| CHCHD2 | Q9Y6H1 | MIR3529-201 | ENST00000637713 | 78 nt | BASIC | 0.81 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | FKTN-204 | ENST00000448551 | 1700 nt | TSL 2 BASIC | 0.81 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | SERPINI2-209 | ENST00000616363 | 1769 nt | TSL 5 BASIC | 0.8 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | snoZ40.1-201 | ENST00000364540 | 72 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | MIR301A-201 | ENST00000385261 | 86 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | RNU6-817P-201 | ENST00000391083 | 104 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | AP000432.1-201 | ENST00000416641 | 516 nt | TSL 3 BASIC | 0.8 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | USP9YP18-201 | ENST00000425912 | 695 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | MYCBP2-AS2-201 | ENST00000428716 | 428 nt | TSL 5 BASIC | 0.8 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | LINC01680-201 | ENST00000434983 | 299 nt | TSL 2 BASIC | 0.8 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | AL138808.1-201 | ENST00000441428 | 371 nt | TSL 2 BASIC | 0.8 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | AC003988.1-201 | ENST00000447198 | 578 nt | TSL 5 BASIC | 0.8 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | SNRPGP9-201 | ENST00000456025 | 225 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | RNU6-64P-201 | ENST00000517119 | 105 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | RN7SKP256-201 | ENST00000517201 | 314 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | COPS8P3-201 | ENST00000526024 | 482 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | AC002400.1-201 | ENST00000569310 | 726 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | AP001029.2-202 | ENST00000588197 | 739 nt | TSL 3 BASIC | 0.8 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | BNIP3P30-201 | ENST00000601184 | 574 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | FAM71BP1-201 | ENST00000604431 | 523 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | RPL21P136-201 | ENST00000605378 | 396 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | AC083806.3-201 | ENST00000614016 | 455 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | AC009269.6-201 | ENST00000621778 | 588 nt | BASIC | 0.8 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | CCDC68-202 | ENST00000432185 | 4014 nt | APPRIS P1 TSL 1 (best) BASIC | 0.79 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | RNU6-655P-201 | ENST00000362858 | 107 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | SNORA70.7-201 | ENST00000384159 | 133 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | Y_RNA.578-201 | ENST00000390903 | 88 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | SNORA40C-201 | ENST00000391285 | 128 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | AL109924.3-201 | ENST00000413324 | 393 nt | TSL 2 BASIC | 0.79 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | SNRPG-202 | ENST00000413456 | 398 nt | TSL 3 BASIC | 0.79 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | GPC5-IT1-201 | ENST00000416664 | 658 nt | TSL 3 BASIC | 0.79 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | AL592466.1-201 | ENST00000428346 | 307 nt | TSL 5 BASIC | 0.79 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | MTCO1P44-201 | ENST00000441935 | 243 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | AC104137.1-201 | ENST00000503625 | 385 nt | TSL 3 BASIC | 0.79 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | RNVU1-2-201 | ENST00000516326 | 135 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | SNORA31.17-201 | ENST00000516953 | 127 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | AC018541.1-202 | ENST00000518687 | 584 nt | TSL 4 BASIC | 0.79 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | AP006587.4-201 | ENST00000526053 | 529 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | AC018630.3-201 | ENST00000542637 | 96 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | AL136038.2-201 | ENST00000553983 | 283 nt | TSL 3 BASIC | 0.79 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | MIR4698-201 | ENST00000577795 | 80 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | MIR4293-201 | ENST00000584305 | 78 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | AC100781.1-202 | ENST00000597906 | 463 nt | TSL 5 BASIC | 0.79 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | AC093648.1-201 | ENST00000623546 | 606 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | AC092656.1-203 | ENST00000624134 | 423 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | AL512643.1-201 | ENST00000635735 | 524 nt | BASIC | 0.79 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | RNU6-23P-201 | ENST00000363283 | 107 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | RNU6-487P-201 | ENST00000365430 | 104 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | MIR29B2-201 | ENST00000385055 | 81 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | RNU11-5P-201 | ENST00000391216 | 129 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | AC241644.2-201 | ENST00000426504 | 480 nt | TSL 3 BASIC | 0.78 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | NEFMP1-201 | ENST00000443423 | 1006 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | AL035666.1-201 | ENST00000446195 | 348 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | RNU6-953P-201 | ENST00000459154 | 107 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | RPS29P1-201 | ENST00000465274 | 159 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | EPGN-208 | ENST00000509145 | 222 nt | TSL 1 (best) BASIC | 0.78 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | RNU6-965P-201 | ENST00000516721 | 96 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | AC020661.3-201 | ENST00000558101 | 414 nt | TSL 3 BASIC | 0.78 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | AC066612.2-201 | ENST00000559875 | 695 nt | TSL 2 BASIC | 0.78 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | AC136618.2-201 | ENST00000575091 | 400 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | MTATP6P3-201 | ENST00000581686 | 676 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | AC099785.1-201 | ENST00000605697 | 437 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | AL161716.1-201 | ENST00000606365 | 273 nt | TSL 5 BASIC | 0.78 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | AL121890.5-201 | ENST00000620848 | 304 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | AC104985.3-201 | ENST00000623479 | 597 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | AP003485.1-201 | ENST00000625093 | 753 nt | BASIC | 0.78 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | ATF1-201 | ENST00000262053 | 2181 nt | APPRIS P1 TSL 1 (best) BASIC | 0.78 | □□□□□ -2.28 | | |
| CHCHD2 | Q9Y6H1 | AC111000.4-202 | ENST00000505646 | 2648 nt | TSL 2 BASIC | 0.77 | □□□□□ -2.29 | | |
| CHCHD2 | Q9Y6H1 | RNU6-1210P-201 | ENST00000363775 | 107 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| CHCHD2 | Q9Y6H1 | RNU6-271P-201 | ENST00000363858 | 105 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| CHCHD2 | Q9Y6H1 | RNU6-944P-201 | ENST00000364023 | 107 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| CHCHD2 | Q9Y6H1 | RNU6-743P-201 | ENST00000364151 | 106 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| CHCHD2 | Q9Y6H1 | RNU6-701P-201 | ENST00000384059 | 107 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| CHCHD2 | Q9Y6H1 | RNU6-166P-201 | ENST00000384371 | 107 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| CHCHD2 | Q9Y6H1 | RNU6-843P-201 | ENST00000384454 | 104 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| CHCHD2 | Q9Y6H1 | RNU6-278P-201 | ENST00000390945 | 109 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| CHCHD2 | Q9Y6H1 | RPL21P1-201 | ENST00000399532 | 476 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| CHCHD2 | Q9Y6H1 | CBX3P9-201 | ENST00000402326 | 552 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| CHCHD2 | Q9Y6H1 | MIR1267-201 | ENST00000408723 | 78 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| CHCHD2 | Q9Y6H1 | MTCO1P17-201 | ENST00000411522 | 491 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| CHCHD2 | Q9Y6H1 | AL359704.1-201 | ENST00000411586 | 781 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| CHCHD2 | Q9Y6H1 | UBE2V1P10-201 | ENST00000414685 | 269 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| CHCHD2 | Q9Y6H1 | AC009158.1-206 | ENST00000417476 | 454 nt | TSL 3 BASIC | 0.77 | □□□□□ -2.29 | | |
| CHCHD2 | Q9Y6H1 | AP000542.1-201 | ENST00000448473 | 371 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| CHCHD2 | Q9Y6H1 | AC003071.1-201 | ENST00000451219 | 789 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| CHCHD2 | Q9Y6H1 | RPL23AP35-201 | ENST00000451906 | 501 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| CHCHD2 | Q9Y6H1 | DUXAP8-207 | ENST00000456786 | 622 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| CHCHD2 | Q9Y6H1 | AL358176.1-201 | ENST00000457477 | 357 nt | TSL 5 BASIC | 0.77 | □□□□□ -2.29 | | |
| CHCHD2 | Q9Y6H1 | AC010409.1-201 | ENST00000487382 | 476 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| CHCHD2 | Q9Y6H1 | MTCYBP40-201 | ENST00000509390 | 1135 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| CHCHD2 | Q9Y6H1 | MTND1P36-201 | ENST00000522384 | 936 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| CHCHD2 | Q9Y6H1 | CD44-AS1-201 | ENST00000528869 | 587 nt | TSL 4 BASIC | 0.77 | □□□□□ -2.29 | | |
| CHCHD2 | Q9Y6H1 | AP003122.4-201 | ENST00000530980 | 758 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| CHCHD2 | Q9Y6H1 | AC100763.1-201 | ENST00000532735 | 522 nt | TSL 3 BASIC | 0.77 | □□□□□ -2.29 | | |
| CHCHD2 | Q9Y6H1 | TRAV32-201 | ENST00000553993 | 340 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| CHCHD2 | Q9Y6H1 | LINC01899-203 | ENST00000584810 | 337 nt | TSL 2 BASIC | 0.77 | □□□□□ -2.29 | | |
| CHCHD2 | Q9Y6H1 | AC099811.4-201 | ENST00000592536 | 496 nt | TSL 2 BASIC | 0.77 | □□□□□ -2.29 | | |
| CHCHD2 | Q9Y6H1 | AL358072.1-201 | ENST00000604156 | 575 nt | BASIC | 0.77 | □□□□□ -2.29 | | |
| CHCHD2 | Q9Y6H1 | AC005696.2-201 | ENST00000610120 | 626 nt | TSL 3 BASIC | 0.77 | □□□□□ -2.29 | | |
| CHCHD2 | Q9Y6H1 | SPTSSB-205 | ENST00000620149 | 231 nt | APPRIS P1 BASIC | 0.77 | □□□□□ -2.29 | | |