Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 MIR208B-201ENST00000401172 77 ntBASIC4.12□□□□□ -1.75
FOXD3Q9UJU5 Y_RNA.597-201ENST00000410463 100 ntBASIC4.12□□□□□ -1.75
FOXD3Q9UJU5 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.12□□□□□ -1.75
FOXD3Q9UJU5 RPS15AP5-201ENST00000436276 388 ntBASIC4.12□□□□□ -1.75
FOXD3Q9UJU5 RPS26P2-201ENST00000440331 348 ntBASIC4.12□□□□□ -1.75
FOXD3Q9UJU5 AL353748.1-201ENST00000440753 474 ntBASIC4.12□□□□□ -1.75
FOXD3Q9UJU5 snoU13.28-201ENST00000459235 104 ntBASIC4.12□□□□□ -1.75
FOXD3Q9UJU5 AC108751.2-201ENST00000469993 231 ntBASIC4.12□□□□□ -1.75
FOXD3Q9UJU5 AC091179.3-201ENST00000474761 144 ntBASIC4.12□□□□□ -1.75
FOXD3Q9UJU5 AL121594.1-201ENST00000475906 575 ntBASIC4.12□□□□□ -1.75
FOXD3Q9UJU5 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.12□□□□□ -1.75
FOXD3Q9UJU5 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC4.12□□□□□ -1.75
FOXD3Q9UJU5 AC022559.1-201ENST00000520905 205 ntBASIC4.12□□□□□ -1.75
FOXD3Q9UJU5 TRAV8-5-201ENST00000537369 341 ntBASIC4.12□□□□□ -1.75
FOXD3Q9UJU5 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
FOXD3Q9UJU5 MIR3923-201ENST00000579521 83 ntBASIC4.12□□□□□ -1.75
FOXD3Q9UJU5 RN7SL176P-201ENST00000580352 264 ntBASIC4.12□□□□□ -1.75
FOXD3Q9UJU5 AC091152.3-201ENST00000604227 325 ntBASIC4.12□□□□□ -1.75
FOXD3Q9UJU5 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
FOXD3Q9UJU5 MIR6716-201ENST00000613413 80 ntBASIC4.12□□□□□ -1.75
FOXD3Q9UJU5 U3.53-201ENST00000628922 216 ntBASIC4.12□□□□□ -1.75
FOXD3Q9UJU5 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.12□□□□□ -1.75
FOXD3Q9UJU5 AC132825.6-201ENST00000638861 357 ntBASIC4.12□□□□□ -1.75
FOXD3Q9UJU5 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.12□□□□□ -1.75
FOXD3Q9UJU5 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
FOXD3Q9UJU5 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
FOXD3Q9UJU5 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.12□□□□□ -1.75
FOXD3Q9UJU5 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
FOXD3Q9UJU5 AC092593.1-201ENST00000515413 1815 ntBASIC4.11□□□□□ -1.75
FOXD3Q9UJU5 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
FOXD3Q9UJU5 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
FOXD3Q9UJU5 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
FOXD3Q9UJU5 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC4.11□□□□□ -1.75
FOXD3Q9UJU5 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
FOXD3Q9UJU5 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
FOXD3Q9UJU5 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.11□□□□□ -1.75
FOXD3Q9UJU5 Y_RNA.262-201ENST00000364641 102 ntBASIC4.11□□□□□ -1.75
FOXD3Q9UJU5 SNORA18.3-201ENST00000384122 132 ntBASIC4.11□□□□□ -1.75
FOXD3Q9UJU5 ELOCP21-201ENST00000412558 336 ntBASIC4.11□□□□□ -1.75
FOXD3Q9UJU5 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC4.11□□□□□ -1.75
FOXD3Q9UJU5 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.11□□□□□ -1.75
FOXD3Q9UJU5 TMSB4XP3-201ENST00000445144 114 ntBASIC4.11□□□□□ -1.75
FOXD3Q9UJU5 IFNA11P-201ENST00000446352 526 ntBASIC4.11□□□□□ -1.75
FOXD3Q9UJU5 AP002884.2-201ENST00000471647 395 ntBASIC4.11□□□□□ -1.75
FOXD3Q9UJU5 RNU5F-2P-201ENST00000516066 82 ntBASIC4.11□□□□□ -1.75
FOXD3Q9UJU5 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.11□□□□□ -1.75
FOXD3Q9UJU5 ATP5J2P6-201ENST00000565203 266 ntBASIC4.11□□□□□ -1.75
FOXD3Q9UJU5 AC055872.1-201ENST00000570978 278 ntBASIC4.11□□□□□ -1.75
FOXD3Q9UJU5 RPL7P50-201ENST00000600588 727 ntBASIC4.11□□□□□ -1.75
FOXD3Q9UJU5 AL162713.1-201ENST00000604480 262 ntBASIC4.11□□□□□ -1.75
FOXD3Q9UJU5 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.11□□□□□ -1.75
FOXD3Q9UJU5 AL138880.2-201ENST00000616214 239 ntBASIC4.11□□□□□ -1.75
FOXD3Q9UJU5 MIR6830-201ENST00000636015 70 ntBASIC4.11□□□□□ -1.75
FOXD3Q9UJU5 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
FOXD3Q9UJU5 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC4.11□□□□□ -1.75
FOXD3Q9UJU5 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
FOXD3Q9UJU5 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.11□□□□□ -1.75
FOXD3Q9UJU5 AL133383.2-201ENST00000622958 2336 ntBASIC4.11□□□□□ -1.75
FOXD3Q9UJU5 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
FOXD3Q9UJU5 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
FOXD3Q9UJU5 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
FOXD3Q9UJU5 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.1□□□□□ -1.75
FOXD3Q9UJU5 AC008725.1-201ENST00000605123 2263 ntBASIC4.1□□□□□ -1.75
FOXD3Q9UJU5 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.1□□□□□ -1.75
FOXD3Q9UJU5 RNU6-1010P-201ENST00000362757 107 ntBASIC4.1□□□□□ -1.75
FOXD3Q9UJU5 Y_RNA.304-201ENST00000365011 112 ntBASIC4.1□□□□□ -1.75
FOXD3Q9UJU5 MIR921-201ENST00000401133 56 ntBASIC4.1□□□□□ -1.75
FOXD3Q9UJU5 Z74021.1-201ENST00000423610 407 ntBASIC4.1□□□□□ -1.75
FOXD3Q9UJU5 AL714022.1-201ENST00000439897 151 ntBASIC4.1□□□□□ -1.75
FOXD3Q9UJU5 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.1□□□□□ -1.75
FOXD3Q9UJU5 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
FOXD3Q9UJU5 SCARNA10-201ENST00000459255 330 ntBASIC4.1□□□□□ -1.75
FOXD3Q9UJU5 snoU13.14-201ENST00000459372 104 ntBASIC4.1□□□□□ -1.75
FOXD3Q9UJU5 RPL7AP28-201ENST00000464513 571 ntBASIC4.1□□□□□ -1.75
FOXD3Q9UJU5 AC011276.1-201ENST00000469688 323 ntBASIC4.1□□□□□ -1.75
FOXD3Q9UJU5 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
FOXD3Q9UJU5 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC4.1□□□□□ -1.75
FOXD3Q9UJU5 AL034555.1-201ENST00000604816 211 ntBASIC4.1□□□□□ -1.75
FOXD3Q9UJU5 AC004467.1-201ENST00000615678 330 ntBASIC4.1□□□□□ -1.75
FOXD3Q9UJU5 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.1□□□□□ -1.75
FOXD3Q9UJU5 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
FOXD3Q9UJU5 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
FOXD3Q9UJU5 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
FOXD3Q9UJU5 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
FOXD3Q9UJU5 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
FOXD3Q9UJU5 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
FOXD3Q9UJU5 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
FOXD3Q9UJU5 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.09□□□□□ -1.75
FOXD3Q9UJU5 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
FOXD3Q9UJU5 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.09□□□□□ -1.75
FOXD3Q9UJU5 SCN1A-220ENST00000641603 12506 ntBASIC4.09□□□□□ -1.75
FOXD3Q9UJU5 RNU1-94P-201ENST00000362627 173 ntBASIC4.09□□□□□ -1.75
FOXD3Q9UJU5 Y_RNA.170-201ENST00000363746 110 ntBASIC4.09□□□□□ -1.75
FOXD3Q9UJU5 RNA5SP509-201ENST00000364577 119 ntBASIC4.09□□□□□ -1.75
FOXD3Q9UJU5 SNORA40.19-201ENST00000390846 128 ntBASIC4.09□□□□□ -1.75
FOXD3Q9UJU5 AC023141.4-201ENST00000412031 328 ntBASIC4.09□□□□□ -1.75
FOXD3Q9UJU5 AL356387.2-201ENST00000422272 243 ntBASIC4.09□□□□□ -1.75
FOXD3Q9UJU5 AC011998.1-201ENST00000433403 117 ntBASIC4.09□□□□□ -1.75
FOXD3Q9UJU5 RNU7-23P-201ENST00000459465 62 ntBASIC4.09□□□□□ -1.75
FOXD3Q9UJU5 AC091021.1-201ENST00000468051 388 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms