5-201ENST00000607261 78 ntBASIC4□□□□□ -1.77
ERVFC1P60507 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4□□□□□ -1.77
ERVFC1P60507 U4.7-201ENST00000638126 106 ntBASIC4□□□□□ -1.77
ERVFC1P60507 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ERVFC1P60507 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ERVFC1P60507 AL365440.1-201ENST00000436135 2167 ntBASIC4□□□□□ -1.77
ERVFC1P60507 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
ERVFC1P60507 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4□□□□□ -1.77
ERVFC1P60507 AC008725.1-201ENST00000605123 2263 ntBASIC4□□□□□ -1.77
ERVFC1P60507 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4□□□□□ -1.77
ERVFC1P60507 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
ERVFC1P60507 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
ERVFC1P60507 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
ERVFC1P60507 DEFB108F-201ENST00000344638 222 ntBASIC3.99□□□□□ -1.77
ERVFC1P60507 Y_RNA.240-201ENST00000364469 95 ntBASIC3.99□□□□□ -1.77
ERVFC1P60507 RNU6-740P-201ENST00000364734 105 ntBASIC3.99□□□□□ -1.77
ERVFC1P60507 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.99□□□□□ -1.77
ERVFC1P60507 RNU6-17P-201ENST00000384245 107 ntBASIC3.99□□□□□ -1.77
ERVFC1P60507 RNU6-18P-201ENST00000384527 107 ntBASIC3.99□□□□□ -1.77
ERVFC1P60507 MIR34A-201ENST00000385130 110 ntBASIC3.99□□□□□ -1.77
ERVFC1P60507 RPL19P1-201ENST00000411635 428 ntBASIC3.99□□□□□ -1.77
ERVFC1P60507 Z85995.1-201ENST00000415547 335 ntBASIC3.99□□□□□ -1.77
ERVFC1P60507 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.99□□□□□ -1.77
ERVFC1P60507 CYCSP32-201ENST00000440548 321 ntBASIC3.99□□□□□ -1.77
ERVFC1P60507 AL160314.1-201ENST00000490836 438 ntBASIC3.99□□□□□ -1.77
ERVFC1P60507 AC023141.12-201ENST00000512399 199 ntBASIC3.99□□□□□ -1.77
ERVFC1P60507 RNU6-377P-201ENST00000515965 102 ntBASIC3.99□□□□□ -1.77
ERVFC1P60507 SCARNA15.2-201ENST00000516409 127 ntBASIC3.99□□□□□ -1.77
ERVFC1P60507 RNU2-31P-201ENST00000516954 155 ntBASIC3.99□□□□□ -1.77
ERVFC1P60507 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.99□□□□□ -1.77
ERVFC1P60507 AP001485.1-201ENST00000604799 199 ntBASIC3.99□□□□□ -1.77
ERVFC1P60507 SNORA62.6-201ENST00000606322 83 ntBASIC3.99□□□□□ -1.77
ERVFC1P60507 AL591424.2-201ENST00000617023 128 ntBASIC3.99□□□□□ -1.77
ERVFC1P60507 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.99□□□□□ -1.77
ERVFC1P60507 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.99□□□□□ -1.77
ERVFC1P60507 MIR4727-201ENST00000622232 55 ntBASIC3.99□□□□□ -1.77
ERVFC1P60507 AC090617.7-201ENST00000623952 126 ntBASIC3.99□□□□□ -1.77
ERVFC1P60507 MIR3651-201ENST00000630427 90 ntBASIC3.99□□□□□ -1.77
ERVFC1P60507 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
ERVFC1P60507 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
ERVFC1P60507 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
ERVFC1P60507 OR4G2P-202ENST00000641004 1759 ntBASIC3.99□□□□□ -1.77
ERVFC1P60507 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
ERVFC1P60507 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
ERVFC1P60507 Y_RNA.82-201ENST00000363000 102 ntBASIC3.98□□□□□ -1.77
ERVFC1P60507 Y_RNA.92-201ENST00000363043 102 ntBASIC3.98□□□□□ -1.77
ERVFC1P60507 Y_RNA.235-201ENST00000364412 102 ntBASIC3.98□□□□□ -1.77
ERVFC1P60507 Y_RNA.306-201ENST00000365015 102 ntBASIC3.98□□□□□ -1.77
ERVFC1P60507 Y_RNA.312-201ENST00000365089 102 ntBASIC3.98□□□□□ -1.77
ERVFC1P60507 Y_RNA.322-201ENST00000365151 102 ntBASIC3.98□□□□□ -1.77
ERVFC1P60507 RNU6-1027P-201ENST00000383998 107 ntBASIC3.98□□□□□ -1.77
ERVFC1P60507 MIR513A2-201ENST00000385249 127 ntBASIC3.98□□□□□ -1.77
ERVFC1P60507 NDUFB4P4-201ENST00000404822 243 ntBASIC3.98□□□□□ -1.77
ERVFC1P60507 RNU6-394P-201ENST00000410735 107 ntBASIC3.98□□□□□ -1.77
ERVFC1P60507 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.98□□□□□ -1.77
ERVFC1P60507 AC005002.2-201ENST00000438228 269 ntBASIC3.98□□□□□ -1.77
ERVFC1P60507 SNORA71B-202ENST00000439232 272 ntBASIC3.98□□□□□ -1.77
ERVFC1P60507 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.98□□□□□ -1.77
ERVFC1P60507 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.98□□□□□ -1.77
ERVFC1P60507 Y_RNA.650-201ENST00000459002 102 ntBASIC3.98□□□□□ -1.77
ERVFC1P60507 RAC1P2-201ENST00000511164 579 ntBASIC3.98□□□□□ -1.77
ERVFC1P60507 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
ERVFC1P60507 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.98□□□□□ -1.77
ERVFC1P60507 SNORD116-28-201ENST00000516123 91 ntBASIC3.98□□□□□ -1.77
ERVFC1P60507 Y_RNA.777-201ENST00000516982 102 ntBASIC3.98□□□□□ -1.77
ERVFC1P60507 AK6P2-201ENST00000549020 471 ntBASIC3.98□□□□□ -1.77
ERVFC1P60507 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.98□□□□□ -1.77
ERVFC1P60507 HMGB1P14-201ENST00000557424 591 ntBASIC3.98□□□□□ -1.77
ERVFC1P60507 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.98□□□□□ -1.77
ERVFC1P60507 Y_RNA.771-201ENST00000598668 102 ntBASIC3.98□□□□□ -1.77
ERVFC1P60507 AC005000.2-201ENST00000605468 310 ntBASIC3.98□□□□□ -1.77
ERVFC1P60507 AC011476.5-201ENST00000615594 130 ntBASIC3.98□□□□□ -1.77
ERVFC1P60507 Y_RNA.789-201ENST00000622480 102 ntBASIC3.98□□□□□ -1.77
ERVFC1P60507 SCARNA4-201ENST00000629045 128 ntBASIC3.98□□□□□ -1.77
ERVFC1P60507 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
ERVFC1P60507 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.98□□□□□ -1.77
ERVFC1P60507 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
ERVFC1P60507 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
ERVFC1P60507 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
ERVFC1P60507 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms