Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 RNU6-105P-201ENST00000363909 104 ntBASIC2.29□□□□□ -2.04
CDX1P47902 RNU6-82P-201ENST00000363970 107 ntBASIC2.29□□□□□ -2.04
CDX1P47902 SNORA9.2-201ENST00000365361 133 ntBASIC2.29□□□□□ -2.04
CDX1P47902 Y_RNA.378-201ENST00000365652 113 ntBASIC2.29□□□□□ -2.04
CDX1P47902 MIR181A1-201ENST00000385026 110 ntBASIC2.29□□□□□ -2.04
CDX1P47902 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CDX1P47902 RNU6-648P-201ENST00000410190 107 ntBASIC2.29□□□□□ -2.04
CDX1P47902 RNU6-1068P-201ENST00000410958 103 ntBASIC2.29□□□□□ -2.04
CDX1P47902 USP9YP27-201ENST00000418455 438 ntBASIC2.29□□□□□ -2.04
CDX1P47902 ARL5AP1-201ENST00000418991 388 ntBASIC2.29□□□□□ -2.04
CDX1P47902 AC008267.5-201ENST00000424928 265 ntBASIC2.29□□□□□ -2.04
CDX1P47902 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.29□□□□□ -2.04
CDX1P47902 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.29□□□□□ -2.04
CDX1P47902 AL161788.1-201ENST00000441805 169 ntBASIC2.29□□□□□ -2.04
CDX1P47902 AK3P2-201ENST00000507976 429 ntBASIC2.29□□□□□ -2.04
CDX1P47902 AC008526.1-201ENST00000509149 338 ntBASIC2.29□□□□□ -2.04
CDX1P47902 SCGB1D5P-201ENST00000515134 247 ntBASIC2.29□□□□□ -2.04
CDX1P47902 SNORA14.1-201ENST00000516113 141 ntBASIC2.29□□□□□ -2.04
CDX1P47902 SNORD60.2-201ENST00000516883 86 ntBASIC2.29□□□□□ -2.04
CDX1P47902 RNA5SP402-201ENST00000517148 110 ntBASIC2.29□□□□□ -2.04
CDX1P47902 CKS1BP7-201ENST00000522230 235 ntBASIC2.29□□□□□ -2.04
CDX1P47902 CBX3P7-201ENST00000532876 502 ntBASIC2.29□□□□□ -2.04
CDX1P47902 AC016957.1-201ENST00000534895 309 ntBASIC2.29□□□□□ -2.04
CDX1P47902 AK6P1-201ENST00000540219 478 ntBASIC2.29□□□□□ -2.04
CDX1P47902 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.29□□□□□ -2.04
CDX1P47902 AL138976.2-201ENST00000563989 694 ntBASIC2.29□□□□□ -2.04
CDX1P47902 EIF1P4-201ENST00000572664 335 ntBASIC2.29□□□□□ -2.04
CDX1P47902 AL670379.2-201ENST00000604983 252 ntBASIC2.29□□□□□ -2.04
CDX1P47902 DISC2.1-201ENST00000612827 205 ntBASIC2.29□□□□□ -2.04
CDX1P47902 AC009233.1-201ENST00000616477 371 ntBASIC2.29□□□□□ -2.04
CDX1P47902 AL137790.1-201ENST00000634283 177 ntBASIC2.29□□□□□ -2.04
CDX1P47902 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CDX1P47902 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CDX1P47902 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
CDX1P47902 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.28□□□□□ -2.04
CDX1P47902 AL355596.1-201ENST00000565399 3996 ntBASIC2.28□□□□□ -2.04
CDX1P47902 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CDX1P47902 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.28□□□□□ -2.04
CDX1P47902 U3.13-201ENST00000364804 214 ntBASIC2.28□□□□□ -2.04
CDX1P47902 RNU6-827P-201ENST00000365553 106 ntBASIC2.28□□□□□ -2.04
CDX1P47902 MIR181A2-201ENST00000384863 110 ntBASIC2.28□□□□□ -2.04
CDX1P47902 RNU6-1106P-201ENST00000390845 107 ntBASIC2.28□□□□□ -2.04
CDX1P47902 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.28□□□□□ -2.04
CDX1P47902 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.28□□□□□ -2.04
CDX1P47902 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.28□□□□□ -2.04
CDX1P47902 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CDX1P47902 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.28□□□□□ -2.04
CDX1P47902 AC007969.2-201ENST00000441891 191 ntBASIC2.28□□□□□ -2.04
CDX1P47902 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CDX1P47902 SNRPGP7-201ENST00000469016 106 ntBASIC2.28□□□□□ -2.04
CDX1P47902 AC087884.1-201ENST00000469738 328 ntBASIC2.28□□□□□ -2.04
CDX1P47902 AC117503.1-201ENST00000472241 394 ntBASIC2.28□□□□□ -2.04
CDX1P47902 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.28□□□□□ -2.04
CDX1P47902 AP005902.1-201ENST00000521358 186 ntBASIC2.28□□□□□ -2.04
CDX1P47902 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CDX1P47902 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.28□□□□□ -2.04
CDX1P47902 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
CDX1P47902 AC008121.3-201ENST00000618726 433 ntBASIC2.28□□□□□ -2.04
CDX1P47902 AC007318.2-201ENST00000620999 243 ntBASIC2.28□□□□□ -2.04
CDX1P47902 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
CDX1P47902 RNU1-72P-201ENST00000362976 153 ntBASIC2.27□□□□□ -2.05
CDX1P47902 Y_RNA.111-201ENST00000363248 100 ntBASIC2.27□□□□□ -2.05
CDX1P47902 RNU6-336P-201ENST00000364891 107 ntBASIC2.27□□□□□ -2.05
CDX1P47902 RNU4-20P-201ENST00000365601 151 ntBASIC2.27□□□□□ -2.05
CDX1P47902 RNU6-1032P-201ENST00000384100 107 ntBASIC2.27□□□□□ -2.05
CDX1P47902 RNU6-1215P-201ENST00000384441 102 ntBASIC2.27□□□□□ -2.05
CDX1P47902 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.27□□□□□ -2.05
CDX1P47902 SUMO1P4-201ENST00000429430 302 ntBASIC2.27□□□□□ -2.05
CDX1P47902 AL139132.1-201ENST00000431587 344 ntBASIC2.27□□□□□ -2.05
CDX1P47902 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.27□□□□□ -2.05
CDX1P47902 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.27□□□□□ -2.05
CDX1P47902 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.27□□□□□ -2.05
CDX1P47902 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.27□□□□□ -2.05
CDX1P47902 RNU7-138P-201ENST00000459479 64 ntBASIC2.27□□□□□ -2.05
CDX1P47902 Y_RNA.654-201ENST00000497848 106 ntBASIC2.27□□□□□ -2.05
CDX1P47902 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.27□□□□□ -2.05
CDX1P47902 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.27□□□□□ -2.05
CDX1P47902 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.27□□□□□ -2.05
CDX1P47902 RNA5SP367-201ENST00000516557 118 ntBASIC2.27□□□□□ -2.05
CDX1P47902 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.27□□□□□ -2.05
CDX1P47902 AL157687.1-201ENST00000554853 619 ntBASIC2.27□□□□□ -2.05
CDX1P47902 AC103996.1-201ENST00000555468 102 ntBASIC2.27□□□□□ -2.05
CDX1P47902 AL118558.2-201ENST00000556294 238 ntBASIC2.27□□□□□ -2.05
CDX1P47902 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.27□□□□□ -2.05
CDX1P47902 MIR5194-201ENST00000582634 120 ntBASIC2.27□□□□□ -2.05
CDX1P47902 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.27□□□□□ -2.05
CDX1P47902 ELOCP29-201ENST00000588193 334 ntBASIC2.27□□□□□ -2.05
CDX1P47902 AL713866.2-201ENST00000603579 219 ntBASIC2.27□□□□□ -2.05
CDX1P47902 AC092807.2-201ENST00000609367 243 ntBASIC2.27□□□□□ -2.05
CDX1P47902 AC090115.4-201ENST00000609970 188 ntBASIC2.27□□□□□ -2.05
CDX1P47902 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.27□□□□□ -2.05
CDX1P47902 MIR7106-201ENST00000612419 65 ntBASIC2.27□□□□□ -2.05
CDX1P47902 AC103705.1-201ENST00000619013 241 ntBASIC2.27□□□□□ -2.05
CDX1P47902 AC006386.2-201ENST00000624491 75 ntBASIC2.27□□□□□ -2.05
CDX1P47902 AC012005.1-201ENST00000624575 75 ntBASIC2.27□□□□□ -2.05
CDX1P47902 AC090517.3-201ENST00000625170 141 ntBASIC2.27□□□□□ -2.05
CDX1P47902 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.27□□□□□ -2.05
CDX1P47902 SCARNA15.3-201ENST00000626315 122 ntBASIC2.27□□□□□ -2.05
CDX1P47902 SCARNA4.1-201ENST00000628597 123 ntBASIC2.27□□□□□ -2.05
CDX1P47902 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms