Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 RNU6-1245P-201ENST00000411130 106 ntBASIC1.46□□□□□ -2.18
SMKR1H3BMG3 AC009310.1-201ENST00000414414 451 ntBASIC1.46□□□□□ -2.18
SMKR1H3BMG3 CYCSP46-201ENST00000423569 204 ntBASIC1.46□□□□□ -2.18
SMKR1H3BMG3 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC1.46□□□□□ -2.18
SMKR1H3BMG3 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.46□□□□□ -2.18
SMKR1H3BMG3 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.46□□□□□ -2.18
SMKR1H3BMG3 KATNBL1P3-201ENST00000443475 909 ntBASIC1.46□□□□□ -2.18
SMKR1H3BMG3 MTND2P4-201ENST00000445034 1004 ntBASIC1.46□□□□□ -2.18
SMKR1H3BMG3 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.46□□□□□ -2.18
SMKR1H3BMG3 AL109933.2-201ENST00000452651 260 ntBASIC1.46□□□□□ -2.18
SMKR1H3BMG3 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.46□□□□□ -2.18
SMKR1H3BMG3 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.46□□□□□ -2.18
SMKR1H3BMG3 RNU7-182P-201ENST00000459009 62 ntBASIC1.46□□□□□ -2.18
SMKR1H3BMG3 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC1.46□□□□□ -2.18
SMKR1H3BMG3 AC022447.4-201ENST00000504053 364 ntBASIC1.46□□□□□ -2.18
SMKR1H3BMG3 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.46□□□□□ -2.18
SMKR1H3BMG3 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.46□□□□□ -2.18
SMKR1H3BMG3 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC1.46□□□□□ -2.18
SMKR1H3BMG3 RNU6-377P-201ENST00000515965 102 ntBASIC1.46□□□□□ -2.18
SMKR1H3BMG3 RNU6-991P-201ENST00000516168 107 ntBASIC1.46□□□□□ -2.18
SMKR1H3BMG3 RNU6-1178P-201ENST00000516674 107 ntBASIC1.46□□□□□ -2.18
SMKR1H3BMG3 RNU2-44P-201ENST00000516795 194 ntBASIC1.46□□□□□ -2.18
SMKR1H3BMG3 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.46□□□□□ -2.18
SMKR1H3BMG3 AP001893.2-201ENST00000526949 202 ntBASIC1.46□□□□□ -2.18
SMKR1H3BMG3 AC103987.3-201ENST00000582071 292 ntBASIC1.46□□□□□ -2.18
SMKR1H3BMG3 AL033523.1-201ENST00000605153 153 ntBASIC1.46□□□□□ -2.18
SMKR1H3BMG3 AC103810.8-201ENST00000607347 118 ntBASIC1.46□□□□□ -2.18
SMKR1H3BMG3 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.46□□□□□ -2.18
SMKR1H3BMG3 SEPT14P19-203ENST00000633205 211 ntBASIC1.46□□□□□ -2.18
SMKR1H3BMG3 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.46□□□□□ -2.18
SMKR1H3BMG3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.46□□□□□ -2.18
SMKR1H3BMG3 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.46□□□□□ -2.18
SMKR1H3BMG3 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC1.45□□□□□ -2.18
SMKR1H3BMG3 RNU6-37P-201ENST00000362692 107 ntBASIC1.45□□□□□ -2.18
SMKR1H3BMG3 RNU6-11P-201ENST00000364234 107 ntBASIC1.45□□□□□ -2.18
SMKR1H3BMG3 RNU6-7-201ENST00000364784 107 ntBASIC1.45□□□□□ -2.18
SMKR1H3BMG3 RNU6-8-201ENST00000365467 107 ntBASIC1.45□□□□□ -2.18
SMKR1H3BMG3 RNU6-25P-201ENST00000383873 107 ntBASIC1.45□□□□□ -2.18
SMKR1H3BMG3 RNU6-1-201ENST00000383898 107 ntBASIC1.45□□□□□ -2.18
SMKR1H3BMG3 RNU6-48P-201ENST00000384161 107 ntBASIC1.45□□□□□ -2.18
SMKR1H3BMG3 RNU6-36P-201ENST00000384172 107 ntBASIC1.45□□□□□ -2.18
SMKR1H3BMG3 RNU6-4P-201ENST00000384205 107 ntBASIC1.45□□□□□ -2.18
SMKR1H3BMG3 RNU6-5P-201ENST00000384238 107 ntBASIC1.45□□□□□ -2.18
SMKR1H3BMG3 RNU6-3P-201ENST00000384314 107 ntBASIC1.45□□□□□ -2.18
SMKR1H3BMG3 RNU6-16P-201ENST00000384385 107 ntBASIC1.45□□□□□ -2.18
SMKR1H3BMG3 RNU6-15P-201ENST00000384534 107 ntBASIC1.45□□□□□ -2.18
SMKR1H3BMG3 RNU6-2-201ENST00000384627 107 ntBASIC1.45□□□□□ -2.18
SMKR1H3BMG3 RNU6-29P-201ENST00000384637 107 ntBASIC1.45□□□□□ -2.18
SMKR1H3BMG3 RNU6-9-201ENST00000384776 107 ntBASIC1.45□□□□□ -2.18
SMKR1H3BMG3 RNU6-33P-201ENST00000384793 107 ntBASIC1.45□□□□□ -2.18
SMKR1H3BMG3 POLHP1-201ENST00000411806 470 ntBASIC1.45□□□□□ -2.18
SMKR1H3BMG3 AL139156.1-201ENST00000412785 841 ntBASIC1.45□□□□□ -2.18
SMKR1H3BMG3 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.45□□□□□ -2.18
SMKR1H3BMG3 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.45□□□□□ -2.18
SMKR1H3BMG3 AL365203.2-201ENST00000423444 196 ntBASIC1.45□□□□□ -2.18
SMKR1H3BMG3 AL669831.1-202ENST00000428504 417 ntBASIC1.45□□□□□ -2.18
SMKR1H3BMG3 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.45□□□□□ -2.18
SMKR1H3BMG3 HSPE1P21-201ENST00000438283 308 ntBASIC1.45□□□□□ -2.18
SMKR1H3BMG3 GTF2IP13-201ENST00000438487 386 ntBASIC1.45□□□□□ -2.18
SMKR1H3BMG3 AC243964.1-201ENST00000441814 261 ntBASIC1.45□□□□□ -2.18
SMKR1H3BMG3 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.45□□□□□ -2.18
SMKR1H3BMG3 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.45□□□□□ -2.18
SMKR1H3BMG3 RNU6-333P-201ENST00000459117 107 ntBASIC1.45□□□□□ -2.18
SMKR1H3BMG3 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.45□□□□□ -2.18
SMKR1H3BMG3 AC119751.5-201ENST00000514077 770 ntBASIC1.45□□□□□ -2.18
SMKR1H3BMG3 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.45□□□□□ -2.18
SMKR1H3BMG3 SNORD27.1-201ENST00000516319 72 ntBASIC1.45□□□□□ -2.18
SMKR1H3BMG3 AL356057.1-201ENST00000533798 831 ntBASIC1.45□□□□□ -2.18
SMKR1H3BMG3 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.45□□□□□ -2.18
SMKR1H3BMG3 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.45□□□□□ -2.18
SMKR1H3BMG3 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.45□□□□□ -2.18
SMKR1H3BMG3 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.45□□□□□ -2.18
SMKR1H3BMG3 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.45□□□□□ -2.18
SMKR1H3BMG3 AP000654.2-201ENST00000605633 586 ntBASIC1.45□□□□□ -2.18
SMKR1H3BMG3 RNU6-6P-201ENST00000606623 107 ntBASIC1.45□□□□□ -2.18
SMKR1H3BMG3 MIR98-201ENST00000606724 119 ntBASIC1.45□□□□□ -2.18
SMKR1H3BMG3 Y_RNA.783-201ENST00000613546 102 ntBASIC1.45□□□□□ -2.18
SMKR1H3BMG3 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.45□□□□□ -2.18
SMKR1H3BMG3 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.45□□□□□ -2.18
SMKR1H3BMG3 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
SMKR1H3BMG3 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
SMKR1H3BMG3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
SMKR1H3BMG3 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.44□□□□□ -2.18
SMKR1H3BMG3 AL354685.2-201ENST00000448218 1447 ntBASIC1.44□□□□□ -2.18
SMKR1H3BMG3 RNA5SP289-201ENST00000362332 137 ntBASIC1.44□□□□□ -2.18
SMKR1H3BMG3 RNA5SP171-201ENST00000391071 115 ntBASIC1.44□□□□□ -2.18
SMKR1H3BMG3 AL356967.1-201ENST00000406305 431 ntBASIC1.44□□□□□ -2.18
SMKR1H3BMG3 SNORA11.4-201ENST00000408823 129 ntBASIC1.44□□□□□ -2.18
SMKR1H3BMG3 RNA5SP184-201ENST00000411071 108 ntBASIC1.44□□□□□ -2.18
SMKR1H3BMG3 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
SMKR1H3BMG3 RPL31P63-201ENST00000422565 375 ntBASIC1.44□□□□□ -2.18
SMKR1H3BMG3 AC006946.1-201ENST00000429106 328 ntBASIC1.44□□□□□ -2.18
SMKR1H3BMG3 RPL31P35-201ENST00000431058 377 ntBASIC1.44□□□□□ -2.18
SMKR1H3BMG3 AL596276.1-201ENST00000434465 418 ntBASIC1.44□□□□□ -2.18
SMKR1H3BMG3 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.44□□□□□ -2.18
SMKR1H3BMG3 AL162395.1-201ENST00000457882 422 ntBASIC1.44□□□□□ -2.18
SMKR1H3BMG3 MTND3P5-201ENST00000512798 333 ntBASIC1.44□□□□□ -2.18
SMKR1H3BMG3 RNU4-29P-201ENST00000515943 174 ntBASIC1.44□□□□□ -2.18
SMKR1H3BMG3 RNA5SP503-201ENST00000517047 117 ntBASIC1.44□□□□□ -2.18
SMKR1H3BMG3 AC109479.2-201ENST00000517842 174 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms