Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC1.23□□□□□ -2.21
SGCEO43556 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.23□□□□□ -2.21
SGCEO43556 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.23□□□□□ -2.21
SGCEO43556 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.23□□□□□ -2.21
SGCEO43556 ZNF736P4Y-201ENST00000454995 1243 ntBASIC1.23□□□□□ -2.21
SGCEO43556 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.23□□□□□ -2.21
SGCEO43556 RPL31P58-201ENST00000469001 379 ntBASIC1.23□□□□□ -2.21
SGCEO43556 AC132942.1-201ENST00000486753 483 ntBASIC1.23□□□□□ -2.21
SGCEO43556 MTCYBP35-201ENST00000503630 1137 ntBASIC1.23□□□□□ -2.21
SGCEO43556 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.23□□□□□ -2.21
SGCEO43556 MTND2P33-201ENST00000506452 1031 ntBASIC1.23□□□□□ -2.21
SGCEO43556 SNORA43.2-201ENST00000516652 128 ntBASIC1.23□□□□□ -2.21
SGCEO43556 SNORA31.17-201ENST00000516953 127 ntBASIC1.23□□□□□ -2.21
SGCEO43556 RNU6-201P-201ENST00000517100 61 ntBASIC1.23□□□□□ -2.21
SGCEO43556 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.23□□□□□ -2.21
SGCEO43556 MIR3169-201ENST00000578032 83 ntBASIC1.23□□□□□ -2.21
SGCEO43556 AC009977.1-201ENST00000586015 570 ntBASIC1.23□□□□□ -2.21
SGCEO43556 AC005786.1-201ENST00000588553 154 ntBASIC1.23□□□□□ -2.21
SGCEO43556 AC022022.2-201ENST00000602989 360 ntBASIC1.23□□□□□ -2.21
SGCEO43556 AP000654.2-201ENST00000605633 586 ntBASIC1.23□□□□□ -2.21
SGCEO43556 AC080013.3-201ENST00000606839 578 ntBASIC1.23□□□□□ -2.21
SGCEO43556 AC006338.1-201ENST00000618453 749 ntBASIC1.23□□□□□ -2.21
SGCEO43556 AL159153.1-201ENST00000619688 317 ntBASIC1.23□□□□□ -2.21
SGCEO43556 UGP2-231ENST00000627474 264 ntTSL 5 BASIC1.23□□□□□ -2.21
SGCEO43556 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.23□□□□□ -2.21
SGCEO43556 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.23□□□□□ -2.21
SGCEO43556 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.22□□□□□ -2.21
SGCEO43556 ZNF29P-201ENST00000225587 168 ntBASIC1.22□□□□□ -2.21
SGCEO43556 RNU6-414P-201ENST00000363705 104 ntBASIC1.22□□□□□ -2.21
SGCEO43556 AL353777.1-201ENST00000425552 326 ntBASIC1.22□□□□□ -2.21
SGCEO43556 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.22□□□□□ -2.21
SGCEO43556 AC087477.1-201ENST00000465747 340 ntBASIC1.22□□□□□ -2.21
SGCEO43556 AC010409.1-201ENST00000487382 476 ntBASIC1.22□□□□□ -2.21
SGCEO43556 AC112206.3-201ENST00000514578 389 ntBASIC1.22□□□□□ -2.21
SGCEO43556 Y_RNA.687-201ENST00000516558 91 ntBASIC1.22□□□□□ -2.21
SGCEO43556 RNU6-1003P-201ENST00000517099 105 ntBASIC1.22□□□□□ -2.21
SGCEO43556 RNU6-902P-201ENST00000517212 91 ntBASIC1.22□□□□□ -2.21
SGCEO43556 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.22□□□□□ -2.21
SGCEO43556 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.22□□□□□ -2.21
SGCEO43556 MIR4303-201ENST00000581299 66 ntBASIC1.22□□□□□ -2.21
SGCEO43556 MIR4307-201ENST00000582802 84 ntBASIC1.22□□□□□ -2.21
SGCEO43556 AC121334.2-201ENST00000605387 271 ntBASIC1.22□□□□□ -2.21
SGCEO43556 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC1.22□□□□□ -2.21
SGCEO43556 AC097478.2-201ENST00000610572 514 ntBASIC1.22□□□□□ -2.21
SGCEO43556 AC063943.3-201ENST00000615562 356 ntBASIC1.22□□□□□ -2.21
SGCEO43556 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.22□□□□□ -2.21
SGCEO43556 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.21□□□□□ -2.22
SGCEO43556 SNORD26-201ENST00000384147 75 ntBASIC1.21□□□□□ -2.22
SGCEO43556 AL357139.1-201ENST00000407792 426 ntBASIC1.21□□□□□ -2.22
SGCEO43556 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.21□□□□□ -2.22
SGCEO43556 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.21□□□□□ -2.22
SGCEO43556 AC099513.1-201ENST00000490423 301 ntBASIC1.21□□□□□ -2.22
SGCEO43556 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.21□□□□□ -2.22
SGCEO43556 HMGN1P13-201ENST00000505795 138 ntBASIC1.21□□□□□ -2.22
SGCEO43556 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.21□□□□□ -2.22
SGCEO43556 RNA5SP445-201ENST00000515889 115 ntBASIC1.21□□□□□ -2.22
SGCEO43556 RNA5SP61-201ENST00000516453 100 ntBASIC1.21□□□□□ -2.22
SGCEO43556 RNU1-92P-201ENST00000517017 135 ntBASIC1.21□□□□□ -2.22
SGCEO43556 AP003122.4-201ENST00000530980 758 ntBASIC1.21□□□□□ -2.22
SGCEO43556 AC015712.3-201ENST00000559380 164 ntBASIC1.21□□□□□ -2.22
SGCEO43556 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.21□□□□□ -2.22
SGCEO43556 MIR548AC-201ENST00000585049 88 ntBASIC1.21□□□□□ -2.22
SGCEO43556 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.21□□□□□ -2.22
SGCEO43556 AL391813.2-201ENST00000609113 322 ntBASIC1.21□□□□□ -2.22
SGCEO43556 AC108747.1-201ENST00000609508 535 ntBASIC1.21□□□□□ -2.22
SGCEO43556 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
SGCEO43556 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
SGCEO43556 ZNF209P-201ENST00000593450 2304 ntBASIC1.2□□□□□ -2.22
SGCEO43556 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.2□□□□□ -2.22
SGCEO43556 AC073343.1-201ENST00000328239 651 ntBASIC1.2□□□□□ -2.22
SGCEO43556 SNORD56.1-201ENST00000362913 68 ntBASIC1.2□□□□□ -2.22
SGCEO43556 RNU4-92P-201ENST00000363783 136 ntBASIC1.2□□□□□ -2.22
SGCEO43556 RNU6-457P-201ENST00000363999 107 ntBASIC1.2□□□□□ -2.22
SGCEO43556 SNORA62.1-201ENST00000364287 154 ntBASIC1.2□□□□□ -2.22
SGCEO43556 RNU4-68P-201ENST00000364314 141 ntBASIC1.2□□□□□ -2.22
SGCEO43556 RNA5SP213-201ENST00000391031 106 ntBASIC1.2□□□□□ -2.22
SGCEO43556 RPS3AP36-201ENST00000398190 775 ntBASIC1.2□□□□□ -2.22
SGCEO43556 MIR1267-201ENST00000408723 78 ntBASIC1.2□□□□□ -2.22
SGCEO43556 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.2□□□□□ -2.22
SGCEO43556 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.2□□□□□ -2.22
SGCEO43556 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.2□□□□□ -2.22
SGCEO43556 RPL30P12-201ENST00000474666 353 ntBASIC1.2□□□□□ -2.22
SGCEO43556 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.2□□□□□ -2.22
SGCEO43556 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.2□□□□□ -2.22
SGCEO43556 RNU7-51P-201ENST00000516560 62 ntBASIC1.2□□□□□ -2.22
SGCEO43556 AC087441.2-201ENST00000529141 262 ntBASIC1.2□□□□□ -2.22
SGCEO43556 AP003034.1-201ENST00000534621 422 ntBASIC1.2□□□□□ -2.22
SGCEO43556 AC123904.2-201ENST00000548059 300 ntBASIC1.2□□□□□ -2.22
SGCEO43556 BNIP3P6-201ENST00000549284 499 ntBASIC1.2□□□□□ -2.22
SGCEO43556 AL161670.1-201ENST00000554348 137 ntBASIC1.2□□□□□ -2.22
SGCEO43556 AL136363.2-201ENST00000604173 851 ntBASIC1.2□□□□□ -2.22
SGCEO43556 AC025754.2-201ENST00000606491 432 ntBASIC1.2□□□□□ -2.22
SGCEO43556 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.2□□□□□ -2.22
SGCEO43556 AC021755.4-201ENST00000616620 456 ntBASIC1.2□□□□□ -2.22
SGCEO43556 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.2□□□□□ -2.22
SGCEO43556 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.2□□□□□ -2.22
SGCEO43556 RNU6-271P-201ENST00000363858 105 ntBASIC1.19□□□□□ -2.22
SGCEO43556 RNU6-203P-201ENST00000384038 104 ntBASIC1.19□□□□□ -2.22
SGCEO43556 U8.10-201ENST00000384260 133 ntBASIC1.19□□□□□ -2.22
SGCEO43556 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms