Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 RNU6-1001P-201ENST00000411265 100 ntBASIC3.73□□□□□ -1.81
SHOXO15266 AC140479.3-201ENST00000418944 1126 ntBASIC3.73□□□□□ -1.81
SHOXO15266 AC245291.1-201ENST00000419501 328 ntBASIC3.73□□□□□ -1.81
SHOXO15266 AC012306.1-201ENST00000423267 114 ntBASIC3.73□□□□□ -1.81
SHOXO15266 PTGES3P4-201ENST00000426243 356 ntBASIC3.73□□□□□ -1.81
SHOXO15266 snoU13.28-201ENST00000459235 104 ntBASIC3.73□□□□□ -1.81
SHOXO15266 RN7SL93P-201ENST00000463035 293 ntBASIC3.73□□□□□ -1.81
SHOXO15266 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.73□□□□□ -1.81
SHOXO15266 RNU7-110P-201ENST00000516891 62 ntBASIC3.73□□□□□ -1.81
SHOXO15266 CYCSP23-201ENST00000519781 313 ntBASIC3.73□□□□□ -1.81
SHOXO15266 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC3.73□□□□□ -1.81
SHOXO15266 AC105137.2-201ENST00000569073 466 ntBASIC3.73□□□□□ -1.81
SHOXO15266 HMGN2P15-201ENST00000585707 270 ntBASIC3.73□□□□□ -1.81
SHOXO15266 AC010201.1-201ENST00000605051 540 ntBASIC3.73□□□□□ -1.81
SHOXO15266 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.73□□□□□ -1.81
SHOXO15266 AC127459.3-201ENST00000624328 466 ntBASIC3.73□□□□□ -1.81
SHOXO15266 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SHOXO15266 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SHOXO15266 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.73□□□□□ -1.81
SHOXO15266 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.73□□□□□ -1.81
SHOXO15266 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.73□□□□□ -1.81
SHOXO15266 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SHOXO15266 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SHOXO15266 SDAD1P1-202ENST00000524156 2051 ntBASIC3.72□□□□□ -1.81
SHOXO15266 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.72□□□□□ -1.81
SHOXO15266 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
SHOXO15266 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
SHOXO15266 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
SHOXO15266 RNU6-1285P-201ENST00000363480 105 ntBASIC3.72□□□□□ -1.81
SHOXO15266 RNU6-514P-201ENST00000384208 107 ntBASIC3.72□□□□□ -1.81
SHOXO15266 SNORA36A-201ENST00000384221 132 ntBASIC3.72□□□□□ -1.81
SHOXO15266 RNU6-102P-201ENST00000384485 104 ntBASIC3.72□□□□□ -1.81
SHOXO15266 RNU6-748P-201ENST00000384648 107 ntBASIC3.72□□□□□ -1.81
SHOXO15266 EI24P2-201ENST00000397776 1076 ntBASIC3.72□□□□□ -1.81
SHOXO15266 HLFP1-201ENST00000402375 499 ntBASIC3.72□□□□□ -1.81
SHOXO15266 MIR320B2-201ENST00000408479 138 ntBASIC3.72□□□□□ -1.81
SHOXO15266 SNORA3C-201ENST00000408792 125 ntBASIC3.72□□□□□ -1.81
SHOXO15266 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.72□□□□□ -1.81
SHOXO15266 AL591419.1-201ENST00000427423 339 ntBASIC3.72□□□□□ -1.81
SHOXO15266 NUTF2P3-201ENST00000448540 384 ntBASIC3.72□□□□□ -1.81
SHOXO15266 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.72□□□□□ -1.81
SHOXO15266 HSPE1P25-201ENST00000455484 251 ntBASIC3.72□□□□□ -1.81
SHOXO15266 PRELID3BP1-201ENST00000457142 540 ntBASIC3.72□□□□□ -1.81
SHOXO15266 RN7SL738P-201ENST00000470264 297 ntBASIC3.72□□□□□ -1.81
SHOXO15266 RPS29P22-201ENST00000472363 168 ntBASIC3.72□□□□□ -1.81
SHOXO15266 RPL30P12-201ENST00000474666 353 ntBASIC3.72□□□□□ -1.81
SHOXO15266 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.72□□□□□ -1.81
SHOXO15266 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC3.72□□□□□ -1.81
SHOXO15266 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.72□□□□□ -1.81
SHOXO15266 RNU2-31P-201ENST00000516954 155 ntBASIC3.72□□□□□ -1.81
SHOXO15266 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.72□□□□□ -1.81
SHOXO15266 UBL5P4-201ENST00000562584 236 ntBASIC3.72□□□□□ -1.81
SHOXO15266 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.72□□□□□ -1.81
SHOXO15266 MIR4697-201ENST00000582977 78 ntBASIC3.72□□□□□ -1.81
SHOXO15266 MIR3136-201ENST00000583498 78 ntBASIC3.72□□□□□ -1.81
SHOXO15266 AC024220.1-201ENST00000603675 484 ntBASIC3.72□□□□□ -1.81
SHOXO15266 HSPE1P7-201ENST00000604681 321 ntBASIC3.72□□□□□ -1.81
SHOXO15266 BRDTP1-201ENST00000605735 677 ntBASIC3.72□□□□□ -1.81
SHOXO15266 AL138880.2-201ENST00000616214 239 ntBASIC3.72□□□□□ -1.81
SHOXO15266 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.72□□□□□ -1.81
SHOXO15266 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.72□□□□□ -1.81
SHOXO15266 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
SHOXO15266 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
SHOXO15266 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.71□□□□□ -1.82
SHOXO15266 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.71□□□□□ -1.82
SHOXO15266 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
SHOXO15266 Y_RNA.44-201ENST00000362676 108 ntBASIC3.71□□□□□ -1.82
SHOXO15266 RNU6-19P-201ENST00000384718 107 ntBASIC3.71□□□□□ -1.82
SHOXO15266 MIR1298-201ENST00000408783 112 ntBASIC3.71□□□□□ -1.82
SHOXO15266 Y_RNA.595-201ENST00000410403 105 ntBASIC3.71□□□□□ -1.82
SHOXO15266 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.71□□□□□ -1.82
SHOXO15266 AC019205.3-201ENST00000424573 156 ntBASIC3.71□□□□□ -1.82
SHOXO15266 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.71□□□□□ -1.82
SHOXO15266 RPS15AP5-201ENST00000436276 388 ntBASIC3.71□□□□□ -1.82
SHOXO15266 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.71□□□□□ -1.82
SHOXO15266 HMGB1P37-201ENST00000439613 609 ntBASIC3.71□□□□□ -1.82
SHOXO15266 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.71□□□□□ -1.82
SHOXO15266 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.71□□□□□ -1.82
SHOXO15266 snoU13.6-201ENST00000458785 104 ntBASIC3.71□□□□□ -1.82
SHOXO15266 RN7SL330P-201ENST00000469709 307 ntBASIC3.71□□□□□ -1.82
SHOXO15266 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.71□□□□□ -1.82
SHOXO15266 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.71□□□□□ -1.82
SHOXO15266 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.71□□□□□ -1.82
SHOXO15266 MIR4423-201ENST00000580922 80 ntBASIC3.71□□□□□ -1.82
SHOXO15266 AL356575.1-201ENST00000603008 283 ntBASIC3.71□□□□□ -1.82
SHOXO15266 AL365434.2-201ENST00000607979 234 ntBASIC3.71□□□□□ -1.82
SHOXO15266 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.71□□□□□ -1.82
SHOXO15266 MIR6853-201ENST00000619642 74 ntBASIC3.71□□□□□ -1.82
SHOXO15266 AC087385.3-201ENST00000620477 187 ntBASIC3.71□□□□□ -1.82
SHOXO15266 AC091905.2-201ENST00000623143 306 ntBASIC3.71□□□□□ -1.82
SHOXO15266 U3.53-201ENST00000628922 216 ntBASIC3.71□□□□□ -1.82
SHOXO15266 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.71□□□□□ -1.82
SHOXO15266 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
SHOXO15266 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
SHOXO15266 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SHOXO15266 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
SHOXO15266 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
SHOXO15266 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
SHOXO15266 AL079305.1-201ENST00000623159 3008 ntBASIC3.7□□□□□ -1.82
SHOXO15266 SNORA25.1-201ENST00000362326 128 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms