Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 Y_RNA.255-201ENST00000364581 97 ntBASIC0.55□□□□□ -2.32
GTF2A1P52655 RNU6-487P-201ENST00000365430 104 ntBASIC0.55□□□□□ -2.32
GTF2A1P52655 MIR29B2-201ENST00000385055 81 ntBASIC0.55□□□□□ -2.32
GTF2A1P52655 SNORA40C-201ENST00000391285 128 ntBASIC0.55□□□□□ -2.32
GTF2A1P52655 RNU2-42P-201ENST00000410697 113 ntBASIC0.55□□□□□ -2.32
GTF2A1P52655 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.55□□□□□ -2.32
GTF2A1P52655 AC010099.3-201ENST00000423896 409 ntBASIC0.55□□□□□ -2.32
GTF2A1P52655 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
GTF2A1P52655 AC004941.2-201ENST00000427009 228 ntBASIC0.55□□□□□ -2.32
GTF2A1P52655 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC0.55□□□□□ -2.32
GTF2A1P52655 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.55□□□□□ -2.32
GTF2A1P52655 AL078601.1-201ENST00000444542 271 ntBASIC0.55□□□□□ -2.32
GTF2A1P52655 Z73417.1-201ENST00000447373 778 ntBASIC0.55□□□□□ -2.32
GTF2A1P52655 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.55□□□□□ -2.32
GTF2A1P52655 snoU13.14-201ENST00000459372 104 ntBASIC0.55□□□□□ -2.32
GTF2A1P52655 HMGN1P7-201ENST00000491722 313 ntBASIC0.55□□□□□ -2.32
GTF2A1P52655 RNA5SP437-201ENST00000517249 129 ntBASIC0.55□□□□□ -2.32
GTF2A1P52655 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.55□□□□□ -2.32
GTF2A1P52655 AC011604.1-201ENST00000545978 196 ntBASIC0.55□□□□□ -2.32
GTF2A1P52655 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
GTF2A1P52655 AC078795.2-201ENST00000602835 1252 ntBASIC0.55□□□□□ -2.32
GTF2A1P52655 AC090578.1-201ENST00000604955 591 ntBASIC0.55□□□□□ -2.32
GTF2A1P52655 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
GTF2A1P52655 AC040896.1-201ENST00000613819 479 ntBASIC0.55□□□□□ -2.32
GTF2A1P52655 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.55□□□□□ -2.32
GTF2A1P52655 MIR3529-201ENST00000637713 78 ntBASIC0.55□□□□□ -2.32
GTF2A1P52655 RNU6-392P-201ENST00000364926 101 ntBASIC0.54□□□□□ -2.32
GTF2A1P52655 RNU6-622P-201ENST00000384272 103 ntBASIC0.54□□□□□ -2.32
GTF2A1P52655 RNU6-166P-201ENST00000384371 107 ntBASIC0.54□□□□□ -2.32
GTF2A1P52655 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.54□□□□□ -2.32
GTF2A1P52655 EBAG9P1-201ENST00000418955 543 ntBASIC0.54□□□□□ -2.32
GTF2A1P52655 RPS15AP12-201ENST00000419498 388 ntBASIC0.54□□□□□ -2.32
GTF2A1P52655 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.54□□□□□ -2.32
GTF2A1P52655 ELOCP30-201ENST00000447108 299 ntBASIC0.54□□□□□ -2.32
GTF2A1P52655 MTND1P18-201ENST00000448191 573 ntBASIC0.54□□□□□ -2.32
GTF2A1P52655 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC0.54□□□□□ -2.32
GTF2A1P52655 AC079776.3-201ENST00000450665 370 ntBASIC0.54□□□□□ -2.32
GTF2A1P52655 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.54□□□□□ -2.32
GTF2A1P52655 PDCD5P2-201ENST00000507570 312 ntBASIC0.54□□□□□ -2.32
GTF2A1P52655 AC074344.1-201ENST00000512823 224 ntBASIC0.54□□□□□ -2.32
GTF2A1P52655 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.54□□□□□ -2.32
GTF2A1P52655 MTCYBP33-201ENST00000575007 1130 ntBASIC0.54□□□□□ -2.32
GTF2A1P52655 AP001004.1-201ENST00000582468 324 ntBASIC0.54□□□□□ -2.32
GTF2A1P52655 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.54□□□□□ -2.32
GTF2A1P52655 RNU6-1122P-201ENST00000384449 107 ntBASIC0.53□□□□□ -2.32
GTF2A1P52655 RNU6-14P-201ENST00000384630 106 ntBASIC0.53□□□□□ -2.32
GTF2A1P52655 RNU2-7P-201ENST00000410794 178 ntBASIC0.53□□□□□ -2.32
GTF2A1P52655 UBE2V1P10-201ENST00000414685 269 ntBASIC0.53□□□□□ -2.32
GTF2A1P52655 BX664727.1-201ENST00000416024 466 ntBASIC0.53□□□□□ -2.32
GTF2A1P52655 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.53□□□□□ -2.32
GTF2A1P52655 AC114482.1-201ENST00000418010 247 ntBASIC0.53□□□□□ -2.32
GTF2A1P52655 RPS26P5-201ENST00000418544 335 ntBASIC0.53□□□□□ -2.32
GTF2A1P52655 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.53□□□□□ -2.32
GTF2A1P52655 ZFAND6P1-201ENST00000434138 605 ntBASIC0.53□□□□□ -2.32
GTF2A1P52655 TIMM9P1-201ENST00000436122 256 ntBASIC0.53□□□□□ -2.32
GTF2A1P52655 AC005094.1-201ENST00000440420 368 ntBASIC0.53□□□□□ -2.32
GTF2A1P52655 RPL18AP17-201ENST00000455326 198 ntBASIC0.53□□□□□ -2.32
GTF2A1P52655 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC0.53□□□□□ -2.32
GTF2A1P52655 AC104563.1-201ENST00000476147 376 ntBASIC0.53□□□□□ -2.32
GTF2A1P52655 AC097473.1-201ENST00000508142 408 ntBASIC0.53□□□□□ -2.32
GTF2A1P52655 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
GTF2A1P52655 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.53□□□□□ -2.32
GTF2A1P52655 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC0.53□□□□□ -2.32
GTF2A1P52655 AC025678.1-201ENST00000567861 338 ntBASIC0.53□□□□□ -2.32
GTF2A1P52655 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.53□□□□□ -2.32
GTF2A1P52655 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.53□□□□□ -2.32
GTF2A1P52655 AC008751.2-201ENST00000597885 980 ntBASIC0.53□□□□□ -2.32
GTF2A1P52655 AC092656.1-203ENST00000624134 423 ntBASIC0.53□□□□□ -2.32
GTF2A1P52655 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
GTF2A1P52655 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.53□□□□□ -2.33
GTF2A1P52655 LINC02555-201ENST00000563933 1951 ntBASIC0.52□□□□□ -2.33
GTF2A1P52655 RNU6-744P-201ENST00000365557 107 ntBASIC0.52□□□□□ -2.33
GTF2A1P52655 RNU6-1316P-201ENST00000384242 108 ntBASIC0.52□□□□□ -2.33
GTF2A1P52655 MIR520A-201ENST00000384862 85 ntBASIC0.52□□□□□ -2.33
GTF2A1P52655 MIR605-201ENST00000385078 83 ntBASIC0.52□□□□□ -2.33
GTF2A1P52655 AC068533.2-201ENST00000411872 306 ntBASIC0.52□□□□□ -2.33
GTF2A1P52655 AC016831.2-201ENST00000417179 352 ntBASIC0.52□□□□□ -2.33
GTF2A1P52655 RAC1P6-201ENST00000423911 575 ntBASIC0.52□□□□□ -2.33
GTF2A1P52655 MTCO1P3-201ENST00000429327 192 ntBASIC0.52□□□□□ -2.33
GTF2A1P52655 CBX3P6-201ENST00000430257 527 ntBASIC0.52□□□□□ -2.33
GTF2A1P52655 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC0.52□□□□□ -2.33
GTF2A1P52655 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.52□□□□□ -2.33
GTF2A1P52655 AL606517.1-201ENST00000446914 387 ntBASIC0.52□□□□□ -2.33
GTF2A1P52655 AC012308.1-201ENST00000451232 178 ntBASIC0.52□□□□□ -2.33
GTF2A1P52655 RNU1-131P-201ENST00000458943 161 ntBASIC0.52□□□□□ -2.33
GTF2A1P52655 SNORD124-201ENST00000459577 104 ntBASIC0.52□□□□□ -2.33
GTF2A1P52655 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC0.52□□□□□ -2.33
GTF2A1P52655 AC090142.3-201ENST00000519012 385 ntBASIC0.52□□□□□ -2.33
GTF2A1P52655 AC004812.1-201ENST00000540773 146 ntBASIC0.52□□□□□ -2.33
GTF2A1P52655 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.52□□□□□ -2.33
GTF2A1P52655 AC137800.2-201ENST00000574375 120 ntBASIC0.52□□□□□ -2.33
GTF2A1P52655 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.52□□□□□ -2.33
GTF2A1P52655 MIR4524B-201ENST00000581569 115 ntBASIC0.52□□□□□ -2.33
GTF2A1P52655 OR4H6P-202ENST00000603819 340 ntBASIC0.52□□□□□ -2.33
GTF2A1P52655 AL590095.2-201ENST00000604136 117 ntBASIC0.52□□□□□ -2.33
GTF2A1P52655 snoU13.31-201ENST00000607291 104 ntBASIC0.52□□□□□ -2.33
GTF2A1P52655 AC009229.3-201ENST00000608056 282 ntBASIC0.52□□□□□ -2.33
GTF2A1P52655 AC123767.1-202ENST00000620407 817 ntBASIC0.52□□□□□ -2.33
GTF2A1P52655 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
GTF2A1P52655 snoU2_19.1-201ENST00000362361 80 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms