Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.72□□□□□ -2.29
FREM3P0C091 AC005094.1-201ENST00000440420 368 ntBASIC0.72□□□□□ -2.29
FREM3P0C091 RPL39P29-201ENST00000447779 157 ntBASIC0.72□□□□□ -2.29
FREM3P0C091 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.72□□□□□ -2.29
FREM3P0C091 UBL5P1-201ENST00000507979 193 ntBASIC0.72□□□□□ -2.29
FREM3P0C091 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.72□□□□□ -2.29
FREM3P0C091 TRAV32-201ENST00000553993 340 ntBASIC0.72□□□□□ -2.29
FREM3P0C091 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.71□□□□□ -2.29
FREM3P0C091 RNA5SP257-201ENST00000363023 116 ntBASIC0.71□□□□□ -2.3
FREM3P0C091 Y_RNA.251-201ENST00000364551 99 ntBASIC0.71□□□□□ -2.3
FREM3P0C091 RNU6-716P-201ENST00000365621 103 ntBASIC0.71□□□□□ -2.3
FREM3P0C091 AL355994.1-201ENST00000424379 260 ntBASIC0.71□□□□□ -2.3
FREM3P0C091 AL591704.1-201ENST00000432574 275 ntBASIC0.71□□□□□ -2.3
FREM3P0C091 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC0.71□□□□□ -2.3
FREM3P0C091 MTND5P14-201ENST00000441481 1267 ntBASIC0.71□□□□□ -2.3
FREM3P0C091 PAXBP1P1-201ENST00000449315 447 ntBASIC0.71□□□□□ -2.3
FREM3P0C091 AC021451.1-201ENST00000523498 1129 ntBASIC0.71□□□□□ -2.3
FREM3P0C091 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.71□□□□□ -2.3
FREM3P0C091 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.71□□□□□ -2.3
FREM3P0C091 AC093012.1-202ENST00000549403 582 ntBASIC0.71□□□□□ -2.3
FREM3P0C091 AC098483.2-201ENST00000603158 454 ntBASIC0.71□□□□□ -2.3
FREM3P0C091 AC004987.4-201ENST00000603383 338 ntBASIC0.71□□□□□ -2.3
FREM3P0C091 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
FREM3P0C091 RNU6-942P-201ENST00000363002 107 ntBASIC0.71□□□□□ -2.3
FREM3P0C091 SNORD114-19-201ENST00000363072 75 ntBASIC0.71□□□□□ -2.3
FREM3P0C091 RNA5SP493-201ENST00000364115 91 ntBASIC0.71□□□□□ -2.3
FREM3P0C091 RNU6-188P-201ENST00000364207 107 ntBASIC0.71□□□□□ -2.3
FREM3P0C091 SNORD116-20-201ENST00000384529 92 ntBASIC0.71□□□□□ -2.3
FREM3P0C091 MIR186-201ENST00000384988 86 ntBASIC0.71□□□□□ -2.3
FREM3P0C091 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
FREM3P0C091 AC119751.3-201ENST00000399720 670 ntBASIC0.71□□□□□ -2.3
FREM3P0C091 RNU2-23P-201ENST00000410545 195 ntBASIC0.71□□□□□ -2.3
FREM3P0C091 MRPL35P3-201ENST00000421557 364 ntBASIC0.71□□□□□ -2.3
FREM3P0C091 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.71□□□□□ -2.3
FREM3P0C091 RSL24D1P8-201ENST00000434442 492 ntBASIC0.71□□□□□ -2.3
FREM3P0C091 MTND4P25-201ENST00000441039 533 ntBASIC0.71□□□□□ -2.3
FREM3P0C091 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.71□□□□□ -2.3
FREM3P0C091 DUXAP8-207ENST00000456786 622 ntBASIC0.71□□□□□ -2.3
FREM3P0C091 RNA5SP269-201ENST00000459032 137 ntBASIC0.71□□□□□ -2.3
FREM3P0C091 RNU2-53P-201ENST00000516257 147 ntBASIC0.71□□□□□ -2.3
FREM3P0C091 RNU6-143P-201ENST00000516942 93 ntBASIC0.71□□□□□ -2.3
FREM3P0C091 RNU6-1315P-201ENST00000517187 99 ntBASIC0.71□□□□□ -2.3
FREM3P0C091 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.71□□□□□ -2.3
FREM3P0C091 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.71□□□□□ -2.3
FREM3P0C091 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC0.71□□□□□ -2.3
FREM3P0C091 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.71□□□□□ -2.3
FREM3P0C091 AC090115.3-201ENST00000553218 849 ntBASIC0.71□□□□□ -2.3
FREM3P0C091 AC012467.1-201ENST00000607740 256 ntBASIC0.71□□□□□ -2.3
FREM3P0C091 PCMTD1P7-201ENST00000634506 357 ntBASIC0.71□□□□□ -2.3
FREM3P0C091 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.71□□□□□ -2.3
FREM3P0C091 RNU6-271P-201ENST00000363858 105 ntBASIC0.7□□□□□ -2.3
FREM3P0C091 SNORD1A-201ENST00000364968 72 ntBASIC0.7□□□□□ -2.3
FREM3P0C091 MIR29B2-201ENST00000385055 81 ntBASIC0.7□□□□□ -2.3
FREM3P0C091 AL357139.1-201ENST00000407792 426 ntBASIC0.7□□□□□ -2.3
FREM3P0C091 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.7□□□□□ -2.3
FREM3P0C091 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.7□□□□□ -2.3
FREM3P0C091 EEF1E1P1-201ENST00000446998 430 ntBASIC0.7□□□□□ -2.3
FREM3P0C091 AC027338.1-201ENST00000514840 825 ntBASIC0.7□□□□□ -2.3
FREM3P0C091 AC126365.2-201ENST00000580630 379 ntBASIC0.7□□□□□ -2.3
FREM3P0C091 AC243829.6-201ENST00000612652 106 ntBASIC0.7□□□□□ -2.3
FREM3P0C091 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.7□□□□□ -2.3
FREM3P0C091 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
FREM3P0C091 RNU6-1284P-201ENST00000363701 100 ntBASIC0.7□□□□□ -2.3
FREM3P0C091 RNU6-207P-201ENST00000384137 107 ntBASIC0.7□□□□□ -2.3
FREM3P0C091 RNU6-17P-201ENST00000384245 107 ntBASIC0.7□□□□□ -2.3
FREM3P0C091 RNU6-18P-201ENST00000384527 107 ntBASIC0.7□□□□□ -2.3
FREM3P0C091 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC0.7□□□□□ -2.3
FREM3P0C091 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.7□□□□□ -2.3
FREM3P0C091 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.7□□□□□ -2.3
FREM3P0C091 RPL30P6-201ENST00000475925 342 ntBASIC0.7□□□□□ -2.3
FREM3P0C091 RNU6-583P-201ENST00000516012 92 ntBASIC0.7□□□□□ -2.3
FREM3P0C091 AC104417.1-201ENST00000523974 751 ntBASIC0.7□□□□□ -2.3
FREM3P0C091 AL512605.2-201ENST00000592972 256 ntBASIC0.7□□□□□ -2.3
FREM3P0C091 RNU6-166P-201ENST00000384371 107 ntBASIC0.69□□□□□ -2.3
FREM3P0C091 AL359704.1-201ENST00000411586 781 ntBASIC0.69□□□□□ -2.3
FREM3P0C091 MTCO3P43-201ENST00000440974 771 ntBASIC0.69□□□□□ -2.3
FREM3P0C091 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC0.69□□□□□ -2.3
FREM3P0C091 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
FREM3P0C091 MTND1P16-201ENST00000465177 898 ntBASIC0.69□□□□□ -2.3
FREM3P0C091 HMGB1P30-201ENST00000492455 606 ntBASIC0.69□□□□□ -2.3
FREM3P0C091 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.69□□□□□ -2.3
FREM3P0C091 MTND2P33-201ENST00000506452 1031 ntBASIC0.69□□□□□ -2.3
FREM3P0C091 RNU7-40P-201ENST00000516397 64 ntBASIC0.69□□□□□ -2.3
FREM3P0C091 RNU6-902P-201ENST00000517212 91 ntBASIC0.69□□□□□ -2.3
FREM3P0C091 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.69□□□□□ -2.3
FREM3P0C091 RRN3P3-201ENST00000549207 578 ntBASIC0.69□□□□□ -2.3
FREM3P0C091 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.69□□□□□ -2.3
FREM3P0C091 DPPA3P3-201ENST00000603842 430 ntBASIC0.69□□□□□ -2.3
FREM3P0C091 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.69□□□□□ -2.3
FREM3P0C091 MIR216A-201ENST00000385063 110 ntBASIC0.68□□□□□ -2.3
FREM3P0C091 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
FREM3P0C091 RNU6-278P-201ENST00000390945 109 ntBASIC0.68□□□□□ -2.3
FREM3P0C091 RPL37P10-201ENST00000412884 288 ntBASIC0.68□□□□□ -2.3
FREM3P0C091 SNRPEP7-201ENST00000438350 220 ntBASIC0.68□□□□□ -2.3
FREM3P0C091 AL096829.2-201ENST00000446582 742 ntBASIC0.68□□□□□ -2.3
FREM3P0C091 AL353752.1-201ENST00000454946 260 ntBASIC0.68□□□□□ -2.3
FREM3P0C091 RPS26P55-201ENST00000471178 356 ntBASIC0.68□□□□□ -2.3
FREM3P0C091 AC025465.3-201ENST00000510570 311 ntBASIC0.68□□□□□ -2.3
FREM3P0C091 SNORA31.3-201ENST00000516029 96 ntBASIC0.68□□□□□ -2.3
FREM3P0C091 AC022784.5-201ENST00000522241 437 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms