Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 RNU6-339P-201ENST00000384310 107 ntBASIC3.44□□□□□ -1.86
COL11A2P13942 MIR1252-201ENST00000408861 65 ntBASIC3.44□□□□□ -1.86
COL11A2P13942 RPS12P23-201ENST00000419579 400 ntBASIC3.44□□□□□ -1.86
COL11A2P13942 ELOCP20-201ENST00000422460 345 ntBASIC3.44□□□□□ -1.86
COL11A2P13942 BX276092.3-201ENST00000424182 230 ntBASIC3.44□□□□□ -1.86
COL11A2P13942 HMGB3P8-201ENST00000449709 577 ntBASIC3.44□□□□□ -1.86
COL11A2P13942 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.44□□□□□ -1.86
COL11A2P13942 RPL23AP31-201ENST00000456160 467 ntBASIC3.44□□□□□ -1.86
COL11A2P13942 AC112492.4-201ENST00000456549 352 ntBASIC3.44□□□□□ -1.86
COL11A2P13942 RPL21P41-201ENST00000459863 264 ntBASIC3.44□□□□□ -1.86
COL11A2P13942 AC025465.3-201ENST00000510570 311 ntBASIC3.44□□□□□ -1.86
COL11A2P13942 RNU6-390P-201ENST00000516259 103 ntBASIC3.44□□□□□ -1.86
COL11A2P13942 Y_RNA.680-201ENST00000516441 93 ntBASIC3.44□□□□□ -1.86
COL11A2P13942 AC040926.1-201ENST00000530195 238 ntBASIC3.44□□□□□ -1.86
COL11A2P13942 SNRPGP16-201ENST00000533275 226 ntBASIC3.44□□□□□ -1.86
COL11A2P13942 AC025423.5-201ENST00000550230 219 ntBASIC3.44□□□□□ -1.86
COL11A2P13942 AC110741.2-201ENST00000605278 268 ntBASIC3.44□□□□□ -1.86
COL11A2P13942 HMGN2P28-201ENST00000606102 262 ntBASIC3.44□□□□□ -1.86
COL11A2P13942 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
COL11A2P13942 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.44□□□□□ -1.86
COL11A2P13942 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.43□□□□□ -1.86
COL11A2P13942 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
COL11A2P13942 AC138393.1-203ENST00000327086 343 ntBASIC3.43□□□□□ -1.86
COL11A2P13942 RNA5SP68-201ENST00000363885 119 ntBASIC3.43□□□□□ -1.86
COL11A2P13942 RNU6-1329P-201ENST00000365664 107 ntBASIC3.43□□□□□ -1.86
COL11A2P13942 RNU6-209P-201ENST00000384118 107 ntBASIC3.43□□□□□ -1.86
COL11A2P13942 Y_RNA.551-201ENST00000384661 102 ntBASIC3.43□□□□□ -1.86
COL11A2P13942 SNORD73A-201ENST00000386062 65 ntBASIC3.43□□□□□ -1.86
COL11A2P13942 MT-TW-201ENST00000387382 68 ntBASIC3.43□□□□□ -1.86
COL11A2P13942 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.43□□□□□ -1.86
COL11A2P13942 AC139712.2-201ENST00000424302 339 ntBASIC3.43□□□□□ -1.86
COL11A2P13942 UBE2D3P2-201ENST00000424409 445 ntBASIC3.43□□□□□ -1.86
COL11A2P13942 FTH1P6-201ENST00000430768 320 ntBASIC3.43□□□□□ -1.86
COL11A2P13942 SUMO1P2-201ENST00000452524 304 ntBASIC3.43□□□□□ -1.86
COL11A2P13942 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.43□□□□□ -1.86
COL11A2P13942 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.43□□□□□ -1.86
COL11A2P13942 AC104027.1-201ENST00000521887 300 ntBASIC3.43□□□□□ -1.86
COL11A2P13942 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC3.43□□□□□ -1.86
COL11A2P13942 ERHP1-201ENST00000523006 310 ntBASIC3.43□□□□□ -1.86
COL11A2P13942 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.43□□□□□ -1.86
COL11A2P13942 AC007375.1-201ENST00000554513 578 ntBASIC3.43□□□□□ -1.86
COL11A2P13942 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
COL11A2P13942 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
COL11A2P13942 UBE2L2-201ENST00000254302 429 ntBASIC3.42□□□□□ -1.86
COL11A2P13942 Y_RNA.14-201ENST00000362415 103 ntBASIC3.42□□□□□ -1.86
COL11A2P13942 RNU6-1249P-201ENST00000363237 111 ntBASIC3.42□□□□□ -1.86
COL11A2P13942 Y_RNA.552-201ENST00000384665 112 ntBASIC3.42□□□□□ -1.86
COL11A2P13942 MIR548M-201ENST00000408260 86 ntBASIC3.42□□□□□ -1.86
COL11A2P13942 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.42□□□□□ -1.86
COL11A2P13942 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.42□□□□□ -1.86
COL11A2P13942 OR2AQ1P-201ENST00000451972 200 ntBASIC3.42□□□□□ -1.86
COL11A2P13942 MTND3P25-201ENST00000509243 135 ntBASIC3.42□□□□□ -1.86
COL11A2P13942 RNU6-677P-201ENST00000516914 101 ntBASIC3.42□□□□□ -1.86
COL11A2P13942 AC104576.1-201ENST00000524225 88 ntBASIC3.42□□□□□ -1.86
COL11A2P13942 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.42□□□□□ -1.86
COL11A2P13942 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
COL11A2P13942 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
COL11A2P13942 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.42□□□□□ -1.86
COL11A2P13942 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
COL11A2P13942 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
COL11A2P13942 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.42□□□□□ -1.86
COL11A2P13942 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
COL11A2P13942 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.42□□□□□ -1.86
COL11A2P13942 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.42□□□□□ -1.86
COL11A2P13942 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.42□□□□□ -1.86
COL11A2P13942 Y_RNA.26-201ENST00000362539 101 ntBASIC3.41□□□□□ -1.86
COL11A2P13942 SNORD56.3-201ENST00000363507 71 ntBASIC3.41□□□□□ -1.86
COL11A2P13942 RNU6-806P-201ENST00000365147 105 ntBASIC3.41□□□□□ -1.86
COL11A2P13942 RNU6-306P-201ENST00000384617 107 ntBASIC3.41□□□□□ -1.86
COL11A2P13942 MIR625-201ENST00000385047 85 ntBASIC3.41□□□□□ -1.86
COL11A2P13942 RNA5SP293-201ENST00000410527 113 ntBASIC3.41□□□□□ -1.86
COL11A2P13942 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.41□□□□□ -1.86
COL11A2P13942 RPS15AP34-201ENST00000487776 387 ntBASIC3.41□□□□□ -1.86
COL11A2P13942 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.41□□□□□ -1.86
COL11A2P13942 SNORA31.3-201ENST00000516029 96 ntBASIC3.41□□□□□ -1.86
COL11A2P13942 RNU6-1095P-201ENST00000516148 108 ntBASIC3.41□□□□□ -1.86
COL11A2P13942 RNA5SP320-201ENST00000516263 124 ntBASIC3.41□□□□□ -1.86
COL11A2P13942 IGHV3-76-201ENST00000522465 295 ntBASIC3.41□□□□□ -1.86
COL11A2P13942 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.41□□□□□ -1.86
COL11A2P13942 AC107918.3-201ENST00000533272 382 ntBASIC3.41□□□□□ -1.86
COL11A2P13942 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC3.41□□□□□ -1.86
COL11A2P13942 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.41□□□□□ -1.86
COL11A2P13942 MIR4716-201ENST00000579628 84 ntBASIC3.41□□□□□ -1.86
COL11A2P13942 MIR3128-201ENST00000581957 66 ntBASIC3.41□□□□□ -1.86
COL11A2P13942 AC078938.1-201ENST00000620993 318 ntBASIC3.41□□□□□ -1.86
COL11A2P13942 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL11A2P13942 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
COL11A2P13942 AP006437.1-201ENST00000641440 3685 ntBASIC3.41□□□□□ -1.86
COL11A2P13942 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL11A2P13942 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
COL11A2P13942 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.41□□□□□ -1.86
COL11A2P13942 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.41□□□□□ -1.86
COL11A2P13942 Y_RNA.288-201ENST00000364854 92 ntBASIC3.41□□□□□ -1.86
COL11A2P13942 Y_RNA.324-201ENST00000365165 102 ntBASIC3.41□□□□□ -1.86
COL11A2P13942 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
COL11A2P13942 AL030996.1-201ENST00000411430 235 ntBASIC3.41□□□□□ -1.86
COL11A2P13942 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.41□□□□□ -1.86
COL11A2P13942 HMGB1P27-201ENST00000431429 603 ntBASIC3.41□□□□□ -1.86
COL11A2P13942 AC004383.1-201ENST00000438135 289 ntBASIC3.41□□□□□ -1.86
COL11A2P13942 SUMO1P3-201ENST00000439961 304 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms