Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.88□□□□□ -1.79
RFXAPO00287 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.88□□□□□ -1.79
RFXAPO00287 RNU6-1301P-201ENST00000362724 104 ntBASIC3.88□□□□□ -1.79
RFXAPO00287 Y_RNA.240-201ENST00000364469 95 ntBASIC3.88□□□□□ -1.79
RFXAPO00287 Y_RNA.304-201ENST00000365011 112 ntBASIC3.88□□□□□ -1.79
RFXAPO00287 RNU6-76P-201ENST00000384060 104 ntBASIC3.88□□□□□ -1.79
RFXAPO00287 RNU6-22P-201ENST00000384355 107 ntBASIC3.88□□□□□ -1.79
RFXAPO00287 RNU6-1117P-201ENST00000384525 104 ntBASIC3.88□□□□□ -1.79
RFXAPO00287 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
RFXAPO00287 SNORD17-201ENST00000390930 237 ntBASIC3.88□□□□□ -1.79
RFXAPO00287 COTL1P1-201ENST00000422309 375 ntBASIC3.88□□□□□ -1.79
RFXAPO00287 AC008065.1-201ENST00000428525 348 ntBASIC3.88□□□□□ -1.79
RFXAPO00287 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.88□□□□□ -1.79
RFXAPO00287 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.88□□□□□ -1.79
RFXAPO00287 U8.21-201ENST00000459536 136 ntBASIC3.88□□□□□ -1.79
RFXAPO00287 AC025554.1-201ENST00000505641 188 ntBASIC3.88□□□□□ -1.79
RFXAPO00287 CASP1P1-201ENST00000526345 212 ntBASIC3.88□□□□□ -1.79
RFXAPO00287 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.88□□□□□ -1.79
RFXAPO00287 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.88□□□□□ -1.79
RFXAPO00287 AC004852.3-201ENST00000614131 326 ntBASIC3.88□□□□□ -1.79
RFXAPO00287 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.88□□□□□ -1.79
RFXAPO00287 U4.6-201ENST00000621618 127 ntBASIC3.88□□□□□ -1.79
RFXAPO00287 AL353748.2-201ENST00000622148 471 ntBASIC3.88□□□□□ -1.79
RFXAPO00287 AC097372.5-201ENST00000623665 376 ntBASIC3.88□□□□□ -1.79
RFXAPO00287 U6.106-201ENST00000636360 105 ntBASIC3.88□□□□□ -1.79
RFXAPO00287 LINC02471-203ENST00000641941 4752 ntBASIC3.88□□□□□ -1.79
RFXAPO00287 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.88□□□□□ -1.79
RFXAPO00287 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
RFXAPO00287 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RFXAPO00287 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RFXAPO00287 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
RFXAPO00287 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RFXAPO00287 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RFXAPO00287 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RFXAPO00287 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.87□□□□□ -1.79
RFXAPO00287 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
RFXAPO00287 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RFXAPO00287 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RFXAPO00287 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RFXAPO00287 RNU5A-1-201ENST00000362698 116 ntBASIC3.87□□□□□ -1.79
RFXAPO00287 RNU6-1130P-201ENST00000365434 107 ntBASIC3.87□□□□□ -1.79
RFXAPO00287 Y_RNA.418-201ENST00000384029 102 ntBASIC3.87□□□□□ -1.79
RFXAPO00287 SNORA36C-201ENST00000384289 132 ntBASIC3.87□□□□□ -1.79
RFXAPO00287 Y_RNA.504-201ENST00000384481 104 ntBASIC3.87□□□□□ -1.79
RFXAPO00287 SNORA22C-201ENST00000384614 134 ntBASIC3.87□□□□□ -1.79
RFXAPO00287 AL358453.1-201ENST00000422522 250 ntBASIC3.87□□□□□ -1.79
RFXAPO00287 AL591043.1-201ENST00000432461 424 ntBASIC3.87□□□□□ -1.79
RFXAPO00287 AC006517.1-201ENST00000480485 328 ntBASIC3.87□□□□□ -1.79
RFXAPO00287 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.87□□□□□ -1.79
RFXAPO00287 MIR4325-201ENST00000583049 90 ntBASIC3.87□□□□□ -1.79
RFXAPO00287 AL162424.1-201ENST00000602325 221 ntBASIC3.87□□□□□ -1.79
RFXAPO00287 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.87□□□□□ -1.79
RFXAPO00287 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.87□□□□□ -1.79
RFXAPO00287 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
RFXAPO00287 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
RFXAPO00287 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.86□□□□□ -1.79
RFXAPO00287 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RFXAPO00287 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
RFXAPO00287 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RFXAPO00287 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RFXAPO00287 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
RFXAPO00287 RNU4-90P-201ENST00000362773 141 ntBASIC3.86□□□□□ -1.79
RFXAPO00287 RNU6-1249P-201ENST00000363237 111 ntBASIC3.86□□□□□ -1.79
RFXAPO00287 Y_RNA.123-201ENST00000363338 102 ntBASIC3.86□□□□□ -1.79
RFXAPO00287 SNORA80A-201ENST00000363922 136 ntBASIC3.86□□□□□ -1.79
RFXAPO00287 RNU6-882P-201ENST00000391025 103 ntBASIC3.86□□□□□ -1.79
RFXAPO00287 SNORD78.2-201ENST00000391076 69 ntBASIC3.86□□□□□ -1.79
RFXAPO00287 SNORA68.2-201ENST00000391263 128 ntBASIC3.86□□□□□ -1.79
RFXAPO00287 RNU5E-9P-201ENST00000411164 104 ntBASIC3.86□□□□□ -1.79
RFXAPO00287 RPL19P1-201ENST00000411635 428 ntBASIC3.86□□□□□ -1.79
RFXAPO00287 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
RFXAPO00287 RPS26P47-201ENST00000427219 348 ntBASIC3.86□□□□□ -1.79
RFXAPO00287 RPS6P12-201ENST00000432491 726 ntBASIC3.86□□□□□ -1.79
RFXAPO00287 AC005002.2-201ENST00000438228 269 ntBASIC3.86□□□□□ -1.79
RFXAPO00287 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.86□□□□□ -1.79
RFXAPO00287 COX6CP14-201ENST00000469580 174 ntBASIC3.86□□□□□ -1.79
RFXAPO00287 AC010683.1-201ENST00000473673 378 ntBASIC3.86□□□□□ -1.79
RFXAPO00287 RPS26P21-201ENST00000475397 348 ntBASIC3.86□□□□□ -1.79
RFXAPO00287 ANXA2P1-201ENST00000505539 926 ntBASIC3.86□□□□□ -1.79
RFXAPO00287 AC023141.12-201ENST00000512399 199 ntBASIC3.86□□□□□ -1.79
RFXAPO00287 Vault.1-201ENST00000516474 102 ntBASIC3.86□□□□□ -1.79
RFXAPO00287 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.86□□□□□ -1.79
RFXAPO00287 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.86□□□□□ -1.79
RFXAPO00287 CYP4A43P-201ENST00000568156 121 ntBASIC3.86□□□□□ -1.79
RFXAPO00287 AC104581.2-201ENST00000572227 430 ntBASIC3.86□□□□□ -1.79
RFXAPO00287 MIR4308-201ENST00000580634 81 ntBASIC3.86□□□□□ -1.79
RFXAPO00287 RPL23AP78-201ENST00000599928 470 ntBASIC3.86□□□□□ -1.79
RFXAPO00287 BDH2P1-201ENST00000602288 736 ntBASIC3.86□□□□□ -1.79
RFXAPO00287 AL162274.2-201ENST00000614406 332 ntBASIC3.86□□□□□ -1.79
RFXAPO00287 AL161629.2-201ENST00000615347 275 ntBASIC3.86□□□□□ -1.79
RFXAPO00287 SDAD1P2-201ENST00000441308 2028 ntBASIC3.86□□□□□ -1.79
RFXAPO00287 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.86□□□□□ -1.79
RFXAPO00287 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RFXAPO00287 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
RFXAPO00287 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.85□□□□□ -1.79
RFXAPO00287 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RFXAPO00287 SNORD14B-201ENST00000364533 90 ntBASIC3.85□□□□□ -1.79
RFXAPO00287 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.85□□□□□ -1.79
RFXAPO00287 U3.19-201ENST00000390893 196 ntBASIC3.85□□□□□ -1.79
RFXAPO00287 AL031121.1-201ENST00000406553 254 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms