Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 FCF1P10-201ENST00000407590 479 ntBASIC0.71□□□□□ -2.3
DUXBA0A1W2PPF3 AC009518.2-201ENST00000418056 731 ntBASIC0.71□□□□□ -2.3
DUXBA0A1W2PPF3 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.71□□□□□ -2.3
DUXBA0A1W2PPF3 AL591704.1-201ENST00000432574 275 ntBASIC0.71□□□□□ -2.3
DUXBA0A1W2PPF3 RSL24D1P8-201ENST00000434442 492 ntBASIC0.71□□□□□ -2.3
DUXBA0A1W2PPF3 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC0.71□□□□□ -2.3
DUXBA0A1W2PPF3 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.71□□□□□ -2.3
DUXBA0A1W2PPF3 AP000542.1-201ENST00000448473 371 ntBASIC0.71□□□□□ -2.3
DUXBA0A1W2PPF3 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
DUXBA0A1W2PPF3 SNRPFP4-201ENST00000456366 242 ntBASIC0.71□□□□□ -2.3
DUXBA0A1W2PPF3 RNA5SP269-201ENST00000459032 137 ntBASIC0.71□□□□□ -2.3
DUXBA0A1W2PPF3 RNU6-953P-201ENST00000459154 107 ntBASIC0.71□□□□□ -2.3
DUXBA0A1W2PPF3 RNU6-351P-201ENST00000516097 100 ntBASIC0.71□□□□□ -2.3
DUXBA0A1W2PPF3 CR383656.8-201ENST00000549046 145 ntBASIC0.71□□□□□ -2.3
DUXBA0A1W2PPF3 HMGB1P33-201ENST00000563485 527 ntBASIC0.71□□□□□ -2.3
DUXBA0A1W2PPF3 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.71□□□□□ -2.3
DUXBA0A1W2PPF3 AC027335.2-201ENST00000624030 375 ntBASIC0.71□□□□□ -2.3
DUXBA0A1W2PPF3 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
DUXBA0A1W2PPF3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
DUXBA0A1W2PPF3 AC245060.5-201ENST00000610778 3293 ntBASIC0.7□□□□□ -2.3
DUXBA0A1W2PPF3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.7□□□□□ -2.3
DUXBA0A1W2PPF3 MTND5P35-201ENST00000557537 1720 ntBASIC0.7□□□□□ -2.3
DUXBA0A1W2PPF3 SNORA4.3-201ENST00000365564 137 ntBASIC0.7□□□□□ -2.3
DUXBA0A1W2PPF3 FGF7P8-201ENST00000402994 292 ntBASIC0.7□□□□□ -2.3
DUXBA0A1W2PPF3 AL161935.2-201ENST00000414627 60 ntBASIC0.7□□□□□ -2.3
DUXBA0A1W2PPF3 POLR2J4-204ENST00000418424 324 ntBASIC0.7□□□□□ -2.3
DUXBA0A1W2PPF3 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.7□□□□□ -2.3
DUXBA0A1W2PPF3 PAXBP1P1-201ENST00000449315 447 ntBASIC0.7□□□□□ -2.3
DUXBA0A1W2PPF3 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
DUXBA0A1W2PPF3 RPS27AP8-201ENST00000452665 445 ntBASIC0.7□□□□□ -2.3
DUXBA0A1W2PPF3 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.7□□□□□ -2.3
DUXBA0A1W2PPF3 RNU1-131P-201ENST00000458943 161 ntBASIC0.7□□□□□ -2.3
DUXBA0A1W2PPF3 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC0.7□□□□□ -2.3
DUXBA0A1W2PPF3 AC097473.1-201ENST00000508142 408 ntBASIC0.7□□□□□ -2.3
DUXBA0A1W2PPF3 AC009646.1-201ENST00000510455 318 ntBASIC0.7□□□□□ -2.3
DUXBA0A1W2PPF3 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.7□□□□□ -2.3
DUXBA0A1W2PPF3 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.7□□□□□ -2.3
DUXBA0A1W2PPF3 RNA5SP458-201ENST00000516188 119 ntBASIC0.7□□□□□ -2.3
DUXBA0A1W2PPF3 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.7□□□□□ -2.3
DUXBA0A1W2PPF3 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.7□□□□□ -2.3
DUXBA0A1W2PPF3 DEFB130C-202ENST00000530001 230 ntBASIC0.7□□□□□ -2.3
DUXBA0A1W2PPF3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.7□□□□□ -2.3
DUXBA0A1W2PPF3 AL512310.8-201ENST00000550183 120 ntBASIC0.7□□□□□ -2.3
DUXBA0A1W2PPF3 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.7□□□□□ -2.3
DUXBA0A1W2PPF3 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.7□□□□□ -2.3
DUXBA0A1W2PPF3 MIR4769-201ENST00000584126 77 ntBASIC0.7□□□□□ -2.3
DUXBA0A1W2PPF3 AP000654.2-201ENST00000605633 586 ntBASIC0.7□□□□□ -2.3
DUXBA0A1W2PPF3 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
DUXBA0A1W2PPF3 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.7□□□□□ -2.3
DUXBA0A1W2PPF3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.7□□□□□ -2.3
DUXBA0A1W2PPF3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.69□□□□□ -2.3
DUXBA0A1W2PPF3 Y_RNA.33-201ENST00000362591 102 ntBASIC0.69□□□□□ -2.3
DUXBA0A1W2PPF3 MIR520A-201ENST00000384862 85 ntBASIC0.69□□□□□ -2.3
DUXBA0A1W2PPF3 MIR146A-201ENST00000385201 99 ntBASIC0.69□□□□□ -2.3
DUXBA0A1W2PPF3 AL357139.1-201ENST00000407792 426 ntBASIC0.69□□□□□ -2.3
DUXBA0A1W2PPF3 AL359704.1-201ENST00000411586 781 ntBASIC0.69□□□□□ -2.3
DUXBA0A1W2PPF3 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.69□□□□□ -2.3
DUXBA0A1W2PPF3 AC013410.2-201ENST00000422627 201 ntBASIC0.69□□□□□ -2.3
DUXBA0A1W2PPF3 ZNF736P7Y-201ENST00000425158 820 ntBASIC0.69□□□□□ -2.3
DUXBA0A1W2PPF3 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.69□□□□□ -2.3
DUXBA0A1W2PPF3 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.69□□□□□ -2.3
DUXBA0A1W2PPF3 AC132479.1-201ENST00000449160 144 ntBASIC0.69□□□□□ -2.3
DUXBA0A1W2PPF3 ZNF886P-201ENST00000450781 723 ntBASIC0.69□□□□□ -2.3
DUXBA0A1W2PPF3 AL583843.1-201ENST00000456070 346 ntBASIC0.69□□□□□ -2.3
DUXBA0A1W2PPF3 RNU6-333P-201ENST00000459117 107 ntBASIC0.69□□□□□ -2.3
DUXBA0A1W2PPF3 MTND1P16-201ENST00000465177 898 ntBASIC0.69□□□□□ -2.3
DUXBA0A1W2PPF3 MTND1P3-201ENST00000484956 952 ntBASIC0.69□□□□□ -2.3
DUXBA0A1W2PPF3 RNU6-1092P-201ENST00000516955 87 ntBASIC0.69□□□□□ -2.3
DUXBA0A1W2PPF3 RNU6-334P-201ENST00000517072 102 ntBASIC0.69□□□□□ -2.3
DUXBA0A1W2PPF3 RNA5SP437-201ENST00000517249 129 ntBASIC0.69□□□□□ -2.3
DUXBA0A1W2PPF3 AC087897.1-201ENST00000550134 156 ntBASIC0.69□□□□□ -2.3
DUXBA0A1W2PPF3 AL136520.1-202ENST00000555494 763 ntBASIC0.69□□□□□ -2.3
DUXBA0A1W2PPF3 AL132657.2-201ENST00000564417 358 ntBASIC0.69□□□□□ -2.3
DUXBA0A1W2PPF3 MIR4661-201ENST00000582720 75 ntBASIC0.69□□□□□ -2.3
DUXBA0A1W2PPF3 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC0.69□□□□□ -2.3
DUXBA0A1W2PPF3 AL391646.1-201ENST00000603860 190 ntBASIC0.69□□□□□ -2.3
DUXBA0A1W2PPF3 MZT1P2-201ENST00000604387 248 ntBASIC0.69□□□□□ -2.3
DUXBA0A1W2PPF3 FAM71BP1-201ENST00000604431 523 ntBASIC0.69□□□□□ -2.3
DUXBA0A1W2PPF3 BX284668.6-201ENST00000606899 438 ntBASIC0.69□□□□□ -2.3
DUXBA0A1W2PPF3 MIR6857-201ENST00000613267 93 ntBASIC0.69□□□□□ -2.3
DUXBA0A1W2PPF3 AC104985.3-201ENST00000623479 597 ntBASIC0.69□□□□□ -2.3
DUXBA0A1W2PPF3 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.69□□□□□ -2.3
DUXBA0A1W2PPF3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.68□□□□□ -2.3
DUXBA0A1W2PPF3 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
DUXBA0A1W2PPF3 snoZ40.1-201ENST00000364540 72 ntBASIC0.68□□□□□ -2.3
DUXBA0A1W2PPF3 RNU1-36P-201ENST00000365130 165 ntBASIC0.68□□□□□ -2.3
DUXBA0A1W2PPF3 SNORA75B-201ENST00000384053 137 ntBASIC0.68□□□□□ -2.3
DUXBA0A1W2PPF3 SNORA25-201ENST00000384384 134 ntBASIC0.68□□□□□ -2.3
DUXBA0A1W2PPF3 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
DUXBA0A1W2PPF3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
DUXBA0A1W2PPF3 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.68□□□□□ -2.3
DUXBA0A1W2PPF3 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.68□□□□□ -2.3
DUXBA0A1W2PPF3 EBAG9P1-201ENST00000418955 543 ntBASIC0.68□□□□□ -2.3
DUXBA0A1W2PPF3 RPS15AP12-201ENST00000419498 388 ntBASIC0.68□□□□□ -2.3
DUXBA0A1W2PPF3 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.68□□□□□ -2.3
DUXBA0A1W2PPF3 AC245047.4-201ENST00000433189 144 ntBASIC0.68□□□□□ -2.3
DUXBA0A1W2PPF3 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.68□□□□□ -2.3
DUXBA0A1W2PPF3 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.68□□□□□ -2.3
DUXBA0A1W2PPF3 AL163540.1-201ENST00000485382 386 ntBASIC0.68□□□□□ -2.3
DUXBA0A1W2PPF3 AL163195.1-201ENST00000496941 348 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 157.3 ms