Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CPSF2Q9P2I0 AC005336.3-201ENST00000623833 2679 ntBASIC2.6□□□□□ -1.99
CPSF2Q9P2I0 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.6□□□□□ -1.99
CPSF2Q9P2I0 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.6□□□□□ -1.99
CPSF2Q9P2I0 SNORD56.1-201ENST00000362913 68 ntBASIC2.6□□□□□ -1.99
CPSF2Q9P2I0 RNU6-623P-201ENST00000363143 105 ntBASIC2.6□□□□□ -1.99
CPSF2Q9P2I0 AL606923.1-201ENST00000406616 190 ntBASIC2.6□□□□□ -1.99
CPSF2Q9P2I0 MTCO3P41-201ENST00000414801 328 ntBASIC2.6□□□□□ -1.99
CPSF2Q9P2I0 CYCSP48-201ENST00000417124 323 ntBASIC2.6□□□□□ -1.99
CPSF2Q9P2I0 AL589823.1-201ENST00000429577 183 ntBASIC2.6□□□□□ -1.99
CPSF2Q9P2I0 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC2.6□□□□□ -1.99
CPSF2Q9P2I0 AL135938.1-201ENST00000443141 297 ntBASIC2.6□□□□□ -1.99
CPSF2Q9P2I0 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.6□□□□□ -1.99
CPSF2Q9P2I0 RPS3AP12-201ENST00000443616 753 ntBASIC2.6□□□□□ -1.99
CPSF2Q9P2I0 RNU6-261P-201ENST00000459506 102 ntBASIC2.6□□□□□ -1.99
CPSF2Q9P2I0 SRRM1P2-201ENST00000464531 1192 ntBASIC2.6□□□□□ -1.99
CPSF2Q9P2I0 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.6□□□□□ -1.99
CPSF2Q9P2I0 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.6□□□□□ -1.99
CPSF2Q9P2I0 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.6□□□□□ -1.99
CPSF2Q9P2I0 AC022880.1-201ENST00000534017 973 ntBASIC2.6□□□□□ -1.99
CPSF2Q9P2I0 AC023050.3-201ENST00000541142 333 ntBASIC2.6□□□□□ -1.99
CPSF2Q9P2I0 AC079600.2-201ENST00000550076 130 ntBASIC2.6□□□□□ -1.99
CPSF2Q9P2I0 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.6□□□□□ -1.99
CPSF2Q9P2I0 AC073410.2-201ENST00000603240 332 ntBASIC2.6□□□□□ -1.99
CPSF2Q9P2I0 AC009233.1-201ENST00000616477 371 ntBASIC2.6□□□□□ -1.99
CPSF2Q9P2I0 U4.7-201ENST00000638126 106 ntBASIC2.6□□□□□ -1.99
CPSF2Q9P2I0 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CPSF2Q9P2I0 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.6□□□□□ -1.99
CPSF2Q9P2I0 RNU6-1085P-201ENST00000363576 107 ntBASIC2.59□□□□□ -1.99
CPSF2Q9P2I0 RNU1-57P-201ENST00000384491 166 ntBASIC2.59□□□□□ -1.99
CPSF2Q9P2I0 SNORA44-201ENST00000384584 132 ntBASIC2.59□□□□□ -1.99
CPSF2Q9P2I0 AL356057.3-201ENST00000402607 340 ntBASIC2.59□□□□□ -1.99
CPSF2Q9P2I0 RNA5SP21-201ENST00000410917 96 ntBASIC2.59□□□□□ -1.99
CPSF2Q9P2I0 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.59□□□□□ -1.99
CPSF2Q9P2I0 AC008267.5-201ENST00000424928 265 ntBASIC2.59□□□□□ -1.99
CPSF2Q9P2I0 MTND1P1-201ENST00000445453 368 ntBASIC2.59□□□□□ -1.99
CPSF2Q9P2I0 AL031659.1-201ENST00000447075 539 ntBASIC2.59□□□□□ -1.99
CPSF2Q9P2I0 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.59□□□□□ -1.99
CPSF2Q9P2I0 AC090515.1-201ENST00000465295 476 ntBASIC2.59□□□□□ -1.99
CPSF2Q9P2I0 RPL23AP45-201ENST00000476406 468 ntBASIC2.59□□□□□ -1.99
CPSF2Q9P2I0 AC140059.1-201ENST00000489238 361 ntBASIC2.59□□□□□ -1.99
CPSF2Q9P2I0 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.59□□□□□ -1.99
CPSF2Q9P2I0 MTND4P7-201ENST00000523876 130 ntBASIC2.59□□□□□ -1.99
CPSF2Q9P2I0 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.59□□□□□ -1.99
CPSF2Q9P2I0 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.59□□□□□ -1.99
CPSF2Q9P2I0 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.59□□□□□ -1.99
CPSF2Q9P2I0 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.59□□□□□ -1.99
CPSF2Q9P2I0 U2.17-201ENST00000611454 95 ntBASIC2.59□□□□□ -1.99
CPSF2Q9P2I0 AC087241.4-201ENST00000612441 480 ntBASIC2.59□□□□□ -1.99
CPSF2Q9P2I0 HULC.1-201ENST00000612720 240 ntBASIC2.59□□□□□ -1.99
CPSF2Q9P2I0 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CPSF2Q9P2I0 AC015540.1-201ENST00000615828 501 ntBASIC2.59□□□□□ -1.99
CPSF2Q9P2I0 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.58□□□□□ -2
CPSF2Q9P2I0 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.58□□□□□ -2
CPSF2Q9P2I0 AL596028.1-201ENST00000326971 197 ntBASIC2.58□□□□□ -2
CPSF2Q9P2I0 SNORA69-201ENST00000383895 132 ntBASIC2.58□□□□□ -2
CPSF2Q9P2I0 SNORA6-201ENST00000384033 151 ntBASIC2.58□□□□□ -2
CPSF2Q9P2I0 Y_RNA.481-201ENST00000384373 102 ntBASIC2.58□□□□□ -2
CPSF2Q9P2I0 RNU6-780P-201ENST00000391030 104 ntBASIC2.58□□□□□ -2
CPSF2Q9P2I0 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.58□□□□□ -2
CPSF2Q9P2I0 USP9YP20-201ENST00000419224 558 ntBASIC2.58□□□□□ -2
CPSF2Q9P2I0 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.58□□□□□ -2
CPSF2Q9P2I0 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.58□□□□□ -2
CPSF2Q9P2I0 PSPHP1-201ENST00000450062 261 ntBASIC2.58□□□□□ -2
CPSF2Q9P2I0 RPL23AP49-201ENST00000492925 468 ntBASIC2.58□□□□□ -2
CPSF2Q9P2I0 AC019235.1-201ENST00000503847 207 ntBASIC2.58□□□□□ -2
CPSF2Q9P2I0 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.58□□□□□ -2
CPSF2Q9P2I0 RNU6-835P-201ENST00000516974 104 ntBASIC2.58□□□□□ -2
CPSF2Q9P2I0 CKS1BP7-201ENST00000522230 235 ntBASIC2.58□□□□□ -2
CPSF2Q9P2I0 CBX3P7-201ENST00000532876 502 ntBASIC2.58□□□□□ -2
CPSF2Q9P2I0 AC090115.3-201ENST00000553218 849 ntBASIC2.58□□□□□ -2
CPSF2Q9P2I0 AC245505.1-201ENST00000556398 224 ntBASIC2.58□□□□□ -2
CPSF2Q9P2I0 AC027176.1-201ENST00000560204 514 ntBASIC2.58□□□□□ -2
CPSF2Q9P2I0 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.58□□□□□ -2
CPSF2Q9P2I0 AL713866.2-201ENST00000603579 219 ntBASIC2.58□□□□□ -2
CPSF2Q9P2I0 AC093732.2-201ENST00000607950 274 ntBASIC2.58□□□□□ -2
CPSF2Q9P2I0 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.58□□□□□ -2
CPSF2Q9P2I0 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CPSF2Q9P2I0 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.58□□□□□ -2
CPSF2Q9P2I0 MIR186-201ENST00000384988 86 ntBASIC2.57□□□□□ -2
CPSF2Q9P2I0 SNORD37.1-201ENST00000390968 65 ntBASIC2.57□□□□□ -2
CPSF2Q9P2I0 RNA5SP390-201ENST00000410191 113 ntBASIC2.57□□□□□ -2
CPSF2Q9P2I0 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.57□□□□□ -2
CPSF2Q9P2I0 SNORD56-201ENST00000413522 71 ntBASIC2.57□□□□□ -2
CPSF2Q9P2I0 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.57□□□□□ -2
CPSF2Q9P2I0 MTND1P23-201ENST00000416931 372 ntBASIC2.57□□□□□ -2
CPSF2Q9P2I0 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.57□□□□□ -2
CPSF2Q9P2I0 AC011816.1-201ENST00000441346 546 ntBASIC2.57□□□□□ -2
CPSF2Q9P2I0 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.57□□□□□ -2
CPSF2Q9P2I0 AC117503.1-201ENST00000472241 394 ntBASIC2.57□□□□□ -2
CPSF2Q9P2I0 AC009646.1-201ENST00000510455 318 ntBASIC2.57□□□□□ -2
CPSF2Q9P2I0 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.57□□□□□ -2
CPSF2Q9P2I0 Y_RNA.693-201ENST00000516641 110 ntBASIC2.57□□□□□ -2
CPSF2Q9P2I0 AC109329.1-201ENST00000518744 317 ntBASIC2.57□□□□□ -2
CPSF2Q9P2I0 AP005902.1-201ENST00000521358 186 ntBASIC2.57□□□□□ -2
CPSF2Q9P2I0 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.57□□□□□ -2
CPSF2Q9P2I0 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.57□□□□□ -2
CPSF2Q9P2I0 AL133241.1-201ENST00000556832 487 ntBASIC2.57□□□□□ -2
CPSF2Q9P2I0 APOOP1-201ENST00000604695 592 ntBASIC2.57□□□□□ -2
CPSF2Q9P2I0 AL138963.2-201ENST00000605137 226 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms