Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.04□□□□□ -1.76
PDLIM7Q9NR12 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
PDLIM7Q9NR12 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
PDLIM7Q9NR12 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PDLIM7Q9NR12 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.04□□□□□ -1.76
PDLIM7Q9NR12 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PDLIM7Q9NR12 AP000560.1-201ENST00000624150 1937 ntBASIC4.03□□□□□ -1.76
PDLIM7Q9NR12 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
PDLIM7Q9NR12 AC027290.2-201ENST00000623210 18662 ntBASIC4.03□□□□□ -1.76
PDLIM7Q9NR12 RNU4-35P-201ENST00000362588 141 ntBASIC4.03□□□□□ -1.76
PDLIM7Q9NR12 RNU6-611P-201ENST00000384276 104 ntBASIC4.03□□□□□ -1.76
PDLIM7Q9NR12 RNU6-130P-201ENST00000411112 103 ntBASIC4.03□□□□□ -1.76
PDLIM7Q9NR12 TOMM20P4-201ENST00000427861 435 ntBASIC4.03□□□□□ -1.76
PDLIM7Q9NR12 AC007919.1-201ENST00000429380 217 ntBASIC4.03□□□□□ -1.76
PDLIM7Q9NR12 MTND3P9-201ENST00000429526 346 ntBASIC4.03□□□□□ -1.76
PDLIM7Q9NR12 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.03□□□□□ -1.76
PDLIM7Q9NR12 RPEP5-201ENST00000441137 268 ntBASIC4.03□□□□□ -1.76
PDLIM7Q9NR12 HIGD1AP2-201ENST00000446367 280 ntBASIC4.03□□□□□ -1.76
PDLIM7Q9NR12 AL590664.1-201ENST00000448065 339 ntBASIC4.03□□□□□ -1.76
PDLIM7Q9NR12 RPS20P22-201ENST00000473700 357 ntBASIC4.03□□□□□ -1.76
PDLIM7Q9NR12 TRBVB-201ENST00000477100 408 ntBASIC4.03□□□□□ -1.76
PDLIM7Q9NR12 RPL21P13-201ENST00000488305 481 ntBASIC4.03□□□□□ -1.76
PDLIM7Q9NR12 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.03□□□□□ -1.76
PDLIM7Q9NR12 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.03□□□□□ -1.76
PDLIM7Q9NR12 AK3P2-201ENST00000507976 429 ntBASIC4.03□□□□□ -1.76
PDLIM7Q9NR12 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.03□□□□□ -1.76
PDLIM7Q9NR12 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.03□□□□□ -1.76
PDLIM7Q9NR12 EIF4BP1-201ENST00000554881 351 ntBASIC4.03□□□□□ -1.76
PDLIM7Q9NR12 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.03□□□□□ -1.76
PDLIM7Q9NR12 AL360157.1-201ENST00000565962 87 ntBASIC4.03□□□□□ -1.76
PDLIM7Q9NR12 AC012433.1-201ENST00000588916 398 ntBASIC4.03□□□□□ -1.76
PDLIM7Q9NR12 AC008121.1-201ENST00000603244 268 ntBASIC4.03□□□□□ -1.76
PDLIM7Q9NR12 MIR7851-201ENST00000610611 160 ntBASIC4.03□□□□□ -1.76
PDLIM7Q9NR12 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PDLIM7Q9NR12 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.03□□□□□ -1.76
PDLIM7Q9NR12 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PDLIM7Q9NR12 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.03□□□□□ -1.76
PDLIM7Q9NR12 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PDLIM7Q9NR12 AF127577.6-201ENST00000623352 2191 ntBASIC4.03□□□□□ -1.76
PDLIM7Q9NR12 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
PDLIM7Q9NR12 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PDLIM7Q9NR12 AF117829.1-206ENST00000621883 3802 ntBASIC4.02□□□□□ -1.77
PDLIM7Q9NR12 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
PDLIM7Q9NR12 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
PDLIM7Q9NR12 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PDLIM7Q9NR12 SNORD50.1-201ENST00000362987 71 ntBASIC4.02□□□□□ -1.77
PDLIM7Q9NR12 U3.6-201ENST00000363622 211 ntBASIC4.02□□□□□ -1.77
PDLIM7Q9NR12 Y_RNA.183-201ENST00000363882 113 ntBASIC4.02□□□□□ -1.77
PDLIM7Q9NR12 Y_RNA.518-201ENST00000384552 113 ntBASIC4.02□□□□□ -1.77
PDLIM7Q9NR12 U3.19-201ENST00000390893 196 ntBASIC4.02□□□□□ -1.77
PDLIM7Q9NR12 UBA52P6-201ENST00000399822 382 ntBASIC4.02□□□□□ -1.77
PDLIM7Q9NR12 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.02□□□□□ -1.77
PDLIM7Q9NR12 RNU6-121P-201ENST00000410525 99 ntBASIC4.02□□□□□ -1.77
PDLIM7Q9NR12 RN7SKP53-201ENST00000411337 315 ntBASIC4.02□□□□□ -1.77
PDLIM7Q9NR12 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.02□□□□□ -1.77
PDLIM7Q9NR12 RPL21P38-201ENST00000418090 167 ntBASIC4.02□□□□□ -1.77
PDLIM7Q9NR12 AL627311.1-201ENST00000431514 115 ntBASIC4.02□□□□□ -1.77
PDLIM7Q9NR12 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.02□□□□□ -1.77
PDLIM7Q9NR12 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.02□□□□□ -1.77
PDLIM7Q9NR12 AC025518.1-201ENST00000479856 347 ntBASIC4.02□□□□□ -1.77
PDLIM7Q9NR12 RPL30P10-201ENST00000488148 337 ntBASIC4.02□□□□□ -1.77
PDLIM7Q9NR12 AC025465.3-201ENST00000510570 311 ntBASIC4.02□□□□□ -1.77
PDLIM7Q9NR12 VWA8P1-201ENST00000510889 176 ntBASIC4.02□□□□□ -1.77
PDLIM7Q9NR12 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.02□□□□□ -1.77
PDLIM7Q9NR12 RNU6-612P-201ENST00000516909 102 ntBASIC4.02□□□□□ -1.77
PDLIM7Q9NR12 RNA5SP290-201ENST00000517133 127 ntBASIC4.02□□□□□ -1.77
PDLIM7Q9NR12 MIR4325-201ENST00000583049 90 ntBASIC4.02□□□□□ -1.77
PDLIM7Q9NR12 AC009318.2-201ENST00000610917 651 ntBASIC4.02□□□□□ -1.77
PDLIM7Q9NR12 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.02□□□□□ -1.77
PDLIM7Q9NR12 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.02□□□□□ -1.77
PDLIM7Q9NR12 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PDLIM7Q9NR12 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
PDLIM7Q9NR12 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
PDLIM7Q9NR12 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
PDLIM7Q9NR12 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PDLIM7Q9NR12 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.02□□□□□ -1.77
PDLIM7Q9NR12 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PDLIM7Q9NR12 AC087190.4-201ENST00000574616 8334 ntBASIC4.01□□□□□ -1.77
PDLIM7Q9NR12 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PDLIM7Q9NR12 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
PDLIM7Q9NR12 RNU6-212P-201ENST00000362642 104 ntBASIC4.01□□□□□ -1.77
PDLIM7Q9NR12 RNA5SP295-201ENST00000362655 121 ntBASIC4.01□□□□□ -1.77
PDLIM7Q9NR12 RNU1-76P-201ENST00000362903 159 ntBASIC4.01□□□□□ -1.77
PDLIM7Q9NR12 SNORD6-201ENST00000365444 73 ntBASIC4.01□□□□□ -1.77
PDLIM7Q9NR12 RAC1P3-201ENST00000416129 580 ntBASIC4.01□□□□□ -1.77
PDLIM7Q9NR12 RN7SL93P-201ENST00000463035 293 ntBASIC4.01□□□□□ -1.77
PDLIM7Q9NR12 SNRPGP3-201ENST00000469405 227 ntBASIC4.01□□□□□ -1.77
PDLIM7Q9NR12 AC098869.1-201ENST00000481627 292 ntBASIC4.01□□□□□ -1.77
PDLIM7Q9NR12 AC139453.3-201ENST00000493276 369 ntBASIC4.01□□□□□ -1.77
PDLIM7Q9NR12 SNORA70.16-201ENST00000516390 95 ntBASIC4.01□□□□□ -1.77
PDLIM7Q9NR12 RNU6-111P-201ENST00000517179 105 ntBASIC4.01□□□□□ -1.77
PDLIM7Q9NR12 AC004024.1-201ENST00000549244 247 ntBASIC4.01□□□□□ -1.77
PDLIM7Q9NR12 AC073410.2-201ENST00000603240 332 ntBASIC4.01□□□□□ -1.77
PDLIM7Q9NR12 AC008962.1-201ENST00000605729 304 ntBASIC4.01□□□□□ -1.77
PDLIM7Q9NR12 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC4.01□□□□□ -1.77
PDLIM7Q9NR12 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.01□□□□□ -1.77
PDLIM7Q9NR12 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PDLIM7Q9NR12 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PDLIM7Q9NR12 Z75746.1-201ENST00000440243 2080 ntBASIC4.01□□□□□ -1.77
PDLIM7Q9NR12 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms